For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVRSSAVLVGVDGSATGAAAAAWAVKEAASRDLPLRLVHAVTATGDGRVDAQDLARAGRIVHNAVTAVEA LGAPVRIESQIICGATAPALSAASHDAAMLCLGFTNGASGRHRARRSTAAEIASSARCPVAIIHPAANHS PGARWVVAEAGASPSDDATSTRAVDEALLRGAPLRIVAAWPSRYPDMYDDHAVARKNRLVKARWERWLAP RRRQHPDLDAHVTAAPGSILNYLARHRKGIRLAVLSHERADDVAELLAPCVDCEFDILICDAPPGRRHDR TSSSEQSG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4995 | - | - | 100% (288) | UspA domain-containing protein |
M. gilvum PYR-GCK | Mflv_3846 | - | 1e-38 | 35.87% (276) | UspA domain-containing protein |
M. gilvum PYR-GCK | Mflv_4991 | - | 1e-27 | 29.64% (253) | UspA domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2053c | - | 4e-34 | 36.58% (257) | hypothetical protein Mb2053c |
M. tuberculosis H37Rv | Rv2028c | - | 4e-34 | 36.58% (257) | hypothetical protein Rv2028c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3904 | - | 7e-34 | 37.98% (258) | hypothetical protein MAB_3904 |
M. marinum M | MMAR_2076 | - | 3e-31 | 32.55% (255) | hypothetical protein MMAR_2076 |
M. avium 104 | MAV_4010 | - | 2e-23 | 35.32% (252) | hypothetical protein MAV_4010 |
M. smegmatis MC2 155 | MSMEG_5245 | - | 3e-37 | 35.25% (278) | universal stress protein family protein |
M. thermoresistible (build 8) | TH_2494 | - | 4e-17 | 27.41% (270) | PUTATIVE putative conserved hypothetical membrane protein |
M. ulcerans Agy99 | MUL_2424 | - | 2e-27 | 33.72% (258) | hypothetical protein MUL_2424 |
M. vanbaalenii PYR-1 | Mvan_1382 | - | 2e-79 | 57.66% (274) | UspA domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4995|M.gilvum_PYR-GCK MVRSS----AVLVGVDGSATGAAAAAWAVKEAASRDLPLRLVHAVTAT-- Mvan_1382|M.vanbaalenii_PYR-1 MQTSP----AVVVGIDGSRFATAAAIWAIDEAASRDIPLRLVHAVTPT-- Mb2053c|M.bovis_AF2122/97 MNQSHKP-PSIVVGIDGSKPAVQAALWAVDEAASRDIPLRLLYAIEPD-- Rv2028c|M.tuberculosis_H37Rv MNQSHKP-PSIVVGIDGSKPAVQAALWAVDEAASRDIPLRLLYAIEPD-- MSMEG_5245|M.smegmatis_MC2_155 MSIAR----PVIVGIDGSQPAVDAAIWAVKEALSRGVPLRLIYAVHPD-- MAB_3904|M.abscessus_ATCC_1997 MNEIRTPGPAVLVGIDGSRSAVRAALWAVDEALHRELPLRLVHVTPQT-- MAV_4010|M.avium_104 -MSTAYPAPAIVVGVDGSRAAMHAAVWAIDEAVGRDIPLRLVYVIDPH-- MUL_2424|M.ulcerans_Agy99 -MSN-QAAPAIVVGIDGSRASTHAAVWAVDEAVSRDIPVRLVYIIDPA-- MMAR_2076|M.marinum_M -------MKPVIVGIDGSPAGITAVLWATAEAVSAGVPLRLISVLKTA-- TH_2494|M.thermoresistible__bu -VSSTAAYEGIVVGVDGSAASADAVRWAARSAALRNLQLTLVHVMTATSI ::**:*** . *. ** .* : : *: Mflv_4995|M.gilvum_PYR-GCK -------------GDGRVDAQDLAR----AGRIVHNAVTAVEALG----- Mvan_1382|M.vanbaalenii_PYR-1 -------------DGAHLDADDLAR----AGRVVQSAVAAVEANG----- Mb2053c|M.bovis_AF2122/97 -------------DPGYAAHGAAARKLAAAENAVRYAFTAVEAAD----- Rv2028c|M.tuberculosis_H37Rv -------------DPGYAAHGAAARKLAAAENAVRYAFTAVEAAD----- MSMEG_5245|M.smegmatis_MC2_155 -------------DNG-ADHENSARALATAEVAIRQACVAVESTE----- MAB_3904|M.abscessus_ATCC_1997 -------------EFPEFSDERSP-----AGTAVRHAFRQIGATH----- MAV_4010|M.avium_104 -------------GAPGGHGPDTRL--AAARAALADAHRAVDAFA----- MUL_2424|M.ulcerans_Agy99 -------------QAPAGD-RDGRQ--SSARAALFDVQRAVEATG----- MMAR_2076|M.marinum_M -------------HSSPEEYEHDLAH---AETSLRAAQSAIEATA----- TH_2494|M.thermoresistible__bu GAPLVWPAGPIPDSLIQWQEDEARQILADSAEIAENAFQEARAAGPGPAG : . : Mflv_4995|M.gilvum_PYR-GCK -APVRIESQIICGATAPALSAASHDAAMLCLGFTNGASGRHRARRSTAAE Mvan_1382|M.vanbaalenii_PYR-1 -KPVKVETQITPGRAAHVLRSQSRDAALLCVGSSGLTHGGSGPVDRTAAA Mb2053c|M.bovis_AF2122/97 -RPVKVEVEITQERPVTSLIRASAAAALVCVGAIGVHHFRPERVGSTAAA Rv2028c|M.tuberculosis_H37Rv -RPVKVEVEITQERPVTSLIRASAAAALVCVGAIGVHHFRPERVGSTAAA MSMEG_5245|M.smegmatis_MC2_155 -QPVQIELEVVQDKPIEALIAASQNTPLLCVGASGLTQAGRGGIGSVASA MAB_3904|M.abscessus_ATCC_1997 -KPVKVEAEIRHGRVADVLLDASRSAVMLCVGAIGISGADTRKVGSTAAE MAV_4010|M.avium_104 -QPVKVETEILWGNTAFKLLEQSRSAVMLCVGQIGLNHACHG-GPAIATS MUL_2424|M.ulcerans_Agy99 -QPVKIETEILWGRPLTKLLEESRTAVMVCVGSIGLNHARRG-EGSVAGT MMAR_2076|M.marinum_M -APVKVETDTPRGPAGAVLVEASRDAELVCVGSVGIGRYARAILGSTATE TH_2494|M.thermoresistible__bu DDAVRVVTGVVRAAPVPTLVDASKQAKLVAVGSRGQGPLRRVLLGSVSSG .*:: * * : ::.:* . : Mflv_4995|M.gilvum_PYR-GCK IASSARCPVAIIHP-AAN-HSPGARWVVAEAGASPSDDATSTRAVDEALL Mvan_1382|M.vanbaalenii_PYR-1 VALTASCPVAIIHS-AGT-NSK-PGWVVVEVNDSPAGELVLRTGVEEALL Mb2053c|M.bovis_AF2122/97 LALSAQCPVAIVRP-HRVPIGRDAAWIVVEADGSSDIGVLLGAVMAEARL Rv2028c|M.tuberculosis_H37Rv LALSAQCPVAIVRP-HRVPIGRDAAWIVVEADGSSDIGVLLGAVMAEARL MSMEG_5245|M.smegmatis_MC2_155 VLRSAQCPVAVVAT-PGK--GR---RILVEFDGRPSASTALQTGVDEARL MAB_3904|M.abscessus_ATCC_1997 VLRSVRCPVAVIRD-DPSS-LRGTSAVVVEIDESHESVTPLELAAHEARL MAV_4010|M.avium_104 LVRSALCPVAVVQQ-APS---LPAAARVSGVVAEVDNGTVLRHAFEEARL MUL_2424|M.ulcerans_Agy99 LAGSALCPVAVIQS-PAG---AAGAPKVGEVVAEVDNGSVLRHAFEEARL MMAR_2076|M.marinum_M LAEKAHCPVAVIRS-NSDQPPPDINWIVVRVTDAPDNDAVIEYAAHEARL TH_2494|M.thermoresistible__bu LVHHAHCPVAVIREGTPHTPDFAKRPVLVGIDGSESAQRATAVAFEEASF : . ****:: : ** : Mflv_4995|M.gilvum_PYR-GCK RGAPLRIVAAWPSRYPDMYDDHAVAR-KNRLVKARWERWLAPRRRQHPDL Mvan_1382|M.vanbaalenii_PYR-1 RGAALRVVATWPSRYPDIHDDGAVAN-KNRSVKAQWERRLAPWRLRHPEL Mb2053c|M.bovis_AF2122/97 RDSPVRVVTCRQS---------GVGDTGDDVRAS-LDRWLARWQPRYPDV Rv2028c|M.tuberculosis_H37Rv RDSPVRVVTCRQS---------GVGDTGDDVRAS-LDRWLARWQPRYPDV MSMEG_5245|M.smegmatis_MC2_155 RDAPLSVMTTWQHRHRE-LYEEKVAEERNRLAQSQLDRRMTRYRKRYPEL MAB_3904|M.abscessus_ATCC_1997 RAAPLRVLLRHRPISLSGQRVATLTRVDRRVAAVHVERRLAPLRVRYPDL MAV_4010|M.avium_104 RGVGLCAV-------------------GNPSARVELERRLARWMRLYPDV MUL_2424|M.ulcerans_Agy99 RNVPLRAISSRVATDHG-------SEDGNRLATAQLTRRLTRWTRLYPDV MMAR_2076|M.marinum_M RQAPILALGGRPE-------------ELTDAADGEFERRVQQWGQHHTDV TH_2494|M.thermoresistible__bu RGVDLIALHAWSDADIADIP-TLELSAVQQSAERVLSERLAGFRERYPDV * : : . : :.:: Mflv_4995|M.gilvum_PYR-GCK DAHVTAAPGSILNYLARHRKGIRLAVLSHERADDVAELLAP-----CVDC Mvan_1382|M.vanbaalenii_PYR-1 EVHAVATPGSILNYLARHRDPIGLAIVPHERAAGVAELLAPRGRDPLRDG Mb2053c|M.bovis_AF2122/97 RVQSAAVHGELLDYLAGLGRSVHMVVLSASDQEHVEQLVGAPGNAVLQEA Rv2028c|M.tuberculosis_H37Rv RVQSAAVHGELLDYLAGLGRSVHMVVLSASDQEHVEQLVGAPGNAVLQEA MSMEG_5245|M.smegmatis_MC2_155 DLELITDHGNTADYVAANPQTVQLIVVGAERFNRAGDVTDPAALGALVDA MAB_3904|M.abscessus_ATCC_1997 DIRALDPVGGTLDYLERHGHTVQLVVVGAGDAAHVQELVGPNGCGVLGRT MAV_4010|M.avium_104 QAESAVLTGGVEQHLRADHRAGRLLVTDAYRAEA------------LCHA MUL_2424|M.ulcerans_Agy99 RVESAIIAGHACRYMAANAKPDELYVTDSHAAQVCS----------VYGA MMAR_2076|M.marinum_M HVYPITTQAGIARFLADHDERVQLAVIGADEADQVARLVGPSGHPIFRHA TH_2494|M.thermoresistible__bu SVHRRIVGSEPARHLVEASEDAQLVVVGSRGRGGFTGMLLGSVSRAVVNA . .: : : Mflv_4995|M.gilvum_PYR-GCK EFDILICDAPPGRRHDRTSSSEQSG Mvan_1382|M.vanbaalenii_PYR-1 CFDVLICEP------DNAP------ Mb2053c|M.bovis_AF2122/97 GCTLLVVG-------QQYL------ Rv2028c|M.tuberculosis_H37Rv GCTLLVVG-------QQYL------ MSMEG_5245|M.smegmatis_MC2_155 GCSLLTCDR------QQRL------ MAB_3904|M.abscessus_ATCC_1997 HCSVLIAER------QRLL------ MAV_4010|M.avium_104 GHSVLAVRC------GNL------- MUL_2424|M.ulcerans_Agy99 GCSVLTVRS------GNL------- MMAR_2076|M.marinum_M ECSVLVVRG---------------- TH_2494|M.thermoresistible__bu VTTPVIVAR---------------- :