For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGIGIQIEGLTKSFGAQRIWEDVTFDLPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGKIIVDGTNIIE CSAKELYEIRTLFGVMFQDGALFGSMSLYDNTAFPLREHTKKKESEIRQIVMEKLDLVGLGGDESKFPGE ISGGMRKRAGLARSLVLDPQIILCDEPDSGLDPVRTAYLSQLLIDINAQIDCTILIVTHNINIARTVPDN MGMLFRKKLVMFGPREVLLTSDEPVVKQFLNGRRLGPIGMSEEKDESTMAEEQAMADAGHHDGGVEEIEG VPPQIQATPGMPERQAVARRQARVREIMHTLPPAAQAAIRDDLEGTHQFPSHQFAGEPAVRHEDDAPTGR IPVSGER
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1254 | - | - | 100% (357) | ABC transporter-related protein |
M. vanbaalenii PYR-1 | Mvan_3884 | - | 5e-34 | 31.06% (264) | ABC transporter-related protein |
M. vanbaalenii PYR-1 | Mvan_3872 | - | 9e-34 | 35.02% (237) | sulfate ABC transporter, ATPase subunit |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0674 | mkl | 1e-169 | 87.39% (333) | ribonucleotide ABC transporter ATP-binding protein |
M. gilvum PYR-GCK | Mflv_5099 | - | 0.0 | 90.33% (362) | ABC transporter related |
M. tuberculosis H37Rv | Rv0655 | mkl | 1e-169 | 87.39% (333) | ribonucleotide ABC transporter ATP-binding protein |
M. leprae Br4923 | MLBr_01892 | - | 1e-166 | 84.43% (334) | ABC transporter ATP-binding protein |
M. abscessus ATCC 19977 | MAB_3871c | - | 1e-170 | 80.32% (371) | ribonucleotide ABC transporter ATP-binding protein |
M. marinum M | MMAR_0994 | mkl | 1e-165 | 86.89% (328) | ribonucleotide-transport ATP-binding protein ABC transporter, |
M. avium 104 | MAV_4504 | - | 1e-166 | 84.68% (333) | ABC transporter, ATP-binding protein |
M. smegmatis MC2 155 | MSMEG_1366 | - | 1e-164 | 80.06% (356) | ABC transporter, ATP-binding protein |
M. thermoresistible (build 8) | TH_4213 | - | 1e-170 | 88.36% (335) | PUTATIVE ABC transporter-related protein |
M. ulcerans Agy99 | MUL_0745 | mkl | 1e-165 | 86.59% (328) | ribonucleotide-transport ATP-binding protein ABC transporter, |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0994|M.marinum_M -----------------------MGVAIEVNGLTKSFGSSRIWEDVTLTI MUL_0745|M.ulcerans_Agy99 -----------------------MGVAIEVNGLTKSFGSSRIWEDVTLTI Mb0674|M.bovis_AF2122/97 MRYSDSYHTTGRWQPRASTEGFPMGVSIEVNGLTKSFGSSRIWEDVTLTI Rv0655|M.tuberculosis_H37Rv MRYSDSYHTTGRWQPRASTEGFPMGVSIEVNGLTKSFGSSRIWEDVTLTI MLBr_01892|M.leprae_Br4923 ---------------------MPMGVAIEVKGLTKSFGSSRIWEDVTLDI MAV_4504|M.avium_104 -----------------------MGVAIEVNGLTKSFGSSRIWEDVTLEI MSMEG_1366|M.smegmatis_MC2_155 -----------------------MGVQIDVTGLSKSFGSSKIWEDVTMSI MAB_3871c|M.abscessus_ATCC_199 ----------------MLRKERLVGAEVSVEGLTKSFGSQRIWENVTLSL Mvan_1254|M.vanbaalenii_PYR-1 -----------------------MGIGIQIEGLTKSFGAQRIWEDVTFDL TH_4213|M.thermoresistible__bu -----------------------------------------------MDI Mflv_5099|M.gilvum_PYR-GCK -----------------------MGIGIQVEGLTKSFGSQRIWEDVTFDL : : MMAR_0994|M.marinum_M PAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSILIDGTDIIECSAKELY MUL_0745|M.ulcerans_Agy99 PAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSILIDGTDIIECSAKELY Mb0674|M.bovis_AF2122/97 PAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSIIIDGTDIIECSAKELY Rv0655|M.tuberculosis_H37Rv PAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSIIIDGTDIIECSAKELY MLBr_01892|M.leprae_Br4923 PAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSILIDGTDIIECSAKELY MAV_4504|M.avium_104 PAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSVVIDGTDILQCSAKELY MSMEG_1366|M.smegmatis_MC2_155 PAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSIVIDGTDILQCSAKELY MAB_3871c|M.abscessus_ATCC_199 PPGEVSVLLGPSGTGKSVFLKSLIGLLRPEQGAIYIDGTNIMECSSKELY Mvan_1254|M.vanbaalenii_PYR-1 PAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGKIIVDGTNIIECSAKELY TH_4213|M.thermoresistible__bu PAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGKIIVDGTNIIDCTAKELY Mflv_5099|M.gilvum_PYR-GCK PAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGKIVVDGTNIIECSAKELY *.****************************:* : :***:*::*::**** MMAR_0994|M.marinum_M EIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLAM MUL_0745|M.ulcerans_Agy99 EIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLAM Mb0674|M.bovis_AF2122/97 EIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLAL Rv0655|M.tuberculosis_H37Rv EIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLAL MLBr_01892|M.leprae_Br4923 EIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLQL MAV_4504|M.avium_104 EIRTLFGVMFQDGALFGSMNLFDNAAFPLREHTKKKESEIRDIVMEKLEL MSMEG_1366|M.smegmatis_MC2_155 EIRTLFGVLFQDGALFGSMNIYDNTAFPLREHTKKSESEIRKIVMEKLDL MAB_3871c|M.abscessus_ATCC_199 EIRKLFGVMFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMQKLDV Mvan_1254|M.vanbaalenii_PYR-1 EIRTLFGVMFQDGALFGSMSLYDNTAFPLREHTKKKESEIRQIVMEKLDL TH_4213|M.thermoresistible__bu EIRTLFGVMFQDGALFGSMSIYDNTAFPLREHTKKKESEIRKIVMEKLEL Mflv_5099|M.gilvum_PYR-GCK EIRTLFGVMFQDGALFGSMSLYDNTAFPLREHTKKKESEIRKIVMEKLDL ***.****:**********.::**:**********.*****.***:** : MMAR_0994|M.marinum_M VGLTGDEKKFPGEISGGMRKRAGLARALVLDPQIILCDEPDSGLDPVRTA MUL_0745|M.ulcerans_Agy99 VGLTGDEKKFPGEISGGMRKRAGLARALVLDPQIILCDEPDSGLDPVRTA Mb0674|M.bovis_AF2122/97 VGLGGDEKKFPGEISGGMRKRAGLARALVLDPQIILCDEPDSGLDPVRTA Rv0655|M.tuberculosis_H37Rv VGLGGDEKKFPGEISGGMRKRAGLARALVLDPQIILCDEPDSGLDPVRTA MLBr_01892|M.leprae_Br4923 VGLGGDEKKFPGEISGGMRKRAGLARALVLDPQIILCDEPDSGLDPVRTA MAV_4504|M.avium_104 VGLGGDEKKFPGEISGGMRKRASLARALVMDPQIILCDEPDSGLDPVRTA MSMEG_1366|M.smegmatis_MC2_155 VGMPNDGHKFPGEISGGMRKRAGLARALVLDPEIILCDEPDSGLDPVRTA MAB_3871c|M.abscessus_ATCC_199 VGLTGHETKFPGEISGGMRKRAGLARSLVLDPQIILCDEPDSGLDPVRTA Mvan_1254|M.vanbaalenii_PYR-1 VGLGGDESKFPGEISGGMRKRAGLARSLVLDPQIILCDEPDSGLDPVRTA TH_4213|M.thermoresistible__bu VGLAGDENKFPGEISGGMRKRAGLARSLVLDPQIILCDEPDSGLDPVRTA Mflv_5099|M.gilvum_PYR-GCK VGLGGDEDKFPGEISGGMRKRAGLARSLVLDPQIILCDEPDSGLDPVRTA **: .. **************.***:**:**:***************** MMAR_0994|M.marinum_M YLSQLIMDINAQIDATILIVTHNINIARTVPDNMGMLFRKHLVMFGPREV MUL_0745|M.ulcerans_Agy99 YLSQLIMDINAQIDATILIVTHNINIARTVPDNMGMLFRKHLVMFGPREV Mb0674|M.bovis_AF2122/97 YLSQLIMDINAQIDATILIVTHNINIARTVPDNMGMLFRKHLVMFGPREV Rv0655|M.tuberculosis_H37Rv YLSQLIMDINAQIDATILIVTHNINIARTVPDNMGMLFRKHLVMFGPREV MLBr_01892|M.leprae_Br4923 YLSQLIMDINAQIDATILIVTHNVNIARTVPDNMGMLFRKHLVMFGPREV MAV_4504|M.avium_104 YLSQLILDINAQIDATVLIVTHNINIARTVPDNMGMLFRRKLVMFGPREV MSMEG_1366|M.smegmatis_MC2_155 YLSQLLIDINAQIDATVLIVTHNINIARTVPDNMGMLFRKQLVMFGPREV MAB_3871c|M.abscessus_ATCC_199 YLSQLLIDINAQIDATILIVTHNINIARTVPDNMGMLYRRNLVMFGPREV Mvan_1254|M.vanbaalenii_PYR-1 YLSQLLIDINAQIDCTILIVTHNINIARTVPDNMGMLFRKKLVMFGPREV TH_4213|M.thermoresistible__bu YLSQLLIDINAQIDCTILIVTHNINIARTVPDNIGMLFRKRLVMFGPREV Mflv_5099|M.gilvum_PYR-GCK YLSQLLIDINAQIDCTILIVTHNINIARTVPDNMGMLFRKHLVMFGPREV *****::*******.*:******:*********:***:*:.********* MMAR_0994|M.marinum_M LLTSDEPVVRQFLNGRRIGPIGMSEEKDEATMAEEQAMIDAGQHAGGTED MUL_0745|M.ulcerans_Agy99 LLASDEPVVRQFLNGRRIGPIGMSEEKDEATMAEEQAMIDAGQHAGGTED Mb0674|M.bovis_AF2122/97 LLTSDEPVVRQFLNGRRIGPIGMSEEKDEATMAEEQALLDAGHHAGGVEE Rv0655|M.tuberculosis_H37Rv LLTSDEPVVRQFLNGRRIGPIGMSEEKDEATMAEEQALLDAGHHAGGVEE MLBr_01892|M.leprae_Br4923 LLTSDEPVVRQFLNGRRIGPIGMSEEKDESTMAEEAALLEAGHYAGGAEE MAV_4504|M.avium_104 LLTSDEPVVKQFLNGRRIGPIGMSEEKDEATMAEEQAALEAGQHAGGVEE MSMEG_1366|M.smegmatis_MC2_155 LLTSEEPVVKQFLNGRRIGPIGMSEEKDEATAAAEQALVDAGQHDGGVEE MAB_3871c|M.abscessus_ATCC_199 LLTSDEPVIKQFLNGRRIGPIGMSEEKDEATMAEEQAHLDAGHHDGGVEE Mvan_1254|M.vanbaalenii_PYR-1 LLTSDEPVVKQFLNGRRLGPIGMSEEKDESTMAEEQAMADAGHHDGGVEE TH_4213|M.thermoresistible__bu LLTSDEPVVRQFLNGRRIGPIGMSEEKDELTMAEEQAMVDAGHHDGGVEE Mflv_5099|M.gilvum_PYR-GCK LLTSDEPVVKQFLNGRRIGPIGMSEEKDESTMAEEQAMVDAGHHDGGTEE **:*:***::*******:*********** * * * * :**:: **.*: MMAR_0994|M.marinum_M IEGVPPQIQATPGMPERKAVARRQARVREMLHTLPKDAQAAILEDLEG-- MUL_0745|M.ulcerans_Agy99 IEGVPPQIQATPGMPERKAVARRQARVREMLHTLPKDAQAAILEDLEG-- Mb0674|M.bovis_AF2122/97 IEGVPPQISATPGMPERKAVARRQARVREMLHTLPKKAQAAILDDLEG-- Rv0655|M.tuberculosis_H37Rv IEGVPPQISATPGMPERKAVARRQARVREMLHTLPKKAQAAILDDLEG-- MLBr_01892|M.leprae_Br4923 VEGVPPQITVTPGMPKRKAVARRQARVRAMLPTLPKGAQAAILDDLEG-- MAV_4504|M.avium_104 IEGVPPQIVASPGMPERKAVARRQARVREILHTLPQKAQAAILDDLEG-- MSMEG_1366|M.smegmatis_MC2_155 IEGVPPQLQATPGMPERKAVARRKARVREILHTLPPAAQAAILEELDRDQ MAB_3871c|M.abscessus_ATCC_199 IEGVPPQIQATPGMPERKAVGRRQARVREIMHQLPPNAQAAIQDSFAG-- Mvan_1254|M.vanbaalenii_PYR-1 IEGVPPQIQATPGMPERQAVARRQARVREIMHTLPPAAQAAIRDDLEG-- TH_4213|M.thermoresistible__bu IVGVPPQLTATPGMPERQAVHRRRARVREILHTLPPAAQAAIRDDLEG-- Mflv_5099|M.gilvum_PYR-GCK IEGVPPQVMATPGMPERKAVGRRQARVREIMHTLPPAAQEAIRADLEN-- : *****: .:****:*:** **:**** :: ** ** ** .: MMAR_0994|M.marinum_M ---------------THR-------------------------------- MUL_0745|M.ulcerans_Agy99 ---------------THR-------------------------------- Mb0674|M.bovis_AF2122/97 ---------------THKYA--VHEIGQ---------------------- Rv0655|M.tuberculosis_H37Rv ---------------THKYA--VHEIGQ---------------------- MLBr_01892|M.leprae_Br4923 ---------------AHNYQ--AHEFGD---------------------- MAV_4504|M.avium_104 ---------------THKYR--AHEVGD---------------------- MSMEG_1366|M.smegmatis_MC2_155 PQLSAPTTQTAATAPVENYD--DSPTGVIEV--------PKQA------- MAB_3871c|M.abscessus_ATCC_199 ---------------THQYR--VHDFGDEPTGVTTATLAPPQAEQPTQSI Mvan_1254|M.vanbaalenii_PYR-1 ---------------THQFP--SHQFAGEPAVRH---EDDAPTGRIPVSG TH_4213|M.thermoresistible__bu ---------------THKYR--ADEFGDSGAGQHRAHEDDAPTASIPVAG Mflv_5099|M.gilvum_PYR-GCK ---------------TQQTQPYPDGYSDGTTAHHARHDDETPTGRIPVAG ... MMAR_0994|M.marinum_M ----------------- MUL_0745|M.ulcerans_Agy99 ----------------- Mb0674|M.bovis_AF2122/97 ----------------- Rv0655|M.tuberculosis_H37Rv ----------------- MLBr_01892|M.leprae_Br4923 ----------------- MAV_4504|M.avium_104 ----------------- MSMEG_1366|M.smegmatis_MC2_155 ----------------- MAB_3871c|M.abscessus_ATCC_199 DTSDDDTPTGQIPPVRG Mvan_1254|M.vanbaalenii_PYR-1 ER--------------- TH_4213|M.thermoresistible__bu EQ--------------- Mflv_5099|M.gilvum_PYR-GCK ER---------------