For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSTVEKAGAVWARVMDWWDGLTRAQKWVFGIILFAGIALSPLFTPGFIDTPGISFGGTMAQFAMVAIIAI GLNVVVGQAGLLDLGYVGFYAVGAYTVALLTSPESPWNKLGPTGFFSTPWAWLSCVPLAMAVTALSGLIL GTPTLRLRGDYLAIVTLGFGEIIRLLADNLADITNGPRGLNEVAFPHFLESDQHPEGVFSVSNSGGDANY GTWWFWLGLILIVGILLLVGNLERSRVGRAWIAVREDEDAAEVMGVNAFKFKLWAFTIGAAIGGLSGALY AGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVILGAFIIVYLPNRLLGVHFLGIDMGNLKYLFFGLA LVVLMIFRPQGLFPARQHLLTYARAARKLLRAQPTDTEPAK
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2843 | - | - | 100% (391) | inner-membrane translocator |
M. vanbaalenii PYR-1 | Mvan_2594 | - | 3e-18 | 25.09% (283) | inner-membrane translocator |
M. vanbaalenii PYR-1 | Mvan_2595 | - | 2e-08 | 22.77% (325) | inner-membrane translocator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3572 | - | 0.0 | 96.04% (379) | inner-membrane translocator |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2624c | - | 1e-164 | 74.86% (370) | high-affinity branched-chain amino acid ABC transporter (LivM) |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_3249 | - | 1e-180 | 83.56% (371) | branched-chain amino acid ABC transporter, permease protein |
M. thermoresistible (build 8) | TH_3840 | - | 1e-180 | 80.32% (376) | PUTATIVE branched-chain amino acid ABC transporter, permease |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_2843|M.vanbaalenii_PYR-1 ---MSTVEKAG---AVWAR--------VMDWWDGLTRAQKWVFGIILFAG Mflv_3572|M.gilvum_PYR-GCK ----------------MTR--------VMEWWDGLTRAQKWVFGIVLFAG MSMEG_3249|M.smegmatis_MC2_155 MSDQHTQQNPGENTSSLVRTLLAPGDIIREQWSTLPRVAKWAVGVIGFGL TH_3840|M.thermoresistible__bu ---VNRLLAPG----DVVR----------RWWDSRTRGHKWAVGLLGFGV MAB_2624c|M.abscessus_ATCC_199 -MSAARALAPG----DSIR----------RWWSELARPVQWVYGVVGFAL * *. .* :*. *:: *. Mvan_2843|M.vanbaalenii_PYR-1 IALSPLFTPGFIDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGLLDLGY Mflv_3572|M.gilvum_PYR-GCK IALSPLFKPGFIDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGLLDLGY MSMEG_3249|M.smegmatis_MC2_155 LALLPLFTPGFLNTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGLLDLGY TH_3840|M.thermoresistible__bu LALLPLYTPPFLDTPGISFGGTMAQFAMFALIAIGLNVVVGQAGLLDLGY MAB_2624c|M.abscessus_ATCC_199 LALLPVWKIPYLDTPNTSFGGVMAQFAMVALIAIGLNVVVGQAGLLDLGY :** *::. :::**. ****.******.*:******************* Mvan_2843|M.vanbaalenii_PYR-1 VGFYAVGAYTVALLTSPESPWNKLGPTGFFSTPWAWLSCVPLAMAVTALS Mflv_3572|M.gilvum_PYR-GCK VGFYAVGAYTVALLTSPESPWNQMSPKGILTTPWAWLACVPLAMAVTALS MSMEG_3249|M.smegmatis_MC2_155 VGFYAVGAYTVALLTSPSSPWNIVGVDKFLSSDWAWLACVPLAMAITAIA TH_3840|M.thermoresistible__bu VGFYAVGAYTVALLTSPESPWNRMGWTVFFSSDWAWLSCVPLAMAVTAFS MAB_2624c|M.abscessus_ATCC_199 VGFYAIGAYTVALLTSPDSPWNRMGTSAFFSSDWAWLSCLPIAVAITACF *****:***********.**** :. :::: ****:*:*:*:*:** Mvan_2843|M.vanbaalenii_PYR-1 GLILGTPTLRLRGDYLAIVTLGFGEIIRLLADNLADITNGPRGLNEVAFP Mflv_3572|M.gilvum_PYR-GCK GLILGTPTLRLRGDYLAIVTLGFGEIIRLLADNLADVTNGPRGLNEVAFP MSMEG_3249|M.smegmatis_MC2_155 GLILGTPTLRLRGDYLAIVTLGFGEIIRLMADNLSDITNGARGLNQVAYP TH_3840|M.thermoresistible__bu GLIIGTPTLRLRGDYLAIVTLGFGEIIRLVADNLSGVTNGARGLHQVAYP MAB_2624c|M.abscessus_ATCC_199 GLILGTPTLRLRGDYLAIVTLGFGEIIRLLADNL-DVTNGPRGLHKVAYP ***:*************************:**** .:***.***::**:* Mvan_2843|M.vanbaalenii_PYR-1 HFLESDQHPEGVFSVSNSGGDANYGTWWFWLGLILIVGILLLVGNLERSR Mflv_3572|M.gilvum_PYR-GCK HFLESEQHPEGVFSVSNSGGDANYGAWWFWLGLILIVGILLLVGNLERSR MSMEG_3249|M.smegmatis_MC2_155 RLGESEKLPNGVFSSGNSTGVANYGTWWFWLGLALIVGILLLVGNLERSR TH_3840|M.thermoresistible__bu RVGESERLPDGVFSSGNSAGAANYGTWWFWLGLVLIAVILVLVGNLERSR MAB_2624c|M.abscessus_ATCC_199 HVGEQHVHGGGVFSSANSGGHLNYGVWWYWLGLCLIAAVLVLMGNLERSR :. *.. **** .** * ***.**:**** **. :*:*:******* Mvan_2843|M.vanbaalenii_PYR-1 VGRAWIAVREDEDAAEVMGVNAFKFKLWAFTIGAAIGGLSGALYAGQVQY Mflv_3572|M.gilvum_PYR-GCK VGRAWIAVREDEDAAEVMGVNAFKFKLWAFTIGAAIGGLSGALYAGQVQY MSMEG_3249|M.smegmatis_MC2_155 VGRAWIAIREDEDAAEVMGVNAFKFKLWAFTIGAAIGGLSGALYAGQVQY TH_3840|M.thermoresistible__bu VGRAWIAIREDEDAAEVMGVNTFKFKVWAFVIGAAIGGLSGALYAGQVQY MAB_2624c|M.abscessus_ATCC_199 VGRSWVAIREDEDAAEMMGVPTFRFKLWAFVIGASIGGLSGALYAGQVQY ***:*:*:********:*** :*:**:***.***:*************** Mvan_2843|M.vanbaalenii_PYR-1 VAPPTFNIINSMLFLCAVVLGGQGNKLGVILGAFIIVYLPNRLLGVHFLG Mflv_3572|M.gilvum_PYR-GCK VAPPTFNIINSMLFLCAVVLGGQGNKLGVILGAFIIVYLPNRLLGVHFLG MSMEG_3249|M.smegmatis_MC2_155 VAPQTFNIINSMLFLCAVVLGGQGNKLGVIFGAFVIVYLPNRLLGVEFLG TH_3840|M.thermoresistible__bu VAPPTFNIINSMLFLCAVVLGGQGNKLGVVLGAFVIVYLPNRLLGVELLG MAB_2624c|M.abscessus_ATCC_199 VASPTFNIINSMLFLCAVVLGGQGNKLGVVVGAFIIVYLPNRLLGVQVQG **. *************************:.***:***********.. * Mvan_2843|M.vanbaalenii_PYR-1 IDMGNLKYLFFGLALVVLMIFRPQGLFPARQHLLTYARAARKLLRAQPTD Mflv_3572|M.gilvum_PYR-GCK IDMGNLKYLFFGLALVVLMIFRPQGLFPARQHLLTYARAARKLLRAKPTD MSMEG_3249|M.smegmatis_MC2_155 INLGDLKYLFFGLALVVLMIFRPQGLFPARQHLLTYGKAARDLLRATPVK TH_3840|M.thermoresistible__bu VNLGDLKYLFFGLALVVMMIFRPAGLFPARQQLLAYGRSAREMLRARPDD MAB_2624c|M.abscessus_ATCC_199 IDLGNLKYLFFGLALVVLMLFRPQGLFPAHQKLMAYWRKTSERLSAQKPD :::*:************:*:*** *****:*:*::* : : . * * . Mvan_2843|M.vanbaalenii_PYR-1 TEPAK- Mflv_3572|M.gilvum_PYR-GCK TEPAK- MSMEG_3249|M.smegmatis_MC2_155 EHTS-- TH_3840|M.thermoresistible__bu REPVSS MAB_2624c|M.abscessus_ATCC_199 EVEAGA