For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TDPQNITVDLLVVGSGTGMAAALAARELGLSTLIVEKTSYVGGSTARSGGAFWMPGNPILTEAGSADSLD KGRTYLDALVGSDAPLERAHAFLENGPATIAMLRRTTPMKFQWAKGYSDYHPEQPGGSAVGRTCECRPFD TAVLGSELSRLRPGVMKSSFPMPVTGADYRWLNLMARAPRKSWPRIMLRAAQGIGGLALRRRYAAGGQAL AAGLFAGVLDAGIPVWTDSPVTTLVTDGARVTGAVVDRNGTEVTVTARRGVVLAAGGFDRLMSWRHKFQS ELLGDHHSLGAEGNTGDGIRMAQDLGAGTGLMDQAWWFPAFAPLPGGDPTVMLAERSLPGCLLVDQKGER FINEATDYMSFGQQLLQREQAGDPVEVMWMIFDQRYRNSYLLAAELFPRMPIPQAWFDAGIAYRSTDLPG LARQIGLETATFVATMDRFNDLADAGVDSDFHRGASAYDRYYGDPTHAPNPNLRPVDSGPFYAVKVVLSD LGTCGGLRADARGRVLREDGSAVDGLYAIGNTAANTFGKTYPGAGATIGQGLVFGYIVAQHAAGRLD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2868 | - | - | 100% (558) | 3-ketosteroid-delta-1-dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_5237 | - | e-121 | 42.93% (552) | 3-ketosteroid-delta-1-dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_4243 | - | e-111 | 40.91% (572) | 3-ketosteroid-delta-1-dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3567 | - | 1e-121 | 43.35% (556) | 3-ketosteroid-delta-1-dehydrogenase |
M. gilvum PYR-GCK | Mflv_4567 | - | 0.0 | 70.75% (547) | 3-ketosteroid-delta-1-dehydrogenase |
M. tuberculosis H37Rv | Rv3537 | - | 1e-121 | 43.35% (556) | 3-ketosteroid-delta-1-dehydrogenase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0081 | - | 0.0 | 66.85% (552) | 3-ketosteroid-delta-1-dehydrogenase |
M. marinum M | MMAR_5024 | - | 1e-123 | 42.96% (561) | dehydrogenase |
M. avium 104 | MAV_3039 | - | 0.0 | 67.77% (546) | 3-ketosteroid-delta-1-dehydrogenase |
M. smegmatis MC2 155 | MSMEG_2869 | - | 0.0 | 81.36% (558) | 3-ketosteroid-delta-1-dehydrogenase |
M. thermoresistible (build 8) | TH_2946 | - | 0.0 | 76.62% (556) | PUTATIVE 3-ketosteroid-delta-1-dehydrogenase |
M. ulcerans Agy99 | MUL_4098 | - | 1e-122 | 43.14% (561) | 3-ketosteroid-delta-1-dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_2868|M.vanbaalenii_PYR-1 ------------MTDPQNITVDLLVVGSG-TGMAAALAARELGLSTLIVE MSMEG_2869|M.smegmatis_MC2_155 ------------MTDPQNLTVDLLVVGSG-TGMAAALAAHELGLSAMIVE TH_2946|M.thermoresistible__bu MTARRGGGQNRAVTVAQNIEVDLLVVGSG-TGMAAALAAHELGLTTLIVE Mflv_4567|M.gilvum_PYR-GCK --MTAASATIPAGLPVSDTTVDLLVVGSG-TGMSAALAAHEAGLSVLIVE MAV_3039|M.avium_104 --MTTHSATIPAGLPVADTAVDLLVVGSG-TGMAAALAAHELGLSVLIVE MAB_0081|M.abscessus_ATCC_1997 -MASAPPGLIPAGTVAGDIEIDLLIVGAG-TGMAAALAASELGLSVLIVE Mb3567|M.bovis_AF2122/97 ---------------MTVQEFDVVVVGSGAAGMVAALVAAHRGLSTVVVE Rv3537|M.tuberculosis_H37Rv ---------------MTVQEFDVVVVGSGAAGMVAALVAAHRGLSTVVVE MMAR_5024|M.marinum_M ------------MFYMTSQDYDVVVVGSGGAGMVAALAAAHKGLSTVVIE MUL_4098|M.ulcerans_Agy99 ---------------MTSQDYDVVVVGSGGAGMVAALAAAHKGLSTVVIE *:::**:* :** ***.* . **:.:::* Mvan_2868|M.vanbaalenii_PYR-1 KTSYVGGSTARSGGAFWMPGNPILTEAGSADSLDKGRTYLDALVGS---- MSMEG_2869|M.smegmatis_MC2_155 KTALVGGSTARSGGAFWMPANPILSEEGSDDTLDAGRTYLETLVAD---- TH_2946|M.thermoresistible__bu KTAQVGGSTARSGGAFWMPANPVLTEAGAADTLDAARSYLEAVVED---- Mflv_4567|M.gilvum_PYR-GCK KSEYVGGSTARSGGALWLPASPVLGAAGAGDSVERARTYLDAVVDG---- MAV_3039|M.avium_104 KSSYVGGSTARSGGALWLPASPVLDEANAGDTAERAGTYLDSVVAG---- MAB_0081|M.abscessus_ATCC_1997 KSHQVGGSTARSGGALWLPASPVLRAAGTGDSVERARTYLRSVVAG---- Mb3567|M.bovis_AF2122/97 KAPHYGGSTARSGGGVWIPNNEVLKRRGVRDTPEAARTYLHGIVG----E Rv3537|M.tuberculosis_H37Rv KAPHYGGSTARSGGGVWIPNNEVLKRRGVRDTPEAARTYLHGIVG----E MMAR_5024|M.marinum_M KAAHYGGSTARSGGGVWIPNNQILKRARVSDTTEAARTYLHGIIGDSSVS MUL_4098|M.ulcerans_Agy99 KAAHYGGSTARSGGGVWIPNNQILKRARVSDTTEAARTYLHGIIGDSSVS *: *********..*:* . :* *: : . :** :: Mvan_2868|M.vanbaalenii_PYR-1 DAPLERAHAFLENGPATIAMLRRTTPMKFQWAKGYSDYHPEQPGGSAVGR MSMEG_2869|M.smegmatis_MC2_155 AAPADRAGAFLDHGSATVEMLRRTTPMKFQWAKGYSDYHPERPGGSAVGR TH_2946|M.thermoresistible__bu SAPADRWQAFLDHGAETVRMLRRTTPMRFQWAKGYSDYHPERPGGAVLGR Mflv_4567|M.gilvum_PYR-GCK AAPSERSAGFLAHLTGTLDMLRRTTPMKLFWAREYSDYHPEQPGGSAAGR MAV_3039|M.avium_104 SAPPQRSAAFVAQVSATVEMLRRTTPLRLFWARDYSDYHPEEPGGSAAGR MAB_0081|M.abscessus_ATCC_1997 SAPDARSDAFLEHEAATVDMLTRLTPMRFTWCRDYADYHPEEPGGSPTGR Mb3567|M.bovis_AF2122/97 IVEPERIDAYLDRGPEMLSFVLKHTPLKMCWVPGYSDYYPEAPGGRPGGR Rv3537|M.tuberculosis_H37Rv IVEPERIDAYLDRGPEMLSFVLKHTPLKMCWVPGYSDYYPEAPGGRPGGR MMAR_5024|M.marinum_M GVEPERIDTYLERGPEMLSFVLEHTPLKMCWVPGYSDYYPEAPGGRSGGR MUL_4098|M.ulcerans_Agy99 GVEPERIDTYLERGPEMLSFVLEHTPLKMCWVPGYSDYYSEAPGGRSGGR . * :: . . : :: . **::: * *:**:.* *** ** Mvan_2868|M.vanbaalenii_PYR-1 TCECRPFDTAVLGSELSRLRPGVMKS-SFPMPVTGADYRWLNLMARAPRK MSMEG_2869|M.smegmatis_MC2_155 TCECRPFDTAVLGRELSRLRPGVMKS-SFPMPVTGADYRWLNLMARVPRK TH_2946|M.thermoresistible__bu TCECRPFDARILGPELDRLRPGVMKS-SLPVPVTGADYRWLNLMTRMPLK Mflv_4567|M.gilvum_PYR-GCK TCECRPLDTAVLGEYLPRLRPGVMEV-TIPMPTTGADYRWLNLMTRVPRK MAV_3039|M.avium_104 TCECRPFDTSLLGEYRTRLEPGLMEV-TVPMPTTGADYRWMNLVARLPRK MAB_0081|M.abscessus_ATCC_1997 TCECRPFDASVLGEYRTRLQPGVMKPPAVPMPVTSADYRWMNLMARLPRK Mb3567|M.bovis_AF2122/97 SIEPKPFNARKLGADMAGLEPAYGKV-PLNVVVMQQDYVRLNQLKRHPR- Rv3537|M.tuberculosis_H37Rv SIEPKPFNARKLGADMAGLEPAYGKV-PLNVVVMQQDYVRLNQLKRHPR- MMAR_5024|M.marinum_M SIEPKPFDARKLGADMAELEPAYGKI-PLNVVVMQQDYVRLNQLKRHPR- MUL_4098|M.ulcerans_Agy99 SIEPKPFDARKLGADMAELEPAYGKI-PLNVVVMQQDYVRLNQLKRHPR- : * :*::: ** *.*. : .. : . ** :* : * * Mvan_2868|M.vanbaalenii_PYR-1 SWPRIMLRAAQGIGGLALRRRYAAGGQALAAGLFAGVLDAGIPVWTDSPV MSMEG_2869|M.smegmatis_MC2_155 AVPRIMLRAFQGIGGLALRRRYAAGGQALAAGLYAGVLRAGIPVWTQSPL TH_2946|M.thermoresistible__bu AIPRIGLRVVQGVGGLALRRRYVAGGQALAAGLFAGVIRAGIPVWTHSPL Mflv_4567|M.gilvum_PYR-GCK GLPTIAKRLGQGVGGLLLGRRYAAGGQALAAGLFAGVLRAGIPVWTDTAL MAV_3039|M.avium_104 GIPVYAKRLVQGVGGRMLGRRYAAGGQGLMAGLFTGVLRAGIPIWTGTTL MAB_0081|M.abscessus_ATCC_1997 ALPLIVKRIAQGVGGAVLGRRYLAGGQALAAGLFAGVLRAGIPIWTGTSL Mb3567|M.bovis_AF2122/97 GVLRSMKVGARTMWAKATGKNLVGMGRALIGPLRIGLQRAGVPVELNTAF Rv3537|M.tuberculosis_H37Rv GVLRSMKVGARTMWAKATGKNLVGMGRALIGPLRIGLQRAGVPVELNTAF MMAR_5024|M.marinum_M GVLRSMKVGARTMWAKATGKNLVGMGRALIGPLRIGLQRKGVPVQLNTAL MUL_4098|M.ulcerans_Agy99 GVLRSMKVGARTMWAKATGKNLVGMGRALIGPLRIGLQRKGVPVQLNTAL . : : . :. . *:.* . * *: *:*: :.. Mvan_2868|M.vanbaalenii_PYR-1 TTLVTDGARVTGAVVDRNGTEVT-----VTARRGVVLAAGGFDRLMSWRH MSMEG_2869|M.smegmatis_MC2_155 VRLLVDGDRVTGAVVNRNGIDVA-----ITARRGVVLATGGFDHQMDWRR TH_2946|M.thermoresistible__bu TRLLFDGDDVVGAVIDRHGAEVT-----VRTRRGVILATGGFDHLLDWRR Mflv_4567|M.gilvum_PYR-GCK VELTGDDARVTGAVVSHRGTEIT-----VTARRGVVLAAGGFDHNMDMRW MAV_3039|M.avium_104 TRLTRRGERVSGAVVEHGGREVT-----ISARRGVVLATGGFDHRMEMRW MAB_0081|M.abscessus_ATCC_1997 VRLTTAGGRVTGAVVALAGREFT-----VTVSRGVVLAAGGFDHDMEMRH Mb3567|M.bovis_AF2122/97 TDLFVENGVVSGVYVRDSHEAESAEPQLIRARRGVILACGGFEHNEQMRI Rv3537|M.tuberculosis_H37Rv TDLFVENGVVSGVYVRDSHEAESAEPQLIRARRGVILACGGFEHNEQMRI MMAR_5024|M.marinum_M TDLYLEDGMVRGIYVRSTDAQESEEPQLIRARKGVILACGGFDHNEQMRV MUL_4098|M.ulcerans_Agy99 TDLYLEDGVVRGIYVRSTDAHESEEPQLIRARKGVILACGGFDHNEQMRV . * . * * : : : . :**:** ***:: . * Mvan_2868|M.vanbaalenii_PYR-1 KFQSELLGDHHSLGAEGNTGDGIRMAQDLGAGTGLMDQAWWFPAFAPLPG MSMEG_2869|M.smegmatis_MC2_155 KFQSESMNEDLSLGSEGNTGDGIRIAQDLGADTGLMDQAWWFPAFAPLPG TH_2946|M.thermoresistible__bu KFQLESLPGDLSLGAEGNTGDGIRIAQEVGAGTGLMDQAWWFPAFAPLPG Mflv_4567|M.gilvum_PYR-GCK KFQSESLQPGVSLGADTNTGDAIRIAQDRGAAIGLMDQSWWFPAVAPLPG MAV_3039|M.avium_104 KFQSESLGADLSLGAAGNTGDGIRAGQEIGAAIDLMDQAWWFPAVAPLPG MAB_0081|M.abscessus_ATCC_1997 KFQSAALGENMSLGADTNTGDALRIGQDCGAAIDSMNQAWWFPAVAPLPG Mb3567|M.bovis_AF2122/97 KYQRAPITTEWTVGASANTGDGILAAEKLGAALDLMDDAWWGPTVP-LVG Rv3537|M.tuberculosis_H37Rv KYQRAPITTEWTVGASANTGDGILAAEKLGAALDLMDDAWWGPTVP-LVG MMAR_5024|M.marinum_M KYQRAPITTDWTVGAKANTGDGIVAAEKLGAALDLMEDAWWGPTVP-LVG MUL_4098|M.ulcerans_Agy99 KYQRAPITTDWTVGAKANTGDGIVAAEKLGAALDLMEDAWWGPTVP-LVG *:* : ::*: ****.: .:. ** . *:::** *:.. * * Mvan_2868|M.vanbaalenii_PYR-1 GDPTVMLAERSLPGCLLVDQKGERFINEATDYMSFGQQLLQREQAGDP-- MSMEG_2869|M.smegmatis_MC2_155 GEPTVMLAERSLPGCLLVDQTGNRFINEATDYMSFGQRVLDRERVGNP-- TH_2946|M.thermoresistible__bu GEPAVMLAERSLPGCLLVDQTGNRFINEATDYMSFGQQLLRRERSGHP-- Mflv_4567|M.gilvum_PYR-GCK KAPAVMLAERSLPGSLIVDQNGRRFANESSDYMSFGQRVLELERTGTP-- MAV_3039|M.avium_104 KAPAVMLAERSLPGCLIVDQHGRRFVNEATDYMSFGQRLLELERSGSP-- MAB_0081|M.abscessus_ATCC_1997 GAPKVMLAERSLPGSFIVDHTGNRFINEATDYMSFGQRVLERERSGDP-- Mb3567|M.bovis_AF2122/97 -KPWFALSERNSPGSIIVNMSGKRFMNESMPYVEACHHMYGGEHGQGPGP Rv3537|M.tuberculosis_H37Rv -KPWFALSERNSPGSIIVNMSGKRFMNESMPYVEACHHMYGGEHGQGPGP MMAR_5024|M.marinum_M -RPWFALSERNSPGSIIVNMSGQRFMNESMPYVEACHHMYGGQYGQGPGP MUL_4098|M.ulcerans_Agy99 -RPWFALSERNSPGSIIVNMSGQRFMNESMPYVEACHHMYGGQYGQGPGP * . *:**. **.::*: *.** **: *:. ::: : * Mvan_2868|M.vanbaalenii_PYR-1 --VEVMWMIFDQRYRNSYLLAAELFPRMPIPQAWFDAGIAYRSTDLPGLA MSMEG_2869|M.smegmatis_MC2_155 --VDVMWMIFDQRYRNSYLLATELFPRMPIPQTWYDAGIAHRSDDLGGLA TH_2946|M.thermoresistible__bu --VEDMWMVFDQRYRDSYLLAAELFPRMPLPRSWYDAGIAHRSDDIPGLA Mflv_4567|M.gilvum_PYR-GCK --VESMWIVFDQKYRNSYVFAAELFPRMAIPQSWYDAGIAHRADDFSELA MAV_3039|M.avium_104 --VESMWIVFDQQYRNSYVFGAELFPRMRIPQAWYDAGIAVRADNLAELG MAB_0081|M.abscessus_ATCC_1997 --AESMWIIFDQQYRNSYVFAGQLYPRMPVPVSWFEARIAYRADSLADLA Mb3567|M.bovis_AF2122/97 GENIPAWLVFDQRYRDRYIFAG-LQPGQRIPSRWLDSGVIVQADTLAELA Rv3537|M.tuberculosis_H37Rv GENIPAWLVFDQRYRDRYIFAG-LQPGQRIPSRWLDSGVIVQADTLAELA MMAR_5024|M.marinum_M GENIPAWLVFDQRYRDRYIFAG-LQPGQRIPRKWLDSGVIVMADTLEELA MUL_4098|M.ulcerans_Agy99 GENIPAWLVFDQRYRDRYIFAG-LQPGQRIPRKWLDSGVIVMADTLEELA *::***:**: *::. * * :* * :: : : : *. Mvan_2868|M.vanbaalenii_PYR-1 RQIGLETATFVATMDRFNDLADAGVDSDFHRGASAYDRYYGDPTHAPNPN MSMEG_2869|M.smegmatis_MC2_155 RSIGVDVSVLTATLSRFNALARTGVDSDFGRGDSAYDRYYGDPTVTPNPN TH_2946|M.thermoresistible__bu RAIGVDASTLDATVERFNRLARAGVDTDFGRGDSAYDRYYGDPTVAPNPN Mflv_4567|M.gilvum_PYR-GCK GLMGVPPETFGDTMRRFNESAGAGIDSDFHRGESAYDRYYGDPTVTPSPN MAV_3039|M.avium_104 AGIGVPVPEFVETMTRFNQNAAAGEDPDFGRGRSAYDRYYGDPTVKPNPN MAB_0081|M.abscessus_ATCC_1997 AMIGIPRDAFLATVCRFNESAAAGDDGDFHRGRSSYDRYYGDPTVTPNPN Mb3567|M.bovis_AF2122/97 GKAGLPADELTATVQRFNAFARSGVDEDYHRGESAYDRYYGDPSNKPNPN Rv3537|M.tuberculosis_H37Rv GKAGLPADELTATVQRFNAFARSGVDEDYHRGESAYDRYYGDPSNKPNPN MMAR_5024|M.marinum_M AKAGLPVDELTSTVSRFNGFARSGVDEDYHRGESAYDRYYGDPTNKPNPN MUL_4098|M.ulcerans_Agy99 AKAGLPVDELTSTVSRFNGFARSGVDEDYHRGESAYDRYYGDPTNKPNPN *: : *: *** * :* * *: ** *:********: *.** Mvan_2868|M.vanbaalenii_PYR-1 LRPVDSGPFYAVKVVLSDLGTCGGLRADARGRVLREDGSAVDGLYAIGNT MSMEG_2869|M.smegmatis_MC2_155 LRPLDDGPLYAVKVVLSDLGTCGGVRADARGRALREDGSVIEGLYAIGNT TH_2946|M.thermoresistible__bu LRPLDHGPFYAVRVVLSDLGTCGGVRADHHARVLREDGSVIGGLYAIGNT Mflv_4567|M.gilvum_PYR-GCK LRPLAKGPFYAVKMVLSDLGTCGGLRADERARVLREDGAAIEGLYAIGNC MAV_3039|M.avium_104 LRPLVNGPFYAVRMVLSDLGTCGGLKTDERARVLREDGGPIAGLYAIGNT MAB_0081|M.abscessus_ATCC_1997 LRPLRRGPFYAVRMVLSDLGTCGGLRADERARVLREDGSVIKGLYAIGNT Mb3567|M.bovis_AF2122/97 LGEVGHPPYYGAKMVPGDLGTKGGIRTDVNGRALRDDGSIIDGLYAAGNV Rv3537|M.tuberculosis_H37Rv LGEVGHPPYYGAKMVPGDLGTKGGIRTDVNGRALRDDGSIIDGLYAAGNV MMAR_5024|M.marinum_M LGEINHAPYYAAKMVPGDLGTKGGIRTDVNGRALRDDGSIIDGLYAAGNV MUL_4098|M.ulcerans_Agy99 LGEINHAPYYAAKMVPGDLGTKGGIRTDVNGRALRDDGSIIDGLYAAGNV * : * *..::* .**** **:::* ..*.**:**. : **** ** Mvan_2868|M.vanbaalenii_PYR-1 AANTFGKTYPGAGATIGQGLVFGYIVAQHAAGRLD------------- MSMEG_2869|M.smegmatis_MC2_155 AANTFGASYPGAGATIGQGLVFGYIAARHAAGRLD------------- TH_2946|M.thermoresistible__bu AANVFGACYPGAGATIGQGLVFGYIAARHAATRAG------------- Mflv_4567|M.gilvum_PYR-GCK AANAFGATYPGAGATIAQGLVYGYVAALDAARG--------------- MAV_3039|M.avium_104 AANAFGTTYPGAGATIAQGLVYGYIAAQEAARPSAAQEAARPSASQPD MAB_0081|M.abscessus_ATCC_1997 AANAFGATYPGAGATIAQGLVYGYIAAHDAAAR--------------- Mb3567|M.bovis_AF2122/97 SAPVMGHTYPGPGGTIGPAMTFGYLAALHIADQAGKR----------- Rv3537|M.tuberculosis_H37Rv SAPVMGHTYPGPGGTIGPAMTFGYLAALHIADQAGKR----------- MMAR_5024|M.marinum_M SAPVMGHTYPGPGGTIGPAMTFGYLAALHIAGDR-------------- MUL_4098|M.ulcerans_Agy99 SAPVMGHTYPGPGGTIGPAMTFGYLAALHIAGDR-------------- :* .:* ***.*.**. .:.:**:.* . *