For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVVPNFPVNRNANGLRSCQARRMNGPRCLIVDDSADFRDAARAMLERGGIVVVGTARDAAEALRRAQELH PDVALVDVDLGAESGFDVAERLDDVPVILTSTHDEQDFADLIAASPALGFLPKLTLSPAAVRKLLDRVSG SPGT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2072 | - | - | 100% (144) | response regulator receiver protein |
M. vanbaalenii PYR-1 | Mvan_1358 | - | 5e-08 | 32.46% (114) | two component LuxR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_2840 | - | 8e-08 | 27.00% (100) | response regulator receiver/ANTAR domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0867c | narL | 6e-08 | 35.29% (119) | nitrate/nitrite response transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_0730 | - | 8e-10 | 34.92% (126) | two component LuxR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0844c | narL | 5e-08 | 35.29% (119) | nitrate/nitrite response transcriptional regulatory protein |
M. leprae Br4923 | MLBr_02123 | - | 2e-08 | 35.96% (89) | two-component response regulator |
M. abscessus ATCC 19977 | MAB_0060 | - | 1e-08 | 35.29% (119) | nitrate/nitrite response transcriptional regulatory protein |
M. marinum M | MMAR_4782 | narL | 2e-08 | 35.29% (119) | nitrate/nitrite response regulator protein NarL |
M. avium 104 | MAV_4114 | - | 5e-08 | 31.03% (116) | response regulator receiver domain-containing protein |
M. smegmatis MC2 155 | MSMEG_0981 | - | 2e-29 | 57.39% (115) | two-component system regulator |
M. thermoresistible (build 8) | TH_3563 | - | 2e-08 | 33.33% (117) | PUTATIVE DNA-binding response regulator, LuxR family protein |
M. ulcerans Agy99 | MUL_0248 | prrA | 2e-08 | 37.50% (88) | two component response transcriptional regulatory protein |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_2072|M.vanbaalenii_PYR-1 MVVPNFPVNRNANGLRSCQARRMNGPRCLIVDDSADFRDAARAMLERGG- MSMEG_0981|M.smegmatis_MC2_155 -------------------------MRCLIVDDSASFRTAAATMLDSGG- Mflv_0730|M.gilvum_PYR-GCK -----------------MTG-PGR-VRVVVGDDHPMFRDGVVRALQSSGA MAB_0060|M.abscessus_ATCC_1997 -----------------MQV-SGELVRVVVGDDHPLFREGVVRALTASGQ Mb0867c|M.bovis_AF2122/97 -----------------MSNPQPEKVRVVVGDDHPLFREGVVRALSLSGS Rv0844c|M.tuberculosis_H37Rv -----------------MSNPQPEKVRVVVGDDHPLFREGVVRALSLSGS MMAR_4782|M.marinum_M -----------------MDVTKTEKVRVVVGDDHPLFREGVVRALSLSGS MAV_4114|M.avium_104 -----------------MTD-DATPTTVMVVDDHPIWRDAVARDLAESG- TH_3563|M.thermoresistible__bu -----------------MGE-PQQP-TVMVVDDHPIWREAVARDLAEAG- MLBr_02123|M.leprae_Br4923 ------------------MDTGVSSPRVLVVDDDSDVLASLERGLRLSG- MUL_0248|M.ulcerans_Agy99 ---------------MGGMDTGANSPRVLVVDDDSDVLASLERGLRLSG- :: ** . . * .* Mvan_2072|M.vanbaalenii_PYR-1 IVVVGTARDAAEALRRAQELHPDVALVDVDLGAESGFDVAER----LDDV MSMEG_0981|M.smegmatis_MC2_155 VEVVGVASNSAEAMVFCRELQPDVVLVDIALGAESGFELTEKLLGDLEPR Mflv_0730|M.gilvum_PYR-GCK IDVVAEADDGTAALAAIREHRPAVALLDYRMPGMDGAEVAAAVQ--RGAL MAB_0060|M.abscessus_ATCC_1997 ITVVAEAENGTGALELIREHRPDVALVDYRMPELDGTQVAAAVR--RDEL Mb0867c|M.bovis_AF2122/97 VNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVPAAVR--SYEL Rv0844c|M.tuberculosis_H37Rv VNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVR--SYEL MMAR_4782|M.marinum_M VNVVGEADDGAAALELIKTHLPDVALLDYRMPRMDGAQVAAAVR--SNEL MAV_4114|M.avium_104 FAVVATADGVATAQRRAGVVRPDVVVMDMQLPDGDGAQATAAVL--AVSP TH_3563|M.thermoresistible__bu LSVVATADGVAAARRRAAAVRPDVVLMDMRLPDGDGARATAEVR--AVSP MLBr_02123|M.leprae_Br4923 -FEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALR--AMDN MUL_0248|M.ulcerans_Agy99 -FEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALR--AMDN *. * . : * * . ::* : .* Mvan_2072|M.vanbaalenii_PYR-1 P--VILTSTHDEQDFADLIAASPALGFLPKLTLSPAAVRKLLDRVSGSPG MSMEG_0981|M.smegmatis_MC2_155 PPAVILISTYDEQDLSEMIASSPAVGFVPKFALSVPAIQNLLATI----- Mflv_0730|M.gilvum_PYR-GCK PTRVLLISAHDESAIVYRALADGAAGFLPKESTRNELITAVLDCAKGRDV MAB_0060|M.abscessus_ATCC_1997 PTRVLLLSAHDDAAIVYRALEEGAAGFLSKESTRTELVGAVLDCARGRDV Mb0867c|M.bovis_AF2122/97 PTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKGRDV Rv0844c|M.tuberculosis_H37Rv PTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKGRDV MMAR_4782|M.marinum_M PTRVLLISAHDESAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKGRDV MAV_4114|M.avium_104 SSRVLVLSASDERDDVLQAVKAGAAGYLVKSASKAELAQAVTDTAAGRAV TH_3563|M.thermoresistible__bu DSRVLVLSASEERDDVLEAVKAGATGYLVKSASKTELVDAVHATAQGRAV MLBr_02123|M.leprae_Br4923 DVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGA MUL_0248|M.ulcerans_Agy99 DVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGA * : *: .. * .:: * : Mvan_2072|M.vanbaalenii_PYR-1 T------------------------------------------------- MSMEG_0981|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0730|M.gilvum_PYR-GCK VAPSLAAGLAG---EIRRRAE-----PEGPALSPREREVLVLIAAGSTIP MAB_0060|M.abscessus_ATCC_1997 VAASLTAGLAG---EIRKRAQ-----PAGPSLSTREREVLRMIAAGQTVP Mb0867c|M.bovis_AF2122/97 VAPSLVGGLAG---EIRQRAA-----PVAPVLSAREREVLNRIACGQSIP Rv0844c|M.tuberculosis_H37Rv VAPSLVGGLAG---EIRQRAA-----PVAPVLSAREREVLNRIACGQSIP MMAR_4782|M.marinum_M VAPSLVGGLAG---EIRQRAA-----PMAPVLSAREREVLHRIAKGQSIP MAV_4114|M.avium_104 FTPSLAGLVLG---EYRRIAQSKDDGPTRPRLTDRETEVLRYVAKGLSAK TH_3563|M.thermoresistible__bu FTPGLAGLVLG---EYRRISRQPGAGPDAPRLTERETEILRYVAKGLTAK MLBr_02123|M.leprae_Br4923 TATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTV MUL_0248|M.ulcerans_Agy99 TATSSSEIITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAV Mvan_2072|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_0981|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0730|M.gilvum_PYR-GCK AMARELFLAPS---------TVKTHVQRLYEKLGVSDRGAAVAEAMRRKL MAB_0060|M.abscessus_ATCC_1997 AIARALFLAPS---------TVKTHVQRLYEKLGVGDRAAAVAEAMRRGL Mb0867c|M.bovis_AF2122/97 AIAAELYVAPS---------TVKTHVQRLYEKLGVSDRAAAVAEAMRQRL Rv0844c|M.tuberculosis_H37Rv AIAAELYVAPS---------TVKTHVQRLYEKLGVSDRAAAVAEAMRQRL MMAR_4782|M.marinum_M AIAGELYVAPS---------TVKTHVQRLYEKLGVSDRAAAVAEAMRQGL MAV_4114|M.avium_104 QIAEKLSLSHR---------TVENHVQATFRKLQVANRVELARYAIEHGL TH_3563|M.thermoresistible__bu QIAAQLSLSHR---------TVENHVQATFRKLQVANRVELARYAIEHGL MLBr_02123|M.leprae_Br4923 LSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGF MUL_0248|M.ulcerans_Agy99 LSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGF Mvan_2072|M.vanbaalenii_PYR-1 ----- MSMEG_0981|M.smegmatis_MC2_155 ----- Mflv_0730|M.gilvum_PYR-GCK LD--- MAB_0060|M.abscessus_ATCC_1997 LE--- Mb0867c|M.bovis_AF2122/97 LD--- Rv0844c|M.tuberculosis_H37Rv LD--- MMAR_4782|M.marinum_M LD--- MAV_4114|M.avium_104 DEEP- TH_3563|M.thermoresistible__bu DE--- MLBr_02123|M.leprae_Br4923 VLRMQ MUL_0248|M.ulcerans_Agy99 VLRMH