For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_3089 (-)

annotation: integral membrane protein
coordinates: 3740382 - 3741566
length: 394

MNPSPHRAPARRDPSSAAAESWFLERGLPAVLTRRARWRRLWSRSAPVLAAYATLHCWTLPILLITHGDE
VVIDGQPTPREWVLVTLVAIAPVLITFVGWLVSRLSDSRMRSVAATVAVSLVAIVLIVETSVSHLPDAAL
AAVMVLLLTGSGIGSVTGWSVRMTLSHLATIGALAVRALPVVLLTTLVFFNSNIWLMASTISAERLALAI
AFLVGIASVFVISTTAERVKPMLQAPTVQPKNCQELADTPFAAMPDPPSSRPLTRAERANVVFVLTAHQL
VQIMVVAMLTATIYVILGLIVLSPALLQEWSHNVSSNATVLGLTVPVPDSLIHLCLFIGALTFMYISARA
VGDAEYRATFVDPLIENLHITLIARGRYRANIDDTDVDASPGGD
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_3089--100% (394)integral membrane protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2137-1e-12156.54% (382) integral membrane protein
M. gilvum PYR-GCKMflv_3074-4e-8443.65% (378) hypothetical protein Mflv_3074
M. tuberculosis H37RvRv2113-1e-12156.54% (382) integral membrane protein
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. avium 104-----
M. smegmatis MC2 155-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_2335-1e-15198.58% (282) integral membrane protein
M. vanbaalenii PYR-1Mvan_3452-8e-9045.36% (366) hypothetical protein Mvan_3452

CLUSTAL 2.0.9 multiple sequence alignment


Mb2137|M.bovis_AF2122/97           MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLA
Rv2113|M.tuberculosis_H37Rv        MSLSVRRPPAARAAAIVEAESWFLKRGLPSVLTMRGRCRRLWPRSAPMLA
MMAR_3089|M.marinum_M              MNPSPHRAPARRDPSSAAAESWFLERGLPAVLTRRARWRRLWSRSAPVLA
MUL_2335|M.ulcerans_Agy99          -----------------------------------------MSRHEPFPA
Mflv_3074|M.gilvum_PYR-GCK         --------MTPTSVQRLAAERWFLDRGLPAVLRPGVLVQRVWTRSAPALA
Mvan_3452|M.vanbaalenii_PYR-1      --------MTPKTEQRRAAERWFLQRGLPAVLRPGVLVQRVWTRSAPALA
                                                                             .*  *  *

Mb2137|M.bovis_AF2122/97           AWAVVEGCLMAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGW
Rv2113|M.tuberculosis_H37Rv        AWAVVEGCLMAVFFVTDGGEVFISATPTTAQWVILALLAVALPLASLVGW
MMAR_3089|M.marinum_M              AYATLHCWTLPILLITHGDEVVIDGQPTPREWVLVTLVAIAPVLITFVGW
MUL_2335|M.ulcerans_Agy99          PRS---------------------GTPRPVECRGGKLVS---------GT
Mflv_3074|M.gilvum_PYR-GCK         ALAVAMAFSILVVGVTGKHTIDIDGTPTRTEWFVLGVVVVVLPTAAFVGW
Mvan_3452|M.vanbaalenii_PYR-1      ALAVMMAFSTLVVAVTGEHTIAIDGTPTRTEWFIIGVVLVVLPTAALVGW
                                   . :                     . *   :     ::          * 

Mb2137|M.bovis_AF2122/97           LVSQISSGRGQAAVATMAVAFAAASDVIESGP----IQLLRTAVVVGLVL
Rv2113|M.tuberculosis_H37Rv        LVSQISSGRGQAAVATMAVAFAAASDVIESGP----IQLLRTAVVVGLVL
MMAR_3089|M.marinum_M              LVSRLSDSRMRSVAATVAVSLVAIVLIVETSV----SHLPDAALAAVMVL
MUL_2335|M.ulcerans_Agy99          GLARGAD-QAGPLAATVAVSLVAIVLIVETSV----SHLPDAALAAVMVL
Mflv_3074|M.gilvum_PYR-GCK         LVSRSDDVRLRAVVSTASVGVGILGALYGGPSPRVWADLVAEAVIVALIL
Mvan_3452|M.vanbaalenii_PYR-1      LVSRTDDLRLRGAVSTTSLAVAALGGIYAGPSAHVFVDMVTEIVLIVLIF
                                    :::  . :    .:* ::..     :          .:    :   :::

Mb2137|M.bovis_AF2122/97           LQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWL
Rv2113|M.tuberculosis_H37Rv        LQTGCGVGSVLGWAVRMTLEHLATVGTLAVRALPIVLLTALVFFNTYVWL
MMAR_3089|M.marinum_M              LLTGSGIGSVTGWSVRMTLSHLATIGALAVRALPVVLLTTLVFFNSNIWL
MUL_2335|M.ulcerans_Agy99          LLTGSGIGSVTGWSVRMTLSHLATIGALAVRALPVVLLTTLVFFNSNIWL
Mflv_3074|M.gilvum_PYR-GCK         LGTASGGGAILGWAVRMMLGNLASVGNLLLRALPVMLLTVLVFFNGPVWT
Mvan_3452|M.vanbaalenii_PYR-1      VCTATGVGAILGWAVRMTLANLASVGNLLLGALPVMLLTVLVFFNGPVWT
                                   : *. * *:: **:*** * :**::* * : ***::***.*****  :* 

Mb2137|M.bovis_AF2122/97           MAANINGERLPLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSL
Rv2113|M.tuberculosis_H37Rv        MAANINGERLTLAMVFLLAIAGAFVVSKTVERVRPLLRSTTVMPQGSQSL
MMAR_3089|M.marinum_M              MASTISAERLALAIAFLVGIASVFVISTTAERVKPMLQAPTVQPKNCQEL
MUL_2335|M.ulcerans_Agy99          MASTISAERLALAIAFLVGIASVFVISTTAERVKPMLQAPTVQPKNCQEL
Mflv_3074|M.gilvum_PYR-GCK         MAATVHRPRLWFALVFLMTIAVSFLLSTMMAGVRPILLPDAKAEQDAAAL
Mvan_3452|M.vanbaalenii_PYR-1      MASTITRPRLWVALLFLMLIAVTFLVSSTLSLVGPILSPDAKRPEDAAQL
                                   **:.:   ** .*: **: **  *::*.    * *:* . :   :..  *

Mb2137|M.bovis_AF2122/97           AGTPFATMGDPSPGFPLTRAERLNVVFLLAALQLVEILVVASVGAAIYLV
Rv2113|M.tuberculosis_H37Rv        AGTPFATMGDPSPGFPLTRAERLNVVFLLAASQLVEILVVASVGAAIYLV
MMAR_3089|M.marinum_M              ADTPFAAMPDPPSSRPLTRAERANVVFVLTAHQLVQIMVVAMLTATIYVI
MUL_2335|M.ulcerans_Agy99          ADTPFAAMPDPPSSRPLTRAERANVVFVLTAHQLVQIMVVAMLTATIYVI
Mflv_3074|M.gilvum_PYR-GCK         RGTPFETMPDRPRRVDLSRSERLNVGFVLALSQIVQVLTVSIVTGLLFFA
Mvan_3452|M.vanbaalenii_PYR-1      DGTPFETMPDRPRRVKLSKAERLNVVFVLAMSQVVQVLTVSIVTGLLFFV
                                    .*** :* * .    *:::** ** *:*:  *:*:::.*: : . ::. 

Mb2137|M.bovis_AF2122/97           LGMIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYI
Rv2113|M.tuberculosis_H37Rv        LGMIILTPPLLREWTHYDSMTTTVLGMTFPAPDSLIRMCLFLGALTFMYI
MMAR_3089|M.marinum_M              LGLIVLSPALLQEWSHNVSSNATVLGLTVPVPDSLIHLCLFIGALTFMYI
MUL_2335|M.ulcerans_Agy99          LELIVLSPALLQEWSHNVSSNATVLGLTVPVPDSLIHLCLFIGALTFMYI
Mflv_3074|M.gilvum_PYR-GCK         FGLILISPELLAALTANGSPDGWFLGMTLPVPDALIQVSMFLTALTFMYL
Mvan_3452|M.vanbaalenii_PYR-1      LGLILISPELLAALTNGGSSDGEFLGMTLPVPQALIHITMFLTALTFMYL
                                   : :*:::* **   :   *    .**:*.*.*::**:: :*: ******:

Mb2137|M.bovis_AF2122/97           SARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVD
Rv2113|M.tuberculosis_H37Rv        SARAVDDAEYRAMFLDPLIDDLHTALLARNRYRNNVVTAPCAGVDAGHVD
MMAR_3089|M.marinum_M              SARAVGDAEYRATFVDPLIENLHITLIARGRYRANIDDT---DVDASPGG
MUL_2335|M.ulcerans_Agy99          SARAVGDAEYRATFVDPLIENLHITLIAPGRYGANIDDT---DVDASPGG
Mflv_3074|M.gilvum_PYR-GCK         AARAVADKEYRTQFLDPLIEDLRVTLVARDRYRTVTADPPPGNTPS----
Mvan_3452|M.vanbaalenii_PYR-1      AARTVGDKDYRAQFLDPLIEDLRFTLVARDRYRTLTANT-----------
                                   :**:* * :**: *:****::*: :*:* .**      .           

Mb2137|M.bovis_AF2122/97           D
Rv2113|M.tuberculosis_H37Rv        D
MMAR_3089|M.marinum_M              D
MUL_2335|M.ulcerans_Agy99          D
Mflv_3074|M.gilvum_PYR-GCK         -
Mvan_3452|M.vanbaalenii_PYR-1      -