For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRRVHDWFLHRGLPLVLTRRVRARKLVQRSAPMVSAVGALTAVTMLLADVTGESPDYGYAVRLGGIAVVL VAAPFVLEVLHRLGTRVGEALRRWAAVLVMTIFVVVMPLTVSGWSGAAAAEAPAFILISLTAIWLTYLGF GSIALWAFRFAWVQLGALGTLMSRALPLLMLTVVVYFTGELWQLSARMTRERLWQTIGFLSIVALVFMIA TIRDEVGALRQDRSAREDPAALLVGTPLESVRADPATRTPLSMAEQANVVAVMVVAQAIQVVLFTAGLFA FFLALGVIAIPDDVTVVWSGEQACAVGEPPCAGTWFGVHIPIPQTVVHTSLFVAVLSGLYFTVSTSVDPL YRQRFFDPLIADVAVSLAGRDAYLEVERHQTRHG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3454 | - | - | 100% (384) | hypothetical protein Mvan_3454 |
M. vanbaalenii PYR-1 | Mvan_3452 | - | 1e-47 | 31.58% (380) | hypothetical protein Mvan_3452 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2137 | - | 1e-37 | 30.08% (379) | integral membrane protein |
M. gilvum PYR-GCK | Mflv_3072 | - | 0.0 | 87.00% (377) | hypothetical protein Mflv_3072 |
M. tuberculosis H37Rv | Rv2113 | - | 5e-38 | 30.08% (379) | integral membrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_3089 | - | 7e-44 | 30.32% (376) | integral membrane protein |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2335 | - | 2e-30 | 27.60% (279) | integral membrane protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3089|M.marinum_M MNPSPHRAPARRDPSSAAAESWFLERGLPAVLTRRARWRRLWSRSAPVLA MUL_2335|M.ulcerans_Agy99 -----------------------------------------MSRHEPFPA Mb2137|M.bovis_AF2122/97 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLA Rv2113|M.tuberculosis_H37Rv MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLA Mvan_3454|M.vanbaalenii_PYR-1 ---------------MRRVHDWFLHRGLPLVLTRRVRARKLVQRSAPMVS Mflv_3072|M.gilvum_PYR-GCK ---------MCPVSDMRPVHDWFLQRGLPLVLPRRVRARKLVQRSAPMVS * *. : MMAR_3089|M.marinum_M AYATLHCWTLPILLITHGDEVVIDGQPTPREWVLVTLVAIAPVLITFVGW MUL_2335|M.ulcerans_Agy99 PRS---------------------GTPRPVECRGGKLVS---------GT Mb2137|M.bovis_AF2122/97 AWAVVEGCLMAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGW Rv2113|M.tuberculosis_H37Rv AWAVVEGCLMAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGW Mvan_3454|M.vanbaalenii_PYR-1 AVGALTAVTMLLADVTGESPDYGYAVRLGGIAVVLVAAPFVLEVLHRLGT Mflv_3072|M.gilvum_PYR-GCK AVGALTAVTMLLADVTGSDPDYGYAVRLGAIAVILIAAPFALEILHRLGT . . . . * MMAR_3089|M.marinum_M LVSRLSDSRMRSVAATVAVSLVAIVLIVET--SVSHLPDAALAAVMVLLL MUL_2335|M.ulcerans_Agy99 GLARGAD-QAGPLAATVAVSLVAIVLIVET--SVSHLPDAALAAVMVLLL Mb2137|M.bovis_AF2122/97 LVSQISSGRGQAAVATMAVAFAAASDVIES--GPIQLLRTAVVVGLVLLQ Rv2113|M.tuberculosis_H37Rv LVSQISSGRGQAAVATMAVAFAAASDVIES--GPIQLLRTAVVVGLVLLQ Mvan_3454|M.vanbaalenii_PYR-1 RVGEALRRWAAVLVMTIFVVVMPLTVSGWSGAAAAEAPAFILISLTAIWL Mflv_3072|M.gilvum_PYR-GCK RMGEALRRWAALLVMTIFVVIMPLTVSGWSGTAAAEAPVFIVISLLAVWL :.. . *: * . . : . . : .: MMAR_3089|M.marinum_M TGSGIGSVTGWSVRMTLSHLATIGALAVRALPVVLLTTLVFFNSNIWLMA MUL_2335|M.ulcerans_Agy99 TGSGIGSVTGWSVRMTLSHLATIGALAVRALPVVLLTTLVFFNSNIWLMA Mb2137|M.bovis_AF2122/97 TGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWLMA Rv2113|M.tuberculosis_H37Rv TGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWLMA Mvan_3454|M.vanbaalenii_PYR-1 TYLGFGSIALWAFRFAWVQLGALGTLMSRALPLLMLTVVVYFTGELWQLS Mflv_3072|M.gilvum_PYR-GCK TYLGFGSIALWAFRFAWVQVGALGTLMSRALPLLMLTVVVYFTGELWQLS * *.**: *:.*:: ::.::*:* ****:::**.:*:*. :* :: MMAR_3089|M.marinum_M STISAERLALAIAFLVGIASVFVISTTAERVKPMLQAPTVQPK-NCQELA MUL_2335|M.ulcerans_Agy99 STISAERLALAIAFLVGIASVFVISTTAERVKPMLQAPTVQPK-NCQELA Mb2137|M.bovis_AF2122/97 ANINGERLPLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQ-GSQSLA Rv2113|M.tuberculosis_H37Rv ANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQ-GSQSLA Mvan_3454|M.vanbaalenii_PYR-1 ARMTRERLWQTIGFLSIVALVFMIATIRDEVGALRQDRSARED-PAALLV Mflv_3072|M.gilvum_PYR-GCK ARMSRERLWQTIGFLSLVALLFMVATIRDEVRALRQERSERDDDATALLE : :. *** :: ** :* *:::. :.* .: : : . * MMAR_3089|M.marinum_M DTPFAAMPD-PPSSRPLTRAERANVVFVLTAHQLVQIMVVAMLTATIYVI MUL_2335|M.ulcerans_Agy99 DTPFAAMPD-PPSSRPLTRAERANVVFVLTAHQLVQIMVVAMLTATIYVI Mb2137|M.bovis_AF2122/97 GTPFATMGD-PSPGFPLTRAERLNVVFLLAALQLVEILVVASVGAAIYLV Rv2113|M.tuberculosis_H37Rv GTPFATMGD-PSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLV Mvan_3454|M.vanbaalenii_PYR-1 GTPLESVRADPATRTPLSMAEQANVVAVMVVAQAIQVVLFTAGLFAFFLA Mflv_3072|M.gilvum_PYR-GCK DTPLASIHTGPAARTPLSLAEQANVVAVMVVAQAIQVVLFTAGLFVFFLA .**: :: *.. **: **: *** ::.. * :::::.: .::: MMAR_3089|M.marinum_M LGLIVLSPALLQEWSHNVSSNA-------TVLGLTVPVPDSLIHLCLFIG MUL_2335|M.ulcerans_Agy99 LELIVLSPALLQEWSHNVSSNA-------TVLGLTVPVPDSLIHLCLFIG Mb2137|M.bovis_AF2122/97 LGMIILTPPLLREWTHYDSMTT-------TVLGMTFPAPDSLIRMCLFLG Rv2113|M.tuberculosis_H37Rv LGMIILTPPLLREWTHYDSMTT-------TVLGMTFPAPDSLIRMCLFLG Mvan_3454|M.vanbaalenii_PYR-1 LGVIAIPDDVTVVWSGEQACAVGEPPCAGTWFGVHIPIPQTVVHTSLFVA Mflv_3072|M.gilvum_PYR-GCK LGMIAIPDDVTVLWSSEQTCAVGEPPCAGTWFGVHIPIPQTVVHMSLFVA * :* :. : *: : . * :*: .* *::::: .**:. MMAR_3089|M.marinum_M ALTFMYISARAVGDAEYRATFVDPLIENLHITLIARGRYRANIDDT---D MUL_2335|M.ulcerans_Agy99 ALTFMYISARAVGDAEYRATFVDPLIENLHITLIAPGRYGANIDDT---D Mb2137|M.bovis_AF2122/97 ALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVVTAPCAG Rv2113|M.tuberculosis_H37Rv ALTFMYISARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVVTAPCAG Mvan_3454|M.vanbaalenii_PYR-1 VLSGLYFTVSTSVDPLYRQRFFDPLIADVAVSLAGRDAYLEVERHQTRHG Mflv_3072|M.gilvum_PYR-GCK VLSGLYFTVSTSVDPLYRERFFEPLIGDVAVSLAGRDAYRAVGQPDRFTA .*: :*::. : *. ** *.:*** :: :* . . * MMAR_3089|M.marinum_M VDASPGGD MUL_2335|M.ulcerans_Agy99 VDASPGGD Mb2137|M.bovis_AF2122/97 VDAGHVDD Rv2113|M.tuberculosis_H37Rv VDAGHVDD Mvan_3454|M.vanbaalenii_PYR-1 -------- Mflv_3072|M.gilvum_PYR-GCK --------