For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTPKTEQRRAAERWFLQRGLPAVLRPGVLVQRVWTRSAPALAALAVMMAFSTLVVAVTGEHTIAIDGTPT RTEWFIIGVVLVVLPTAALVGWLVSRTDDLRLRGAVSTTSLAVAALGGIYAGPSAHVFVDMVTEIVLIVL IFVCTATGVGAILGWAVRMTLANLASVGNLLLGALPVMLLTVLVFFNGPVWTMASTITRPRLWVALLFLM LIAVTFLVSSTLSLVGPILSPDAKRPEDAAQLDGTPFETMPDRPRRVKLSKAERLNVVFVLAMSQVVQVL TVSIVTGLLFFVLGLILISPELLAALTNGGSSDGEFLGMTLPVPQALIHITMFLTALTFMYLAARTVGDK DYRAQFLDPLIEDLRFTLVARDRYRTLTANT
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_3452 | - | - | 100% (381) | hypothetical protein Mvan_3452 |
| M. vanbaalenii PYR-1 | Mvan_3454 | - | 1e-47 | 31.58% (380) | hypothetical protein Mvan_3454 |
| M. vanbaalenii PYR-1 | Mvan_3629 | - | 4e-06 | 23.91% (230) | diguanylate cyclase with PAS/PAC sensor |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2137 | - | 8e-86 | 46.99% (366) | integral membrane protein |
| M. gilvum PYR-GCK | Mflv_3074 | - | 1e-163 | 77.11% (380) | hypothetical protein Mflv_3074 |
| M. tuberculosis H37Rv | Rv2113 | - | 9e-87 | 47.27% (366) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_3089 | - | 8e-90 | 45.36% (366) | integral membrane protein |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2335 | - | 5e-64 | 45.42% (284) | integral membrane protein |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3089|M.marinum_M MNPSPHRAPARRDPSSAAAESWFLERGLPAVLTRRARWRRLWSRSAPVLA
MUL_2335|M.ulcerans_Agy99 -----------------------------------------MSRHEPFPA
Mb2137|M.bovis_AF2122/97 MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLA
Rv2113|M.tuberculosis_H37Rv MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLA
Mvan_3452|M.vanbaalenii_PYR-1 --------MTPKTEQRRAAERWFLQRGLPAVLRPGVLVQRVWTRSAPALA
Mflv_3074|M.gilvum_PYR-GCK --------MTPTSVQRLAAERWFLDRGLPAVLRPGVLVQRVWTRSAPALA
.* * *
MMAR_3089|M.marinum_M AYATLHCWTLPILLITHGDEVVIDGQPTPREWVLVTLVAIAPVLITFVGW
MUL_2335|M.ulcerans_Agy99 PRS---------------------GTPRPVECRGGKLVS---------GT
Mb2137|M.bovis_AF2122/97 AWAVVEGCLMAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGW
Rv2113|M.tuberculosis_H37Rv AWAVVEGCLMAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGW
Mvan_3452|M.vanbaalenii_PYR-1 ALAVMMAFSTLVVAVTGEHTIAIDGTPTRTEWFIIGVVLVVLPTAALVGW
Mflv_3074|M.gilvum_PYR-GCK ALAVAMAFSILVVGVTGKHTIDIDGTPTRTEWFVLGVVVVVLPTAAFVGW
. : . * : :: *
MMAR_3089|M.marinum_M LVSRLSDSRMRSVAATVAVSLVAIVLIVETSV----SHLPDAALAAVMVL
MUL_2335|M.ulcerans_Agy99 GLARGAD-QAGPLAATVAVSLVAIVLIVETSV----SHLPDAALAAVMVL
Mb2137|M.bovis_AF2122/97 LVSQISSGRGQAAVATMAVAFAAASDVIESGP----IQLLRTAVVVGLVL
Rv2113|M.tuberculosis_H37Rv LVSQISSGRGQAAVATMAVAFAAASDVIESGP----IQLLRTAVVVGLVL
Mvan_3452|M.vanbaalenii_PYR-1 LVSRTDDLRLRGAVSTTSLAVAALGGIYAGPSAHVFVDMVTEIVLIVLIF
Mflv_3074|M.gilvum_PYR-GCK LVSRSDDVRLRAVVSTASVGVGILGALYGGPSPRVWADLVAEAVIVALIL
::: . : .:* ::.. : .: : :::
MMAR_3089|M.marinum_M LLTGSGIGSVTGWSVRMTLSHLATIGALAVRALPVVLLTTLVFFNSNIWL
MUL_2335|M.ulcerans_Agy99 LLTGSGIGSVTGWSVRMTLSHLATIGALAVRALPVVLLTTLVFFNSNIWL
Mb2137|M.bovis_AF2122/97 LQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWL
Rv2113|M.tuberculosis_H37Rv LQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWL
Mvan_3452|M.vanbaalenii_PYR-1 VCTATGVGAILGWAVRMTLANLASVGNLLLGALPVMLLTVLVFFNGPVWT
Mflv_3074|M.gilvum_PYR-GCK LGTASGGGAILGWAVRMMLGNLASVGNLLLRALPVMLLTVLVFFNGPVWT
: *. * *:: **:*** * :**::* * : ***::***.***** :*
MMAR_3089|M.marinum_M MASTISAERLALAIAFLVGIASVFVISTTAERVKPMLQAPTVQPKNCQEL
MUL_2335|M.ulcerans_Agy99 MASTISAERLALAIAFLVGIASVFVISTTAERVKPMLQAPTVQPKNCQEL
Mb2137|M.bovis_AF2122/97 MAANINGERLPLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSL
Rv2113|M.tuberculosis_H37Rv MAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSL
Mvan_3452|M.vanbaalenii_PYR-1 MASTITRPRLWVALLFLMLIAVTFLVSSTLSLVGPILSPDAKRPEDAAQL
Mflv_3074|M.gilvum_PYR-GCK MAATVHRPRLWFALVFLMTIAVSFLLSTMMAGVRPILLPDAKAEQDAAAL
**:.: ** .*: **: ** *::*. * *:* . : :.. *
MMAR_3089|M.marinum_M ADTPFAAMPDPPSSRPLTRAERANVVFVLTAHQLVQIMVVAMLTATIYVI
MUL_2335|M.ulcerans_Agy99 ADTPFAAMPDPPSSRPLTRAERANVVFVLTAHQLVQIMVVAMLTATIYVI
Mb2137|M.bovis_AF2122/97 AGTPFATMGDPSPGFPLTRAERLNVVFLLAALQLVEILVVASVGAAIYLV
Rv2113|M.tuberculosis_H37Rv AGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLV
Mvan_3452|M.vanbaalenii_PYR-1 DGTPFETMPDRPRRVKLSKAERLNVVFVLAMSQVVQVLTVSIVTGLLFFV
Mflv_3074|M.gilvum_PYR-GCK RGTPFETMPDRPRRVDLSRSERLNVGFVLALSQIVQVLTVSIVTGLLFFA
.*** :* * . *:::** ** *:*: *:*:::.*: : . ::.
MMAR_3089|M.marinum_M LGLIVLSPALLQEWSHNVSSNATVLGLTVPVPDSLIHLCLFIGALTFMYI
MUL_2335|M.ulcerans_Agy99 LELIVLSPALLQEWSHNVSSNATVLGLTVPVPDSLIHLCLFIGALTFMYI
Mb2137|M.bovis_AF2122/97 LGMIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYI
Rv2113|M.tuberculosis_H37Rv LGMIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYI
Mvan_3452|M.vanbaalenii_PYR-1 LGLILISPELLAALTNGGSSDGEFLGMTLPVPQALIHITMFLTALTFMYL
Mflv_3074|M.gilvum_PYR-GCK FGLILISPELLAALTANGSPDGWFLGMTLPVPDALIQVSMFLTALTFMYL
: :*:::* ** : * .**:*.*.*::**:: :*: ******:
MMAR_3089|M.marinum_M SARAVGDAEYRATFVDPLIENLHITLIARGRYRANIDDT---DVDASPGG
MUL_2335|M.ulcerans_Agy99 SARAVGDAEYRATFVDPLIENLHITLIAPGRYGANIDDT---DVDASPGG
Mb2137|M.bovis_AF2122/97 SARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVD
Rv2113|M.tuberculosis_H37Rv SARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVD
Mvan_3452|M.vanbaalenii_PYR-1 AARTVGDKDYRAQFLDPLIEDLRFTLVARDRYRTLTANT-----------
Mflv_3074|M.gilvum_PYR-GCK AARAVADKEYRTQFLDPLIEDLRVTLVARDRYRTVTADPPPGNTPS----
:**:* * :**: *:****::*: :*:* .** .
MMAR_3089|M.marinum_M D
MUL_2335|M.ulcerans_Agy99 D
Mb2137|M.bovis_AF2122/97 D
Rv2113|M.tuberculosis_H37Rv D
Mvan_3452|M.vanbaalenii_PYR-1 -
Mflv_3074|M.gilvum_PYR-GCK -