For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TDTTDGFIHLDDLAEPRYSPAAQQLREMMATLAADCPLDTDILHARAREATGLDDFGPQDYRERLDRYVA ELREIDMHGPGIVNFHAQLVQWLKNRLLLTDLLARHPEIEDIELVAPVVIAGLPRSGTTHLHNMLASAPT FRSLPYWESVEPFPLPAEAGIEPDPRVGRMDVAVQTMDLLMPHFALMHEMTTDHVHEEIQLLANDFSTML MDTLAHVPRWTDYFWSTDQTSSYRYLVTQLKALQFLRGGRRWILKSPQHLGQLPVLDEVMPGVVVVFTHR DPVPVALSMIAMVTYSERMHRDKVDVPTVARAWVDRLEHLLNACVRDRDIIPTERSADITFDAFMADEIG TAERVYRVAGEPLTEESRSAIGRYLDGHRRGRHGRVYTSAEMFGLDPEELRDRFTPYMGWMRNRPARCSQ AKVTSALG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1960 | - | - | 100% (429) | hypothetical protein Mvan_1960 |
M. vanbaalenii PYR-1 | Mvan_2230 | - | e-109 | 48.88% (403) | hypothetical protein Mvan_2230 |
M. vanbaalenii PYR-1 | Mvan_2324 | - | 8e-41 | 32.36% (377) | hypothetical protein Mvan_2324 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3559c | - | 4e-33 | 28.88% (374) | hypothetical protein Mb3559c |
M. gilvum PYR-GCK | Mflv_4385 | - | 0.0 | 79.68% (379) | hypothetical protein Mflv_4385 |
M. tuberculosis H37Rv | Rv3529c | - | 4e-33 | 28.88% (374) | hypothetical protein Rv3529c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3968 | - | 7e-48 | 29.55% (396) | putative sulfotransferase |
M. marinum M | MMAR_0341 | - | 1e-154 | 69.11% (382) | hypothetical protein MMAR_0341 |
M. avium 104 | MAV_5164 | - | 1e-161 | 67.41% (402) | hypothetical protein MAV_5164 |
M. smegmatis MC2 155 | MSMEG_5930 | - | 2e-40 | 29.11% (371) | hypothetical protein MSMEG_5930 |
M. thermoresistible (build 8) | TH_0375 | - | 2e-33 | 29.79% (376) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4363 | - | 2e-75 | 39.81% (422) | hypothetical protein MUL_4363 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_1960|M.vanbaalenii_PYR-1 --MTDTTDGFIHLDDLAEPRYSPAAQQLREMMATLAADCPLDTDILHARA Mflv_4385|M.gilvum_PYR-GCK -------------------------------MASLAADCPLDAEVLHTRA MMAR_0341|M.marinum_M ------------------------------MMAALAPDCSLDSDALHAKA MAV_5164|M.avium_104 --------MTVRLEDLAEPQFSAEGQQILDMMAAMAPQCPLDADALHAQA MUL_4363|M.ulcerans_Agy99 MEPSSTDIADIDFDDLTRPVLTDVQRQV--LQFTESRHVEFDIAALLAEA Mb3559c|M.bovis_AF2122/97 ------------------------------MTRRPDRKDVATVDELHASA Rv3529c|M.tuberculosis_H37Rv ------------------------------MTRRPDRKDVATVDELHASA MSMEG_5930|M.smegmatis_MC2_155 ---------------------------------------MGTVEDLHASA TH_0375|M.thermoresistible__bu ------------------------------MTPR---TDVGTVEDLHASA MAB_3968|M.abscessus_ATCC_1997 ------------------------------MRAGFKAARPWPIRALNRVG * . Mvan_1960|M.vanbaalenii_PYR-1 REATGL-DDFGPQD-YR-------------------ERLDRYVAELREID Mflv_4385|M.gilvum_PYR-GCK REATGL-DDFGPDD-YR-------------------ERLEMYLAELREID MMAR_0341|M.marinum_M SADTGL-HDFGDDD-YR-------------------ERLDVYLAALAEID MAV_5164|M.avium_104 SADTGL-HDFGPDD-YR-------------------ERLEVYLTALREID MUL_4363|M.ulcerans_Agy99 VDQAGVGDDLGDTDGFG-------------------NRLRAHVAAIEGDQ Mb3559c|M.bovis_AF2122/97 TKLVGLDDFGTDDDNYR-------------------EALGVLLDAYQGEA Rv3529c|M.tuberculosis_H37Rv TKLVGLDDFGTDDDNYR-------------------EALGVLLDAYQGEA MSMEG_5930|M.smegmatis_MC2_155 TKATGLDDFGTDDDNYR-------------------EALGVLLESYQRDA TH_0375|M.thermoresistible__bu VKACGLEDFGSDDDNYK-------------------EALAVLLDSYQREA MAB_3968|M.abscessus_ATCC_1997 NPLTGIGAAPTLDTQWLRSAARRATGLEWVADAYLDDALEVLAASLRNDA *: : : * Mvan_1960|M.vanbaalenii_PYR-1 -MHGPGIVNFHAQLVQWLKNRLLLTDLLARHPEIEDIELVAPVVIAGLPR Mflv_4385|M.gilvum_PYR-GCK -MHAPGVVNFHVQLVQWLKNRLLLTDLLTRHPEIEEIELLPPVVIAGLPR MMAR_0341|M.marinum_M GMQPAGVVNFYGQLLQLLKNRLLLSELRHRHPEIDDIELQPPVVIAGLPR MAV_5164|M.avium_104 GLHAAGTVNFYGQLLQILKNRLLLTDLLKRHPEIHDIELRSPVVIAGLPR MUL_4363|M.ulcerans_Agy99 GLTQLTRSSLRQRVVRLLRNRLSLTDLIRRYPEIESIRIEKPFVVVGMPR Mb3559c|M.bovis_AF2122/97 GLTVLGSKMNRFFLRGALVARLLSQSAWKQYPEHVDVAIKRPIFVTGLVR Rv3529c|M.tuberculosis_H37Rv GLTVLGSKMNRFFLRGALVARLLSQSAWKQYPEHVDVAIKRPIFVTGLVR MSMEG_5930|M.smegmatis_MC2_155 HLTELGSKMSRFFLRNALVARLLSEASWKANPQYADVEIERPIFVTGLPR TH_0375|M.thermoresistible__bu DLTELGSKMSRFFLRNALVARLVSEAAWKQYPQHADVVIERPIFVTGLPR MAB_3968|M.abscessus_ATCC_1997 KLSFLGRKMVQVRLVGMLSTRLRLRELIRKNPGIAQLPVEPPIVIVGLQR : : * ** * .: : *..:.*: * Mvan_1960|M.vanbaalenii_PYR-1 SGTTHLHNMLASAPTFRSLPYWESVEPFPLPAEAG--IEPDPRVGRMDVA Mflv_4385|M.gilvum_PYR-GCK SGTTHLHNLLAAAPTFRSLPYWESVEPFPLPAEQG--VEPDPRIGRMDLA MMAR_0341|M.marinum_M TGTTHLHNMLAAPTTFRTMPYWESVEPFPLPQEAG--VEPDPRLVRMDVA MAV_5164|M.avium_104 TGTTHLHNLLAAPPTFRTMPYWESVEPFPMPNEVG--VQPDPRRTRMDVA MUL_4363|M.ulcerans_Agy99 SGTTHLVNLLAADPRRRALPYWESQDPIPARGQGPDIFGVDPRYTRAKTE Mb3559c|M.bovis_AF2122/97 TGTTALHRLLGADPAHQGLHMWLAEYPQPRPPRET--WESNPLYRQLDAQ Rv3529c|M.tuberculosis_H37Rv TGTTALHRLLGADPAHQGLHMWLAEYPQPRPPRET--WESNPLYRQLDAQ MSMEG_5930|M.smegmatis_MC2_155 TGTTVLHRLLTADPAHQGLEMWLAEFPQPRPPRET--WPDNPVYQQLAAS TH_0375|M.thermoresistible__bu TGTTALHRLLAADPAHQGLELWLAEFPQPRPPRET--WPDNPIYRQLEAQ MAB_3968|M.abscessus_ATCC_1997 TGTTLLHRLLAADPSAGSMSSWEGASPLPHPEQPS--GAPDLRIAQAAKD :*** * .:* : . : * . * * . : : Mvan_1960|M.vanbaalenii_PYR-1 VQTMDLLMPHFALMHEMTTDHVHEEIQLLANDFSTMLMDTLAHVPRWTDY Mflv_4385|M.gilvum_PYR-GCK LQTMDLLMPHFALMHEMTTDHAHEEIQLLANDFSTMLMETLAHVPRWTEY MMAR_0341|M.marinum_M VGVINTVMPHFALMHEMTADHVHEEIQLLANDFSTMLFETLGHVPRWRDY MAV_5164|M.avium_104 VAVINTVMPHFALMHEMTTDHVHEEIQLLANDVSTMLLETLAEVPRWRAY MUL_4363|M.ulcerans_Agy99 HDALMATAPVVAAMHDRFPEAIEEEVELLDLDLASYVLEWHARVPDWRDY Mb3559c|M.bovis_AF2122/97 FTQHHAENPGYTGLHFMAAYELEECWQLLRQSLHSVSYEALAHVPSYADW Rv3529c|M.tuberculosis_H37Rv FTQHHAENPGYTGLHFMAAYELEECWQLLRQSLHSVSYEALAHVPSYADW MSMEG_5930|M.smegmatis_MC2_155 FSQHHQENPDYTGLHFMTADEVEECWQLLRQSLHSVSYETLAHLPTYANW TH_0375|M.thermoresistible__bu FTKAHQENPDYTGLHFMTAGEVEECWQLLRQSVHSVSYETLAHVPSYARW MAB_3968|M.abscessus_ATCC_1997 ERSLRYLAPQFFAIHSVEAEAPEEDVLLLDFALHSQMPEVMFHVPGYAKW * :* . .* ** . : : .:* : : Mvan_1960|M.vanbaalenii_PYR-1 FWSTDQTSSYRYLVTQLKALQFLRGGRRWILKSPQHLGQLPVLDEVMPGV Mflv_4385|M.gilvum_PYR-GCK YWNRDQTPTYEYLVTQLKALQFLRGGGRWVLKSPQHLAQLPVIGRVLPGV MMAR_0341|M.marinum_M YETHDQTPHYQYLATQLKAMQFLRGGRRWLLKSPQHLEQVPVLDRVFPGS MAV_5164|M.avium_104 YQAHDQTPHYEYLATQLRAMQFLRGGRRWLLKSPQHLEQVPVLDRVFPDS MUL_4363|M.ulcerans_Agy99 YLGLDQRRHYAYLKKVLQALTFLRGPQTWVLKRPQHCEQLGPLMATFPDA Mb3559c|M.bovis_AF2122/97 LSRQDWTPSYCRHRRNLQLIGLNDAEKRWVLKNPSHLFALDALMATYPDA Rv3529c|M.tuberculosis_H37Rv LSRQDWTPSYCRHRRNLQLIGLNDAEKRWVLKNPSHLFALDALMATYPDA MSMEG_5930|M.smegmatis_MC2_155 LAQQDWTRPYQRHRRNLQLIGLNDAEKRWVLKNPSHLFALDALFATYPDA TH_0375|M.thermoresistible__bu LARQDWTKPYQRHRRNLQLIGLNDVEKRWVLKNPSHLFALDALFATYPDA MAB_3968|M.abscessus_ATCC_1997 LADQDMTPAYELHRLLLQVLQWQQPRGRWVLKTPAHLEHLDVLLRVYPGA * * *: : *:** * * : : . *. Mvan_1960|M.vanbaalenii_PYR-1 VVVFTHRDPVPVALSMIAMVTYSERMHRDKVDVPTVARAWVDRLEHLLNA Mflv_4385|M.gilvum_PYR-GCK RVVFTHRDPVPVALSMIAMVTYSARMHRDHVDVPVVAAAWVDRLEKLLDA MMAR_0341|M.marinum_M IVLFTHRDPVPVALSMLAMITYSARMHRWPVPVEQIAHYWVDRLDRMLAT MAV_5164|M.avium_104 IVVFTHRDPVPVALSMIAMITYSARMHRSPVPVRQIAESWIDRLGQMLAA MUL_4363|M.ulcerans_Agy99 TVAFTHRDPVAVIQSTITMMAYSDRLRRTSIDAGWLLDYWSDRVYPLLWA Mb3559c|M.bovis_AF2122/97 LVVQTHRPVETIMASMCSLAQHTTEGWSTKFVGAQIGADAMDTWSRGLER Rv3529c|M.tuberculosis_H37Rv LVVQTHRPVETIMASMCSLAQHTTEGWSTKFVGAQIGADAMDTWSRGLER MSMEG_5930|M.smegmatis_MC2_155 LVIQCHRPAETIMASMCSLSAHTTAGWSNTFVGAQIGADAMDTWARGLEA TH_0375|M.thermoresistible__bu LVVQCHRPAETIMASMCSLSQHTTAGWSNTFVGAQIGADAMETWTRGLRL MAB_3968|M.abscessus_ATCC_1997 VVVWTHRDPAQTTASSSSMLAHYQALFSDRVDHHELARYWLGKNAQIIDR * ** * :: : . : : Mvan_1960|M.vanbaalenii_PYR-1 CVRDRDIIPTERSADITFDAFMADEIGTAERVYRVAGEPLTEESRSAIGR Mflv_4385|M.gilvum_PYR-GCK CVRDREVIAPDRSLDVRFDDFMADELGVAESIYALTGEDFDGRSRAAVAQ MMAR_0341|M.marinum_M LVRDRDTIGPERSIDIRFDDFMADEVGVAERIYALAGEPFTDSVRTATAG MAV_5164|M.avium_104 LVRDRDVIGPDRSIDIRFDDFMADELGVAERVYALADEPFTDDARAAVAD MUL_4363|M.ulcerans_Agy99 CVRDRDIVPPDRSIDIGFHQLNGNEMALLDELYRCSGVAITPKVRGLFQQ Mb3559c|M.bovis_AF2122/97 FNAARAKYDSAQFYDVDYHDLIADPLGTVADIYRHFGLTLSDEARQAMTT Rv3529c|M.tuberculosis_H37Rv FNAARAKYDSAQFYDVDYHDLIADPLGTVADIYRHFGLTLSDEARQAMTT MSMEG_5930|M.smegmatis_MC2_155 FTAERAKHDPAQFLDVDYDDFVADPLATVESVYRHFGMPYTDAARAAVTE TH_0375|M.thermoresistible__bu FNEARANYDPAQFHDVEYADFVKDPIGTVEGIYRHFGLEFTDAARDAMTR MAB_3968|M.abscessus_ATCC_1997 AIAVRAEHP-AAFVDINYTELLDDPIAAVQRIYHAADRRLSDDALTAMRV * *: : : : :. :* . Mvan_1960|M.vanbaalenii_PYR-1 YLDGHRRGRHGRVYTSAE-MFGLDPEELRDRFTPYMGWMRNRPARCSQAK Mflv_4385|M.gilvum_PYR-GCK YLQSHRRGRHGRVHTSAD-MFGLDPEELRERFAPYS------------AR MMAR_0341|M.marinum_M YLAGHQRGRLGAVQTSCE-MFGLTEESLRERFAPYL------------KR MAV_5164|M.avium_104 YLAGHRRGRLGNVETSYE-MFGLDEDSLRERFAPYV------------ER MUL_4363|M.ulcerans_Agy99 YLDGNPRGKHGRVRYHLQRHFGSSAEQLRERFDFYF------------DR Mb3559c|M.bovis_AF2122/97 VHAESQSGARAPKHSYSLADYGLTVEMVKERFAGL--------------- Rv3529c|M.tuberculosis_H37Rv VHAESQSGARAPKHSYSLADYGLTVEMVKERFAGL--------------- MSMEG_5930|M.smegmatis_MC2_155 VYEASRRGPRAPKHTYSLADYGLTSEAVKERFTGL--------------- TH_0375|M.thermoresistible__bu LHTESQRGPRAPRHSYSLADYGLTAESVRDAFSGL--------------- MAB_3968|M.abscessus_ATCC_1997 SLQQNRQHKHG-EHRYSLAQFGLTIAEVDAAYRRYI------------DH . :* : : Mvan_1960|M.vanbaalenii_PYR-1 VTSALG-------- Mflv_4385|M.gilvum_PYR-GCK FLS----------- MMAR_0341|M.marinum_M FLG----------- MAV_5164|M.avium_104 FLA----------- MUL_4363|M.ulcerans_Agy99 FDVRPE-------- Mb3559c|M.bovis_AF2122/97 -------------- Rv3529c|M.tuberculosis_H37Rv -------------- MSMEG_5930|M.smegmatis_MC2_155 -------------- TH_0375|M.thermoresistible__bu -------------- MAB_3968|M.abscessus_ATCC_1997 FAIQTERGGVRGDR