For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTNAEPVDQSTGAPDPGMVRAGAAAAARRRELDISQRSLAAEGIINAGALIAFEKGRSWPRERTRARLEE ILQWPPGTIARLRRGEPLRAAPPPPESRAPASNDEVSLIAQAVTTAVSAFGSTVAALPPVDDAAFVPRVT AILADLRQLDAVASRAARIGRVTPALIKALSAVRGLYDDLMVRAARAPHATLGQRLYAARRGANLTVLET AQAAGVSEDAVQQAEADEPLSPADIAAIETLISQIG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0068 | - | - | 100% (246) | hypothetical protein Mvan_0068 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3893 | - | 2e-77 | 65.57% (244) | hypothetical protein Mb3893 |
| M. gilvum PYR-GCK | Mflv_0777 | - | 1e-109 | 82.45% (245) | hypothetical protein Mflv_0777 |
| M. tuberculosis H37Rv | Rv3863 | - | 2e-77 | 65.57% (244) | hypothetical protein Rv3863 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1298c | - | 1e-26 | 44.37% (142) | hypothetical protein MAB_1298c |
| M. marinum M | MMAR_5438 | - | 1e-76 | 63.37% (243) | putative regulatory protein |
| M. avium 104 | MAV_0041 | - | 6e-05 | 23.79% (248) | helix-turn-helix domain-containing protein |
| M. smegmatis MC2 155 | MSMEG_0052 | - | 1e-84 | 67.57% (259) | hypothetical protein MSMEG_0052 |
| M. thermoresistible (build 8) | TH_2085 | - | 5e-79 | 60.15% (266) | HYPOTHETICAL ALANINE RICH PROTEIN |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3893|M.bovis_AF2122/97 --MAGERKVCPPSRLVPANKGSTQMSKAGSTVGPAPLVACSGGTSDVIEP
Rv3863|M.tuberculosis_H37Rv --MAGERKVCPPSRLVPANKGSTQMSKAGSTVGPAPLVACSGGTSDVIEP
MMAR_5438|M.marinum_M MLVSGTRALPPAS--VAASEESTYMPDAESTARPALRVARGGDSPGLVTP
Mvan_0068|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_0777|M.gilvum_PYR-GCK --------------------------------------------------
MSMEG_0052|M.smegmatis_MC2_155 --------------------------------------------------
TH_2085|M.thermoresistible__bu --------------------------------------------------
MAB_1298c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_0041|M.avium_104 --------------------------------------------------
Mb3893|M.bovis_AF2122/97 RRGVAIIGHSCRVGTQIDDSRISQTHLRAVSDDGRWRIVGNIPRGMFVGG
Rv3863|M.tuberculosis_H37Rv RRGVAIIGHSCRVGTQIDDSRISQTHLRAVSDDGRWRIVGNIPRGMFVGG
MMAR_5438|M.marinum_M --GHRPVGRGALTNARLDDPVLSQTHVRAVSDGGQRRIVTNSPNGMFVDG
Mvan_0068|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_0777|M.gilvum_PYR-GCK --------------------------------------------------
MSMEG_0052|M.smegmatis_MC2_155 --------------------------------------------------
TH_2085|M.thermoresistible__bu --------------------------------------------------
MAB_1298c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_0041|M.avium_104 --------------------------------------------------
Mb3893|M.bovis_AF2122/97 RRGSSVTVSDKTLIRFGDPPGGKALTFEVVRPSDSAAQHGRVQPSADLSD
Rv3863|M.tuberculosis_H37Rv RRGSSVTVSDKTLIRFGDPPGGKALTFEVVRPSDSAAQHGRVQPSADLSD
MMAR_5438|M.marinum_M TRKSSVAVSDKTIVRFGDPTGGKALTFEVVRPSNSPEEDSREQRPAEQSD
Mvan_0068|M.vanbaalenii_PYR-1 ------------------------------------------MTNAEPVD
Mflv_0777|M.gilvum_PYR-GCK ------------------------------------------MTNAEPID
MSMEG_0052|M.smegmatis_MC2_155 ------------------------------------------MTDAE-FD
TH_2085|M.thermoresistible__bu ------------------------------------------MTDVDLTA
MAB_1298c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_0041|M.avium_104 --------------------------------------------------
Mb3893|M.bovis_AF2122/97 DPAHNAAPVAPDPGVVRAGAAAAARRRELDISQRSLAADGIINAGALIAF
Rv3863|M.tuberculosis_H37Rv DPAHNAAPVAPDPGVVRAGAAAAARRRELDISQRSLAADGIINAGALIAF
MMAR_5438|M.marinum_M SQTN-----EADPGVVRAGAAAAARRRELDISQRSLAADGIINAGALIAF
Mvan_0068|M.vanbaalenii_PYR-1 QSTG-----APDPGMVRAGAAAAARRRELDISQRSLAAEGIINAGALIAF
Mflv_0777|M.gilvum_PYR-GCK ESIG-----APDPGMARAGAAAAARRRELNISQRSLAAGGIINAGALIAF
MSMEG_0052|M.smegmatis_MC2_155 LATG-----EFDVGLVRAGAAAAARRRELDISQRSLAADGIINAGALIAF
TH_2085|M.thermoresistible__bu SPVS-----EVDPGLARAGAAAAARRRELNISQRRLAAEGIINAGALIAF
MAB_1298c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_0041|M.avium_104 ------------MSRESAGAAIRALRESRDWSLADLAAATGVSIMGLSYL
Mb3893|M.bovis_AF2122/97 EKGRSWPRERTRAKLEEVLQWPAGTIARIRRG-------EPTEPATNPDA
Rv3863|M.tuberculosis_H37Rv EKGRSWPRERTRAKLEEVLQWPAGTIARIRRG-------EPTEPATNPDA
MMAR_5438|M.marinum_M EKGRSWPRERTRAKLEEVLQWPAGTIARIRQG-------ESVAPEPAPEA
Mvan_0068|M.vanbaalenii_PYR-1 EKGRSWPRERTRARLEEILQWPPGTIARLRRG-------EPLRAAPP-PP
Mflv_0777|M.gilvum_PYR-GCK EKGRSWPRERTRARLEEILQWPPGTIAALRRG-------EPVHPAP--TP
MSMEG_0052|M.smegmatis_MC2_155 EKGRSWPRERTRLKLEEVLRWPPGTIARLRQGGSVPTTSAPVAPPPPPEP
TH_2085|M.thermoresistible__bu EKGRSWPRERTRAKLEQVLRWPPGTIARLRAGEDVGPAGGPATGAQEPSA
MAB_1298c|M.abscessus_ATCC_199 --------------MPEVVP------------------------------
MAV_0041|M.avium_104 ERGARKPHKSTVQKIENGLGLPPGTYSRLLVAADPEAELARLMAAQPVAE
: : :
Mb3893|M.bovis_AF2122/97 SPGLRP-------------ADGPASLIAQAVTAAVDGCSLAIAALPATED
Rv3863|M.tuberculosis_H37Rv SPGLRP-------------ADGPASLIAQAVTAAVDGCSLAIAALPATED
MMAR_5438|M.marinum_M SVEAPT-------------SDGPASLIAQAVAAAVDTCSLAIAALPAPEE
Mvan_0068|M.vanbaalenii_PYR-1 ESRAPA-------------SNDEVSLIAQAVTTAVSAFGSTVAALPPVDD
Mflv_0777|M.gilvum_PYR-GCK EARPPA-------------SGDEVSLIAQAVITAVHAFGSTISSLPPADD
MSMEG_0052|M.smegmatis_MC2_155 PAAAPAPVTS-------VPAADEVPLIAQAVLTAVHTLETTINAMPPESD
TH_2085|M.thermoresistible__bu TRTDQADYRPNAPGSDHGGSDDEVPLVAQAVLAAVNTLDDASEALPDVDH
MAB_1298c|M.abscessus_ATCC_199 -------------------DDGEAPVIVSLVDAAVHMYSSAIDTLPDPSD
MAV_0041|M.avium_104 MPARRTG-------PVVVDRHSDTEVLEGYAEAQLDALKSVIDRLPATTS
. . :: . : : . :*
Mb3893|M.bovis_AF2122/97 PEFTERAAPILADLRQLEAIAVQATRISR-ITPELIKALGAVRRHHDELM
Rv3863|M.tuberculosis_H37Rv PEFTERAAPILADLRQLEAIAVQATRISR-ITPELIKALGAVRRHHDELM
MMAR_5438|M.marinum_M PDFTERAAPILADLRQLEGIAVQATRISR-ITPELIKALGAVRRYHDKLM
Mvan_0068|M.vanbaalenii_PYR-1 AAFVPRVTAILADLRQLDAVASRAARIGR-VTPALIKALSAVRGLYDDLM
Mflv_0777|M.gilvum_PYR-GCK AAFIPRVTAILADLRQLEAVAARAARIGR-VTPALIKALSTVRGLYDDLM
MSMEG_0052|M.smegmatis_MC2_155 PDFVPRVTAILGDLRQLEAVASRAARISM-VTPPLIKALSAVRRQIDELT
TH_2085|M.thermoresistible__bu PEFTPRLTKILADLRQLEAVAARAARISR-VSPRVIKALSAVRRSIDELT
MAB_1298c|M.abscessus_ATCC_199 PEYGERVAVVLSGLRKLESAISKAAGRSR-VTPSVIVALSGVRHRYDDLM
MAV_0041|M.avium_104 NEYETYILSVIAQCVKAELLAASSWRVAVNAGADSTGRLMEHLQALEATR
: ::. : : : . . * :
Mb3893|M.bovis_AF2122/97 RLGATAPGATLAQRLYAARRRANLSTLETAQAAGVAEEMIVGAEAEEELP
Rv3863|M.tuberculosis_H37Rv RLGATAPGATLAQRLYAARRRANLSTLETAQAAGVAEEMIVGAEAEEELP
MMAR_5438|M.marinum_M TLSATAPGATLAQRLYAARRRANLSTSETAQAAGVTEELIVRAEAEEALH
Mvan_0068|M.vanbaalenii_PYR-1 VRAARAPHATLGQRLYAARRGANLTVLETAQAAGVSEDAVQQAEADEPLS
Mflv_0777|M.gilvum_PYR-GCK LRAAGAPQAGLGHRLYAARRGANLTVLETAQAAGVSERAIEQAEAGEPVT
MSMEG_0052|M.smegmatis_MC2_155 MRAANAPGATLGQRLYAARRQANLTVAETAQAAGVSEDAIARTEAEYPVD
TH_2085|M.thermoresistible__bu LRGARAPQATLGQRLYAARRGANLTIEETAQAAGVPAEVIIAAEADEPVA
MAB_1298c|M.abscessus_ATCC_199 KAAANSPSATLGQRLYTARRRARLTAQETANGAGLKVGFLTAIESEEPVT
MAV_0041|M.avium_104 VALLKRMPTSLSARFDRACAQSSLPETIIAALVGVDVDEMWDIRNRGVIS
: *. *: * : *. * .*: : . :
Mb3893|M.bovis_AF2122/97 AEATEAIEALIRQIN----------------
Rv3863|M.tuberculosis_H37Rv AEATEAIEALIRQIN----------------
MMAR_5438|M.marinum_M AEAAEAIEALIRQIN----------------
Mvan_0068|M.vanbaalenii_PYR-1 PADIAAIETLISQIG----------------
Mflv_0777|M.gilvum_PYR-GCK ASEADAIETLVGQIA----------------
MSMEG_0052|M.smegmatis_MC2_155 AAAVHAIEALIDSLR----------------
TH_2085|M.thermoresistible__bu ATAAGAIETLIAELDQP--------------
MAB_1298c|M.abscessus_ATCC_199 EDEAAKIKDLIAALGG---------------
MAV_0041|M.avium_104 PSALPRVRAFTDAVESASRDEASQGDDEEGS
:. : :