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SQPVRKLHFVTVTALDDSSAEDAFLADAQRYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSFKGFQGK SSVRTWLYRIATNTCLTALDGNKRRALPSGLGQPASDPAGELFVRPEVTWLEPLPDAPREDPSDPSVIAE SRESVRLAFIAALQHLPPRQRAVLVLREVLQWKAAEVGEAVGTSTAAVNSLLQRARAQLDEISPSRDDEP VPPESPEAAELLDKYIAAFEDYDMDRLVELFTDDAVWEMPPFDGWYQGPANIVTLSKVQCPAEKAGDMRF LRTTANGQPVAALYMRNPETGVHEAFQLHVLDAGKAGITHVVAFKENDLFARFGLPDTL*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0149 | - | - | 100% (340) | RNA polymerase factor sigma-70 |
| M. vanbaalenii PYR-1 | Mvan_4806 | - | 7e-18 | 32.74% (223) | ECF subfamily RNA polymerase sigma-24 factor |
| M. vanbaalenii PYR-1 | Mvan_4999 | - | 8e-16 | 31.44% (229) | ECF subfamily RNA polymerase sigma-24 factor |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0188c | sigG | 1e-123 | 64.16% (346) | RNA polymerase factor sigma-70 |
| M. gilvum PYR-GCK | Mflv_0519 | - | 1e-161 | 80.88% (340) | RNA polymerase factor sigma-70 |
| M. tuberculosis H37Rv | Rv0182c | sigG | 1e-123 | 64.16% (346) | RNA polymerase factor sigma-70 |
| M. leprae Br4923 | MLBr_01076 | sigE | 1e-14 | 30.26% (195) | RNA polymerase sigma factor SigE |
| M. abscessus ATCC 19977 | MAB_4553 | - | 1e-117 | 63.95% (319) | RNA polymerase factor sigma-70 |
| M. marinum M | MMAR_0426 | sigG | 1e-120 | 64.76% (332) | alternative RNA polymerase sigma factor SigG |
| M. avium 104 | MAV_4998 | - | 1e-122 | 68.99% (316) | RNA polymerase factor sigma-70 |
| M. smegmatis MC2 155 | MSMEG_0219 | - | 1e-139 | 71.35% (342) | RNA polymerase factor sigma-70 |
| M. thermoresistible (build 8) | TH_0604 | sigG | 1e-141 | 72.35% (340) | PROBABLE ALTERNATIVE RNA POLYMERASE SIGMA FACTOR SIGG (RNA |
| M. ulcerans Agy99 | MUL_1076 | sigG | 1e-119 | 63.86% (332) | RNA polymerase factor sigma-70 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0188c|M.bovis_AF2122/97 MRTSPMPAKFRSVRVVVITGSVTAAPVRVSETLRRLIDVSVLAENSGREP
Rv0182c|M.tuberculosis_H37Rv MRTSPMPAKFRSVRVVVITGSVTAAPVRVSETLRRLIDVSVLAENSGREP
MMAR_0426|M.marinum_M -----------------------MSALAGNSTQNSIANFTAPTAERERPA
MUL_1076|M.ulcerans_Agy99 -------------MSATLRRLIDVSALAGNSTQNSIANFTAPTAERERPA
MAV_4998|M.avium_104 ------------------------------------------------MV
MAB_4553|M.abscessus_ATCC_1997 --------------------------------------------MTAHAI
Mvan_0149|M.vanbaalenii_PYR-1 ----------------------------MSQPVRKLHFVTVTA--LDDSS
Mflv_0519|M.gilvum_PYR-GCK ----------------------------MSHPMRKLLFVTVLA--LDEGG
MSMEG_0219|M.smegmatis_MC2_155 ----------------------------MSVILRKLTTVTVLAHKLDDDS
TH_0604|M.thermoresistible__bu ----------------------------MSVMLRTLLHVTVLTAPPDGGS
MLBr_01076|M.leprae_Br4923 ---------------------------------------------MGDGI
Mb0188c|M.bovis_AF2122/97 ADERRGDFSAHTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYEG
Rv0182c|M.tuberculosis_H37Rv ADERRGDFSAHTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYEG
MMAR_0426|M.marinum_M GD----EFAVHAEPYRRELLAHCYRMTGSVHDAEDLVQETLLRAWKSYHR
MUL_1076|M.ulcerans_Agy99 GD----EFAVHAEPYRRELLAHCYRMTGSVHDAEDLVQETLLRAWKSYHR
MAV_4998|M.avium_104 GA----DFTAHAEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYDR
MAB_4553|M.abscessus_ATCC_1997 ED----EFLSHTEQYRREILAHCYRMTGSIHDAEDLVQETYLRGWKAYAR
Mvan_0149|M.vanbaalenii_PYR-1 AE---DAFLADAQRYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSFKG
Mflv_0519|M.gilvum_PYR-GCK AK---DAFLADAQKYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSYDR
MSMEG_0219|M.smegmatis_MC2_155 PA---DAFLAEAQTYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSYQG
TH_0604|M.thermoresistible__bu -----DAFLADAEQYRRELLAHCYRMTGSLHDAEDLVQETFLRAWKSHHK
MLBr_01076|M.leprae_Br4923 GMEREGRWTGNTQCPLRVVPGDESPTLDGRASPEDLIITNLLSPTIMSHP
: .:: * : .. .. ..***: . *
Mb0188c|M.bovis_AF2122/97 FAGKSSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERR
Rv0182c|M.tuberculosis_H37Rv FAGKSSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERR
MMAR_0426|M.marinum_M FEGKSSLRTWLHRIATNTCLSALEGRQRRPLPTGLAASGSDPTAPLVERA
MUL_1076|M.ulcerans_Agy99 FEGKSSLRTWLHRIATNTCMSALEGRQRRPLPTGLAASGSDPTAPLVERA
MAV_4998|M.avium_104 FEGKSSVRTWLHRIATNTCLSALEGRQRRPLPVGLGAPSADPTAELVERR
MAB_4553|M.abscessus_ATCC_1997 FEGKSSVRTWLYRIATNTCLTALEGKQRRPLPTGLGAPSADPLDELDERS
Mvan_0149|M.vanbaalenii_PYR-1 FQGKSSVRTWLYRIATNTCLTALDGNKRRALPSGLGQPASDPAGELFVRP
Mflv_0519|M.gilvum_PYR-GCK FEGKSSVRTWLYRIATNTCLTALDGRKRRPLPSGLGGPSADPYADLTERH
MSMEG_0219|M.smegmatis_MC2_155 FQGRSSVRTWLYRIATNTCLTSLEGRSRRPLPSGLGTPSSAPTDQITEHH
TH_0604|M.thermoresistible__bu FEGKASVRTWLYKIATNACLTALDGRQRRPLPTGLGAPSSDPTDDIVARE
MLBr_01076|M.leprae_Br4923 PPSRD-----------DDWVEPFDALQGTAVFDATGDKATMPSWEELVRQ
.: : : .::. .: . . .: * :
Mb0188c|M.bovis_AF2122/97 EVSWLEPLPDV-TDDPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLL
Rv0182c|M.tuberculosis_H37Rv EVSWLEPLPDV-TDDPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLL
MMAR_0426|M.marinum_M EVPWLEPLPDL-MADPADPSVIVGSRESVRLAFVAALQHLSPRQRAVLLL
MUL_1076|M.ulcerans_Agy99 EVPWLEPLPDL-MADPADPSVIVGSRESVRLAFVAALQHLSPRQRAVLLL
MAV_4998|M.avium_104 EVPWLEPLPAL-SDDPADPSVIVGSRESVRLAFVAALQYLSPRQRAVLLL
MAB_4553|M.abscessus_ATCC_1997 EIPWLEPLP----DDATDPASIVGARESVRLAFVAALQHLPAKQRAVLVL
Mvan_0149|M.vanbaalenii_PYR-1 EVTWLEPLPDAPREDPSDPSVIAESRESVRLAFIAALQHLPPRQRAVLVL
Mflv_0519|M.gilvum_PYR-GCK EIAWLEPIPDDPHEDPADPSVIAESRESVRLALIAALQHLSPRQRAVLVL
MSMEG_0219|M.smegmatis_MC2_155 EVPWLEPLPDG--DDPADPSQIVGTRESVRLAFVAALQHLSPRQRAVLVM
TH_0604|M.thermoresistible__bu EVPWLEPLP----DDAADPSTIVGSRESVRLAFVAALQHLPPRQRAVLLL
MLBr_01076|M.leprae_Br4923 HAARVYWLAYRLSGNQHDAEDLT-------------------QETFIRVF
. . : :. : *. :. :: : ::
Mb0188c|M.bovis_AF2122/97 RDVLQWKSAEVADAIGTSTVAVNSLLQRARSQLQTVRPSAADRLSAPDSP
Rv0182c|M.tuberculosis_H37Rv RDVLQWKSAEVADAIGTSTVAVNSLLQRARSQLQTVRPSAADRLSAPDSP
MMAR_0426|M.marinum_M RDVLQWKAAEVAEAIGTTTVAVNSLLQRARAQLETAQPSADDGLVAPDSP
MUL_1076|M.ulcerans_Agy99 RDVLQWKAAEVAQAIGTTTVAVNSLLQRARAQLETVQPSADDGLVAPDSP
MAV_4998|M.avium_104 RDVLGWRAAEVAEAIGTTTAAVNSLLQRARAQLDAVGPSADDQPAQPDSA
MAB_4553|M.abscessus_ATCC_1997 REVLQWKAQEVAEAIGSTTAAVNSLLQRARAQLHEVSP-HEETLLEPEDP
Mvan_0149|M.vanbaalenii_PYR-1 REVLQWKAAEVGEAVGTSTAAVNSLLQRARAQLDEISPSRDDEPVPPESP
Mflv_0519|M.gilvum_PYR-GCK REVLQWKAAEVGEVIGASTAAVNSLLQRARAQLDEVAPSRDDQPVSPESP
MSMEG_0219|M.smegmatis_MC2_155 REVLQWKASEVGEAIGASTAAVNSLLQRARAQLEAVGPNEDDKIEAPDSP
TH_0604|M.thermoresistible__bu REVLQWRAAEVAEVLNTSTAAVNSLLQRARAQLDQVGPSEDDELVPPESP
MLBr_01076|M.leprae_Br4923 RSVQNYQPGTFEGWLHRITTNLFLDMVRRRARIRMDALPDDYDRVPADEP
*.* ::. . : *. : : * *::: .:..
Mb0188c|M.bovis_AF2122/97 EAQDLLARYIAAFEAYDIDRLVELFTAEAIWEMPPYTGWYQGAQAIVTLI
Rv0182c|M.tuberculosis_H37Rv EAQDLLARYIAAFEAYDIDRLVELFTAEAIWEMPPYTGWYQGAQAIVTLI
MMAR_0426|M.marinum_M EAQDLLTRYITAFEAYDIDRLVEIFTAEAIWEMPPYAGWYQGARDIITLI
MUL_1076|M.ulcerans_Agy99 EAQDLLTRYIAAFEAHDIDRLVEIFTAEAIWEMPPYAGWYQGARDIITLI
MAV_4998|M.avium_104 ETQDLLARYIAAFESYDIDRLVELFTAEAIWEMPPYTGWYQGARTIVTLI
MAB_4553|M.abscessus_ATCC_1997 MLREQLRQYINAFERYDVEAIAKMFTTEAIWEMPPFTGWYQGGPSIAALI
Mvan_0149|M.vanbaalenii_PYR-1 EAAELLDKYIAAFEDYDMDRLVELFTDDAVWEMPPFDGWYQGPANIVTLS
Mflv_0519|M.gilvum_PYR-GCK QAAEALAKYIAAFEDYDMDRLVELFTADAVWEMPPFDGWYSGPADIIALS
MSMEG_0219|M.smegmatis_MC2_155 QAQATLDRYIAAFEAYDIDKLVELFTEEAIWEMPPFDSWYQGPQAIGDLS
TH_0604|M.thermoresistible__bu EAQELLTRYIDAFESYDIDKLVELFTADAVWEMPPFDGWYQGPQNIVTLS
MLBr_01076|M.leprae_Br4923 NPEQIYH-----------DSRLGPDLQAALDSLPPEFRAAVVLCDIEGLS
: *: .:** * *
Mb0188c|M.bovis_AF2122/97 HQQCPAYSPGDMRLISLIAN-GQPAAAMYMRAGD--VHLPFQLHVLDMAA
Rv0182c|M.tuberculosis_H37Rv HQQCPAYSPGDMRLISLIAN-GQPAAAMYMRAGD--VHLPFQLHVLDMAA
MMAR_0426|M.marinum_M HQQCPAECPGDMRLIPLVAN-GQPAAAMYMRAGE--THVPFQLHVLDMVD
MUL_1076|M.ulcerans_Agy99 HQQCPAECPGDMRLIPLVAN-GQPAAAMYMRAGE--TRVPFLLHVLDMVE
MAV_4998|M.avium_104 HQQCPAEGAGDMRLLPLIAN-GQPAAAMYMRAGD--VHLPFQLHVLDVRG
MAB_4553|M.abscessus_ATCC_1997 KEQCPAEHAGDMRLVETSAN-GQPAIGLYMREGDG-VHRPFQMHVLDVTQ
Mvan_0149|M.vanbaalenii_PYR-1 KVQCPAEKAGDMRFLRTTAN-GQPVAALYMRNPETGVHEAFQLHVLDAGK
Mflv_0519|M.gilvum_PYR-GCK KYHCPAAGAGDMRFLRTTAN-GQPVAALYMRNPETNVHEAFQLHVLDLRT
MSMEG_0219|M.smegmatis_MC2_155 RYKCPAEEPGDMRFLQTTAN-GQPAAAMYMLNRETGRHEAFQLHVLDITA
TH_0604|M.thermoresistible__bu KTHCPAERPGDMRLIPTTAN-GQPAGAMYLRNPETGTHEAFQMHVLAIGP
MLBr_01076|M.leprae_Br4923 YEEIGATLGVKLGTVRSRIHRGRQALRDYL----------LTAHPRDGAT
. * .: : : *: . *: : *
Mb0188c|M.bovis_AF2122/97 DRVSHVVAFLDTTLFPKFGLPDSL---------
Rv0182c|M.tuberculosis_H37Rv DRVSHVVAFLDTTLFPKFGLPDSL---------
MMAR_0426|M.marinum_M GRVSHVTAFLDGSLFPKFGLPASI---------
MUL_1076|M.ulcerans_Agy99 GRVSHVTAFLDGSLFPKFGLPASI---------
MAV_4998|M.avium_104 DRVSHVVAFLDDSLFAKFGLPAALGPRQEGVRA
MAB_4553|M.abscessus_ATCC_1997 DGVAHVVCFFDISLFEKFGLPAELTD-------
Mvan_0149|M.vanbaalenii_PYR-1 AGITHVVAFKENDLFARFGLPDTL---------
Mflv_0519|M.gilvum_PYR-GCK RGIAHVVAFMDVSLFRKFGLPETL---------
MSMEG_0219|M.smegmatis_MC2_155 DGISHVVAFMGEGLFKKFGLPETL---------
TH_0604|M.thermoresistible__bu GGISHVVAFHMP-SFAPFGLPDSL---------
MLBr_01076|M.leprae_Br4923 TDATHVKSA------------------------
:** .