For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_1327 (-)

annotation: ferredoxin FdxC
coordinates: 1327763 - 1328134
length: 123

MYWTGNSPENIEETFVTYTIAEPCVDVMDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAI
FYEDDVPDQWTGYIQSNADFFVDLGSPGGAAKVGKTDYDPPSVKELPPMGEGH
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_1327--100% (123)ferredoxin FdxC
M. abscessus ATCC 19977MAB_0930-3e-0733.33% (60) putative ferredoxin/ferredoxin--NADP reductase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1210fdxC2e-5282.08% (106) ferredoxin FdxC
M. gilvum PYR-GCKMflv_2170-3e-5483.96% (106) 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
M. tuberculosis H37RvRv1177fdxC2e-5282.08% (106) ferredoxin FdxC
M. leprae Br4923MLBr_01489fdxA7e-5279.44% (107) ferredoxin
M. marinum MMMAR_4274fdxC4e-5383.02% (106) ferredoxin FdxC
M. avium 104MAV_1316-3e-5484.11% (107) ferredoxin
M. smegmatis MC2 155MSMEG_5122-3e-5483.02% (106) ferredoxin
M. thermoresistible (build 8)TH_1830fdxA9e-5483.96% (106) PROBABLE FERREDOXIN FDXA
M. ulcerans Agy99MUL_1025fdxC6e-5383.02% (106) ferredoxin FdxC
M. vanbaalenii PYR-1Mvan_4529-2e-5484.91% (106) 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2170|M.gilvum_PYR-GCK          ---------------MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYI
Mvan_4529|M.vanbaalenii_PYR-1       ---------------MTYVIAEPCVDVKDKACIEECPVDCIYEGARMLYI
MSMEG_5122|M.smegmatis_MC2_155      ---------------MTYVIAEPCVDVKDKACIEECPVDCIYEGARMLYI
TH_1830|M.thermoresistible__bu      ---------------VTYVIAEPCVDVKDKACIEECPVDCIYEGARMLYI
Mb1210|M.bovis_AF2122/97            ---------------MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYI
Rv1177|M.tuberculosis_H37Rv         ---------------MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYI
MLBr_01489|M.leprae_Br4923          ---------------MTYVIAEPCVDIKDKACIEECPVDCIYEGARMLYI
MMAR_4274|M.marinum_M               ---------------MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYI
MUL_1025|M.ulcerans_Agy99           ---------------MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYI
MAV_1316|M.avium_104                ---------------MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYI
MAB_1327|M.abscessus_ATCC_1997      MYWTGNSPENIEETFVTYTIAEPCVDVMDKACIEECPVDCIYEGGRMLYI
                                                   :**.*******: ****************.*****

Mflv_2170|M.gilvum_PYR-GCK          HPDECVDCGACEPVCPVEAIYYEDDVPEQWSAYTQINADFFTELGSPGGA
Mvan_4529|M.vanbaalenii_PYR-1       HPDECVDCGACEPVCPVEAIYYEDDVPDQWSAYTQINADFFVELGSPGGA
MSMEG_5122|M.smegmatis_MC2_155      HPDECVDCGACEPVCPVEAIYYEDDVPDQWSSYAQANADFFAELGSPGGA
TH_1830|M.thermoresistible__bu      HPDECVDCGACEPVCPVEAIYYEDDVPDQWAGYTQINADFFEELGSPGGA
Mb1210|M.bovis_AF2122/97            HPDECVDCGACEPVCPVEAIFYEDDVPEQWSHYTQINADFFAELGSPGGA
Rv1177|M.tuberculosis_H37Rv         HPDECVDCGACEPVCPVEAIFYEDDVPEQWSHYTQINADFFAELGSPGGA
MLBr_01489|M.leprae_Br4923          HPDECVDCGACEPVCPVEAIYYEDDVPEQWSHYTQINVDFFVELGSPGGA
MMAR_4274|M.marinum_M               HPDECVDCGACEPVCPVEAIYYEDDVPEQWSQYTQINADFFAELGSPGGA
MUL_1025|M.ulcerans_Agy99           HPDECVDCGACEPVCPVEAIYYEDDVPEQWSQYTQINADFFAKLGSPGGA
MAV_1316|M.avium_104                HPDECVDCGACEPVCPVEAIYYEDDVPDQWSQYTQINADFFAELGSPGGA
MAB_1327|M.abscessus_ATCC_1997      HPDECVDCGACEPVCPVEAIFYEDDVPDQWTGYIQSNADFFVDLGSPGGA
                                    ********************:******:**: * * *.*** .*******

Mflv_2170|M.gilvum_PYR-GCK          SKVGQTDNDPQAVKDLPPQGED-
Mvan_4529|M.vanbaalenii_PYR-1       SKVGQTDNDPQAVKDLPPQGED-
MSMEG_5122|M.smegmatis_MC2_155      SKVGQTDNDPQAIKDLPPQGED-
TH_1830|M.thermoresistible__bu      SKVGLTENDPQAVKDLPPQGED-
Mb1210|M.bovis_AF2122/97            AKVGMTENDPQAVKDLAPQSEDA
Rv1177|M.tuberculosis_H37Rv         AKVGMTENDPQAVKDLAPQSEDA
MLBr_01489|M.leprae_Br4923          AKVGMAENDPQVIKNLAPQGEGD
MMAR_4274|M.marinum_M               AKVGMTENDPQVVKDLPPQGEED
MUL_1025|M.ulcerans_Agy99           AKVGMTENDPQVVKDLPPQGEED
MAV_1316|M.avium_104                AKVGLTENDPQVVKDLPPQGEGD
MAB_1327|M.abscessus_ATCC_1997      AKVGKTDYDPPSVKELPPMGEGH
                                    :*** :: **  :*:*.* .*