For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RTLLGRWQTWAGFGAAALVLFVVAPAVLSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLG GYMMAMHLKIADAQLRGDEVPDFMQIQGIRELPGYWAPFASPLVTLIAIVVVPTGIAAALGLGVFKRKVK GAYFAILSQALAAALAILLVGQTSLGGSNGLNRFRTFFGFALNDPVNRRMLYFIAAAVLLVVVAVVRQLM QSRYGELLVAVRDGEERVRFLGYDPANIKVVAYAAAALFASIAGALFAPIVGFIAPSQVGILPSIAFLIG VAIGGRTTLLGPVLGAIGVAWAQTLFSERFPSEWTYAQGLLFIVVVGFFPAGLAGLGVLLKRRRKAGTEP PPEKAPDTDPDTEKVGAGS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2594 | - | - | 100% (370) | inner-membrane translocator |
M. vanbaalenii PYR-1 | Mvan_2843 | - | 3e-18 | 25.09% (283) | inner-membrane translocator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3800 | - | 0.0 | 91.89% (370) | inner-membrane translocator |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2624c | - | 7e-16 | 22.97% (283) | high-affinity branched-chain amino acid ABC transporter (LivM) |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_2980 | - | 0.0 | 85.60% (375) | hypothetical protein MSMEG_2980 |
M. thermoresistible (build 8) | TH_2330 | - | 1e-175 | 88.22% (348) | putative membrane protein |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_2594|M.vanbaalenii_PYR-1 -------MR-TLLGRWQTWAG------FGAAALVLFVVAPAVLSDFRLS- Mflv_3800|M.gilvum_PYR-GCK -------MR-ALLGRWQTWAG------FGVAALVLFVLAPAILSDFRLS- TH_2330|M.thermoresistible__bu ---VLDRMPGGVLGRWQTWAG------FGLAALVLFVVAPMVLSDFRLG- MSMEG_2980|M.smegmatis_MC2_155 -------MR-TMLGRWQTWAG------FAVAAVLLFGVAPAVLSDFRLS- MAB_2624c|M.abscessus_ATCC_199 MSAARALAPGDSIRRWWSELARPVQWVYGVVGFALLALLPVWKIPYLDTP : ** : . :. ... *: : * : Mvan_2594|M.vanbaalenii_PYR-1 ------LLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLGGYMMAMHL Mflv_3800|M.gilvum_PYR-GCK ------LLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLGGYMMAMHL TH_2330|M.thermoresistible__bu ------LFGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGIGGYLMGMHL MSMEG_2980|M.smegmatis_MC2_155 ------LLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLGGYMMGMHL MAB_2624c|M.abscessus_ATCC_199 NTSFGGVMAQFAMVALIAIGLNVVVGQAGLLDLGYVGFYAIGAYTVAL-L ::.:* .*::*:*:.:. *:.*:* ** *:.:*.* :.: * Mvan_2594|M.vanbaalenii_PYR-1 KIADAQLRGDEVPDFMQIQGIRELPGYWAPFASPLVTLIAIVVVPTGIAA Mflv_3800|M.gilvum_PYR-GCK KIADAQLRGDDVPDFMQIQGIRELPSYWTPFASPAVTLIAIVVIPTGIAV TH_2330|M.thermoresistible__bu KIADAQIYGTGVPDFMQIAGVRELPGYWEPFASPVVTLAAIVVLPTGIAA MSMEG_2980|M.smegmatis_MC2_155 KIADAEIRHQAVPDFMQIAGVRELPGYWTPFASPVFTLLAILVIPAGIAA MAB_2624c|M.abscessus_ATCC_199 TSPDSPWNRMGTSAFFSSD--------WAWLS----CLPIAVAITACFGL . .*: .. *:. * :: * :.:.: :. Mvan_2594|M.vanbaalenii_PYR-1 ALGLGVFKRKVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNRFR--- Mflv_3800|M.gilvum_PYR-GCK VLGLGVFKRKVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNRFR--- TH_2330|M.thermoresistible__bu ALGFGVFKRRVKGAYFAILSQALAAALAIFLVGQTSLGGSNGLNRFR--- MSMEG_2980|M.smegmatis_MC2_155 LLGLGVFKRRVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNNFR--- MAB_2624c|M.abscessus_ATCC_199 ILGTPTLR--LRGDYLAIVTLGFGEIIRLLADNLDVTNGPRGLHKVAYPH ** .:: ::* *:**:: .:. : :: . .*..**:.. Mvan_2594|M.vanbaalenii_PYR-1 ----TFFGFALNDPVNRR-------MLYFIAAAVLLVVVAVVRQLMQSRY Mflv_3800|M.gilvum_PYR-GCK ----TFFGFTLNDPANRR-------MLYFIAAAVLLLVVAVVRQLMQSRY TH_2330|M.thermoresistible__bu ----TFFGFTLSDPANRR-------MLYFIAAATLLIVVAVARQLMQSRY MSMEG_2980|M.smegmatis_MC2_155 ----TFFGFTLNDPVNKR-------MLYFIAAATLLIVVAVVRQLMYSRY MAB_2624c|M.abscessus_ATCC_199 VGEQHVHGGGVFSSANSGGHLNYGVWWYWLGLCLIAAVLVLMGNLERSRV ..* : ...* *::. . : *:.: :* ** Mvan_2594|M.vanbaalenii_PYR-1 GELLVAVRDGEERVRFLGYDPANIKVVAYAAAALFASIAGALFAPIVGFI Mflv_3800|M.gilvum_PYR-GCK GELLVAVRDGEERVRFLGYDPANIKVVAYAVAALFASIAGALFAPIVGFI TH_2330|M.thermoresistible__bu GELLVAVRDNEERVRFLGYDPANVKVVAYTVAALFASIAGALFAPIVGFI MSMEG_2980|M.smegmatis_MC2_155 GELLVAVRDGEERVRFLGYDPANIKVVAYTLAALFASIAGALFTPIVGFI MAB_2624c|M.abscessus_ATCC_199 GRSWVAIREDEDAAEMMGVPTFRFKLWAFVIGASIGGLSGALYAGQVQYV *. **:*:.*: ..::* . ..*: *:. .* :..::***:: * :: Mvan_2594|M.vanbaalenii_PYR-1 APSQVGILPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTLFSERFPSEW Mflv_3800|M.gilvum_PYR-GCK APSQVGILPSIAFLIGVAIGGRATLLGPVLGAIGVAWAQTLFSERFPSAW TH_2330|M.thermoresistible__bu APSQVGILPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTLFSERFPSEW MSMEG_2980|M.smegmatis_MC2_155 APSQVGIIPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTLFSERFPSEW MAB_2624c|M.abscessus_ATCC_199 ASPTFNIINSMLFLCAVVLGGQGNKLGVVVGAFIIVYLPNRLLGVQVQGI *.. ..*: *: ** .*.:**: . ** *:**: :.: . : . Mvan_2594|M.vanbaalenii_PYR-1 TYA------QGLLFIVVVGFFPAGLAGLGVLLKRRRKAGTEPPP-----E Mflv_3800|M.gilvum_PYR-GCK TYG------QGLLFILVVGFLPAGLAGLGVFLKRRRKAEADTEP-----D TH_2330|M.thermoresistible__bu TYA------QGLLFIVVIGFFPAGLAGLGALRSRLRRRVPDP-------- MSMEG_2980|M.smegmatis_MC2_155 TYA------QGLLFIVVVGFFPAGIAGLGVALRRWRRNKPDPTPPGPDAE MAB_2624c|M.abscessus_ATCC_199 DLGNLKYLFFGLALVVLMLFRPQGLFPAHQKLMAYWRKTSER-------- . ** ::::: * * *: : .: Mvan_2594|M.vanbaalenii_PYR-1 KAPDTDPDTEKVGAGS Mflv_3800|M.gilvum_PYR-GCK KASDTDPDAEKVGASS TH_2330|M.thermoresistible__bu AVPVKHAQEVKVEAAV MSMEG_2980|M.smegmatis_MC2_155 PTTDSDPDAEKVGAAS MAB_2624c|M.abscessus_ATCC_199 -LSAQKPDEVEAGA-- . ..: :. *