For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDDVPDQWSAYTQI NADFFVELGSPGGASKVGQTDNDPQAVKDLPPQGED*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_4529 | - | - | 100% (107) | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
| M. vanbaalenii PYR-1 | Mvan_0299 | - | 8e-32 | 53.15% (111) | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
| M. vanbaalenii PYR-1 | Mvan_5031 | - | 2e-11 | 39.02% (82) | 4Fe-4S ferredoxin iron-sulfur binding domain-containing |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1210 | fdxC | 3e-58 | 89.72% (107) | ferredoxin FdxC |
| M. gilvum PYR-GCK | Mflv_2170 | - | 2e-62 | 97.20% (107) | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
| M. tuberculosis H37Rv | Rv1177 | fdxC | 3e-58 | 89.72% (107) | ferredoxin FdxC |
| M. leprae Br4923 | MLBr_01489 | fdxA | 8e-58 | 88.68% (106) | ferredoxin |
| M. abscessus ATCC 19977 | MAB_1327 | - | 9e-55 | 84.91% (106) | ferredoxin FdxC |
| M. marinum M | MMAR_4274 | fdxC | 2e-59 | 90.65% (107) | ferredoxin FdxC |
| M. avium 104 | MAV_1316 | - | 2e-59 | 92.45% (106) | ferredoxin |
| M. smegmatis MC2 155 | MSMEG_5122 | - | 1e-61 | 95.33% (107) | ferredoxin |
| M. thermoresistible (build 8) | TH_1830 | fdxA | 3e-61 | 95.33% (107) | PROBABLE FERREDOXIN FDXA |
| M. ulcerans Agy99 | MUL_1025 | fdxC | 4e-59 | 89.72% (107) | ferredoxin FdxC |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1210|M.bovis_AF2122/97 ---------------MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYI
Rv1177|M.tuberculosis_H37Rv ---------------MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYI
MLBr_01489|M.leprae_Br4923 ---------------MTYVIAEPCVDIKDKACIEECPVDCIYEGARMLYI
MMAR_4274|M.marinum_M ---------------MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYI
MUL_1025|M.ulcerans_Agy99 ---------------MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYI
MAV_1316|M.avium_104 ---------------MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYI
Mvan_4529|M.vanbaalenii_PYR-1 ---------------MTYVIAEPCVDVKDKACIEECPVDCIYEGARMLYI
Mflv_2170|M.gilvum_PYR-GCK ---------------MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYI
MSMEG_5122|M.smegmatis_MC2_155 ---------------MTYVIAEPCVDVKDKACIEECPVDCIYEGARMLYI
TH_1830|M.thermoresistible__bu ---------------VTYVIAEPCVDVKDKACIEECPVDCIYEGARMLYI
MAB_1327|M.abscessus_ATCC_1997 MYWTGNSPENIEETFVTYTIAEPCVDVMDKACIEECPVDCIYEGGRMLYI
:**.*******: ****************.*****
Mb1210|M.bovis_AF2122/97 HPDECVDCGACEPVCPVEAIFYEDDVPEQWSHYTQINADFFAELGSPGGA
Rv1177|M.tuberculosis_H37Rv HPDECVDCGACEPVCPVEAIFYEDDVPEQWSHYTQINADFFAELGSPGGA
MLBr_01489|M.leprae_Br4923 HPDECVDCGACEPVCPVEAIYYEDDVPEQWSHYTQINVDFFVELGSPGGA
MMAR_4274|M.marinum_M HPDECVDCGACEPVCPVEAIYYEDDVPEQWSQYTQINADFFAELGSPGGA
MUL_1025|M.ulcerans_Agy99 HPDECVDCGACEPVCPVEAIYYEDDVPEQWSQYTQINADFFAKLGSPGGA
MAV_1316|M.avium_104 HPDECVDCGACEPVCPVEAIYYEDDVPDQWSQYTQINADFFAELGSPGGA
Mvan_4529|M.vanbaalenii_PYR-1 HPDECVDCGACEPVCPVEAIYYEDDVPDQWSAYTQINADFFVELGSPGGA
Mflv_2170|M.gilvum_PYR-GCK HPDECVDCGACEPVCPVEAIYYEDDVPEQWSAYTQINADFFTELGSPGGA
MSMEG_5122|M.smegmatis_MC2_155 HPDECVDCGACEPVCPVEAIYYEDDVPDQWSSYAQANADFFAELGSPGGA
TH_1830|M.thermoresistible__bu HPDECVDCGACEPVCPVEAIYYEDDVPDQWAGYTQINADFFEELGSPGGA
MAB_1327|M.abscessus_ATCC_1997 HPDECVDCGACEPVCPVEAIFYEDDVPDQWTGYIQSNADFFVDLGSPGGA
********************:******:**: * * *.*** .*******
Mb1210|M.bovis_AF2122/97 AKVGMTENDPQAVKDLAPQSEDA
Rv1177|M.tuberculosis_H37Rv AKVGMTENDPQAVKDLAPQSEDA
MLBr_01489|M.leprae_Br4923 AKVGMAENDPQVIKNLAPQGEGD
MMAR_4274|M.marinum_M AKVGMTENDPQVVKDLPPQGEED
MUL_1025|M.ulcerans_Agy99 AKVGMTENDPQVVKDLPPQGEED
MAV_1316|M.avium_104 AKVGLTENDPQVVKDLPPQGEGD
Mvan_4529|M.vanbaalenii_PYR-1 SKVGQTDNDPQAVKDLPPQGED-
Mflv_2170|M.gilvum_PYR-GCK SKVGQTDNDPQAVKDLPPQGED-
MSMEG_5122|M.smegmatis_MC2_155 SKVGQTDNDPQAIKDLPPQGED-
TH_1830|M.thermoresistible__bu SKVGLTENDPQAVKDLPPQGED-
MAB_1327|M.abscessus_ATCC_1997 AKVGKTDYDPPSVKELPPMGEGH
:*** :: ** :*:*.* .*