For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTYVIGSACVDIVDKSCVQECPADCIYEGDRAMYINPNECVDCGACRIACRVDAIYYETDLPDEEMEFLE DNAAFFTMTLAGRDAPLGDPGGAAKVGRVGADTPLVAALPPSTTPHP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0299 | - | - | 100% (117) | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
M. vanbaalenii PYR-1 | Mvan_4529 | - | 9e-32 | 53.15% (111) | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
M. vanbaalenii PYR-1 | Mvan_5031 | - | 1e-12 | 42.86% (84) | 4Fe-4S ferredoxin iron-sulfur binding domain-containing |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2030c | fdxA | 6e-46 | 71.82% (110) | ferredoxin FDXA |
M. gilvum PYR-GCK | Mflv_0383 | - | 5e-64 | 93.16% (117) | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
M. tuberculosis H37Rv | Rv2007c | fdxA | 6e-46 | 71.82% (110) | ferredoxin FDXA |
M. leprae Br4923 | MLBr_01489 | fdxA | 1e-30 | 51.35% (111) | ferredoxin |
M. abscessus ATCC 19977 | MAB_1327 | - | 1e-33 | 51.72% (116) | ferredoxin FdxC |
M. marinum M | MMAR_2994 | fdxA_2 | 5e-47 | 71.43% (112) | ferredoxin FdxA_2 |
M. avium 104 | MAV_3500 | - | 3e-42 | 65.45% (110) | putative ferredoxin FdxA |
M. smegmatis MC2 155 | MSMEG_1124 | - | 3e-41 | 64.86% (111) | putative ferredoxin FdxA |
M. thermoresistible (build 8) | TH_0923 | fdxA | 7e-53 | 79.09% (110) | PROBABLE FERREDOXIN FDXA |
M. ulcerans Agy99 | MUL_3264 | fdxA_1 | 7e-42 | 65.45% (110) | ferredoxin FdxA_1 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_0299|M.vanbaalenii_PYR-1 -------------------------MTYVIGSACVDIVDKSCVQECPADC Mflv_0383|M.gilvum_PYR-GCK MQSRRDQTRDFRPLTTTAARPTVDGMTYVIGSACVDIVDKSCVQECPADC TH_0923|M.thermoresistible__bu -------------------------MTYVIGSACVDVTDKSCVQECPADC Mb2030c|M.bovis_AF2122/97 -------------------------MTYVIGSECVDVMDKSCVQECPVDC Rv2007c|M.tuberculosis_H37Rv -------------------------MTYVIGSECVDVMDKSCVQECPVDC MMAR_2994|M.marinum_M -------------------------MTYVIGRECVDVAEKSCTQECPVDC MAV_3500|M.avium_104 -------------------------MTYVIGKPCIDVMDRACVDECPVDC MUL_3264|M.ulcerans_Agy99 -------------------------MTYVIGKPCIDVTDRACVEECPVDC MLBr_01489|M.leprae_Br4923 -------------------------MTYVIAEPCVDIKDKACIEECPVDC MAB_1327|M.abscessus_ATCC_1997 ----------MYWTGNSPENIEETFVTYTIAEPCVDVMDKACIEECPVDC MSMEG_1124|M.smegmatis_MC2_155 -------------------------MTYVIGRPCVDVKDRACVDECPVDC :**.*. *:*: :::* :***.** Mvan_0299|M.vanbaalenii_PYR-1 IYEGDRAMYINPNECVDCGACRIACRVDAIYYETDLPDEEMEFLEDNAAF Mflv_0383|M.gilvum_PYR-GCK IYEGDRAMYINPNECVDCGACRIACRVDAIYYETDLPDEELAFLDDNAAF TH_0923|M.thermoresistible__bu IYEGDRSLYINPNECVDCGACKLVCKVDAIYFEYDLPDEEYRHLADNAAF Mb2030c|M.bovis_AF2122/97 IYEGARMLYINPDECVDCGACKPACRVEAIYWEGDLPDDQHQHLGDNAAF Rv2007c|M.tuberculosis_H37Rv IYEGARMLYINPDECVDCGACKPACRVEAIYWEGDLPDDQHQHLGDNAAF MMAR_2994|M.marinum_M IYEGARTMYINPDECVDCGACKTTCRVGAIYWEEDLPDEQRHHLADNAAF MAV_3500|M.avium_104 IYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDDLPEDLKPHLADNEAF MUL_3264|M.ulcerans_Agy99 IYEGGRSLYIHPDEFVDCGACEPVCPVEAIYYEDDLPQELHPHLADNVAF MLBr_01489|M.leprae_Br4923 IYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDDVPEQWSHYTQINVDF MAB_1327|M.abscessus_ATCC_1997 IYEGGRMLYIHPDECVDCGACEPVCPVEAIFYEDDVPDQWTGYIQSNADF MSMEG_1124|M.smegmatis_MC2_155 IYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDDLPEDLQPYQEENAKF **** * :**:*:* ******. .* * **::* *:*:: . * * Mvan_0299|M.vanbaalenii_PYR-1 FTMTLAGRDAPLGDPGGAAKVGRVGADTPLVAALPPSTTPHP- Mflv_0383|M.gilvum_PYR-GCK FTTTLSGRDEPLGDPGGAAKLGRVGADTPLVAALPASTTPHP- TH_0923|M.thermoresistible__bu FTEILPGRDAPLGDPGGASKIGRIGVDTPLVAGMPK-RSAH-- Mb2030c|M.bovis_AF2122/97 FHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP---- Rv2007c|M.tuberculosis_H37Rv FHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP---- MMAR_2994|M.marinum_M FREILPGRDAPLGSPGGADTVGRIGVDTPLIAAMPPSGL---- MAV_3500|M.avium_104 FAEPLPGRDAPLGSPGGAAKLGPLGVDTPLVASQPSAAHSDGS MUL_3264|M.ulcerans_Agy99 FTETLPGRDGPLGSPGGAAKISRLGVDTPLVAGHPQAADA--- MLBr_01489|M.leprae_Br4923 FVE--------LGSPGGAAKVGMAENDPQVIKNLAPQGEGD-- MAB_1327|M.abscessus_ATCC_1997 FVD--------LGSPGGAAKVGKTDYDPPSVKELPPMGEGH-- MSMEG_1124|M.smegmatis_MC2_155 FTDVLPGRAQPLGSPGGAAKLGVVDADTPMVAELPPQGD---- * **.**** :. *. : .