For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTEPEASHEIDIHTTAGKLADLRKRAEEALHPVGEAAVEKVHAKGKLTARERILALLDEGSFVELDALAK HRSKNFGLEKNRPTGDGVVTGYGTIDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN DGAGARIQEGVVSLGLYSKIFHNNIKASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFITGPD VIKTVTGEDVTMEELGGAHTHMAKSGTVHYVASGEQDALDYVRDLLSYLPPNNYAEPPRYPAPISGPIEE NLTDEDLELDTLIPDSPNQPYDMHEVITRILDDDEFLEVQAGYAGNIVVGFGRVDGRPVGIVANQPTQFA GCLDINASEKAARFIRTCDCYNIPIVLLVDVPGFLPGTDQEYNGIIRRGAKLLYAYGEATVAKVTVITRK SYGGAYCVMGSKDMGADVVVAWPTAQIAVMGASGAVGFVYRGQLKEAAANGEDVDALRLKLQQEYEDTLV NPYIAAERGYVDAVIPPSHTRGYVATALKLLERKVVQTPPKKHGNIPL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4774 | - | - | 100% (538) | carboxyl transferase |
M. gilvum PYR-GCK | Mflv_1170 | - | e-134 | 48.86% (526) | carboxyl transferase |
M. gilvum PYR-GCK | Mflv_2775 | - | 1e-98 | 42.86% (455) | propionyl-CoA carboxylase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3308 | accD5 | 0.0 | 88.08% (537) | propionyl-CoA carboxylase beta chain |
M. tuberculosis H37Rv | Rv3280 | accD5 | 0.0 | 88.27% (537) | propionyl-CoA carboxylase beta chain |
M. leprae Br4923 | MLBr_00731 | accD5 | 0.0 | 85.10% (537) | acetyl/propionyl CoA carboxylase beta subunit |
M. abscessus ATCC 19977 | MAB_3631 | - | 0.0 | 86.73% (535) | propionyl-CoA carboxylase beta chain 5 AccD5 |
M. marinum M | MMAR_1256 | accD5 | 0.0 | 88.83% (537) | propionyl-CoA carboxylase beta chain 5 AccD5 |
M. avium 104 | MAV_4250 | - | 0.0 | 89.20% (537) | propionyl-CoA carboxylase beta chain |
M. smegmatis MC2 155 | MSMEG_1813 | - | 0.0 | 93.69% (539) | propionyl-CoA carboxylase beta chain |
M. thermoresistible (build 8) | TH_4304 | - | 0.0 | 90.94% (530) | PUTATIVE propionyl-CoA carboxylase beta chain |
M. ulcerans Agy99 | MUL_2632 | accD5 | 0.0 | 88.27% (537) | propionyl-CoA carboxylase beta chain 5 AccD5 |
M. vanbaalenii PYR-1 | Mvan_1677 | - | 0.0 | 96.66% (539) | carboxyl transferase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4774|M.gilvum_PYR-GCK ---MTE-------PEASHEIDIHTTAGKLADLRKRAEEALHPVGEAAVEK Mvan_1677|M.vanbaalenii_PYR-1 MTSVTE-------PSAEHEIDIHTTAGKLADLRKRAAEAQHPVGETAVEK MSMEG_1813|M.smegmatis_MC2_155 MTSVTE-------PSAEHQVDIHTTAGKLADLKRRTEETLHPVGEAAVDK Mb3308|M.bovis_AF2122/97 MTSVTDRSAHSAERSTEHTIDIHTTAGKLAELHKRREESLHPVGEDAVEK Rv3280|M.tuberculosis_H37Rv MTSVTDRSAHSAERSTEHTIDIHTTAGKLAELHKRREESLHPVGEDAVEK MLBr_00731|M.leprae_Br4923 MTSVTDHSAHSMERAAEHTINIHTTAGKLAELHKRTEEALHPVGAAAFEK MMAR_1256|M.marinum_M MTSVTD---HTAEPAAEHTIDIHTTAGKLAELHKRRAESLHPVGEGAIEK MUL_2632|M.ulcerans_Agy99 MTSVTD---HTAEPAAEHTIDIHTTAGKLAELHKRRAESLHPVGEGAIEK MAV_4250|M.avium_104 MTSVTD---HTAEPAAEHSIDIHTTAGKLAELHKRREESLHPVGEEAVEK TH_4304|M.thermoresistible__bu ------------------VVDLRTTAGKLADLRRRKAEAQFPVGEAAVEK MAB_3631|M.abscessus_ATCC_1997 -MTTTESDSHTAADAAAPQPDIHTTAGKLADLRRRNEEALHPVGEAAVDK :::*******:*::* *: .*** *.:* Mflv_4774|M.gilvum_PYR-GCK VHAKGKLTARERILALLDEGSFVELDALAKHRSKNFGLEKNRPTGDGVVT Mvan_1677|M.vanbaalenii_PYR-1 VHAKGKLTARERILALLDEGSFVELDALAKHRSKNFGLEHNRPTGDGVVT MSMEG_1813|M.smegmatis_MC2_155 VHAKGKLTARERILALLDEGSFVELDALAKHRSTNFGLEKNRPLGDGVIT Mb3308|M.bovis_AF2122/97 VHAKGKLTARERIYALLDEDSFVELDALAKHRSTNFNLGEKRPLGDGVVT Rv3280|M.tuberculosis_H37Rv VHAKGKLTARERIYALLDEDSFVELDALAKHRSTNFNLGEKRPLGDGVVT MLBr_00731|M.leprae_Br4923 VHAKGKFTARERIYALLDDDSFVELDALARHRSTNFGLGENRPVGDGVVT MMAR_1256|M.marinum_M VHAKGKLTARERIYALLDEDSFVELDALAKHRSTNFGLESNRPVGDGVVT MUL_2632|M.ulcerans_Agy99 VHAKGKLTARERIYALLDEDSFVELDALAKHRSTNFGLESNRPVGDGVVT MAV_4250|M.avium_104 VHAKGKLTARERILALLDEDSFVELDALARHRSKNFGLENNRPLGDGVIT TH_4304|M.thermoresistible__bu VHAKGKLTARERVLALLDEGSFVELDQLARHRSTNFGLADKRPLGDGVVT MAB_3631|M.abscessus_ATCC_1997 IHAKGKLTARERIFALLDEGSFVELDALARHRSTNFGLESKRPLGDGVVT :*****:*****: ****:.****** **:***.**.* :** ****:* Mflv_4774|M.gilvum_PYR-GCK GYGTIDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN Mvan_1677|M.vanbaalenii_PYR-1 GYGTIDGRDVCVFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN MSMEG_1813|M.smegmatis_MC2_155 GYGTIDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN Mb3308|M.bovis_AF2122/97 GYGTIDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN Rv3280|M.tuberculosis_H37Rv GYGTIDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN MLBr_00731|M.leprae_Br4923 GYGTIDGRDVCIFSQDVTVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN MMAR_1256|M.marinum_M GYGTIDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAVKTGRPLIGIN MUL_2632|M.ulcerans_Agy99 GYGTIDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAVKTGRPLIGIN MAV_4250|M.avium_104 GYGTIDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN TH_4304|M.thermoresistible__bu GYGTIDGREVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGIN MAB_3631|M.abscessus_ATCC_1997 GFGTIDGRDVCIFSQDVSVFGGSLGEVYGEKIVKVMDLAIKTGRPLIGIN *:******:**:****.:***************** :**:********** Mflv_4774|M.gilvum_PYR-GCK DGAGARIQEGVVSLGLYSKIFHNNIKASGVIPQISLIMGAAAGGHVYSPA Mvan_1677|M.vanbaalenii_PYR-1 DGAGARIQEGVVSLGLYSRIFHNNIKASGVIPQISLIMGAAAGGHVYSPA MSMEG_1813|M.smegmatis_MC2_155 DGAGARIQEGVVSLGLYSRIFHNNIKASGVIPQISLIMGAAAGGHVYSPA Mb3308|M.bovis_AF2122/97 DGAGARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPA Rv3280|M.tuberculosis_H37Rv DGAGARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPA MLBr_00731|M.leprae_Br4923 DGAGARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPA MMAR_1256|M.marinum_M DGAGARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPA MUL_2632|M.ulcerans_Agy99 DGAGARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPA MAV_4250|M.avium_104 DGAGARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPA TH_4304|M.thermoresistible__bu DGAGARIQEGVVSLSLYSRIFHNNIRASGVIPQISLIMGAAAGGHVYSPA MAB_3631|M.abscessus_ATCC_1997 EGAGARIQEGVVSLGLYGQIFHRNVIASGVIPQISLIMGPAAGGHVYSPA :*************.**.:**:.*: *************.********** Mflv_4774|M.gilvum_PYR-GCK LTDFVIMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTVHY Mvan_1677|M.vanbaalenii_PYR-1 LTDFVIMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTVHY MSMEG_1813|M.smegmatis_MC2_155 LTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTAHY Mb3308|M.bovis_AF2122/97 LTDFVIMVDQTSQMFITGPDVIKTVTGEEVTMEELGGAHTHMAKSGTAHY Rv3280|M.tuberculosis_H37Rv LTDFVIMVDQTSQMFITGPDVIKTVTGEEVTMEELGGAHTHMAKSGTAHY MLBr_00731|M.leprae_Br4923 LTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTAHY MMAR_1256|M.marinum_M LTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMVKSGTAHY MUL_2632|M.ulcerans_Agy99 LTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEEIGGAHTHMVKSGTAHY MAV_4250|M.avium_104 LTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTLHY TH_4304|M.thermoresistible__bu LTDFVIMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTAHY MAB_3631|M.abscessus_ATCC_1997 LTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTAHY *****:**********************:*****:*******.**** ** Mflv_4774|M.gilvum_PYR-GCK VASGEQDALDYVRDLLSYLPPNNYAEPPRYPAPIS--GPIEENLTDEDLE Mvan_1677|M.vanbaalenii_PYR-1 VASGEQDALDYVRDLLSYLPPNNYAEPPRYPAPHAD-APIEESLTDEDLE MSMEG_1813|M.smegmatis_MC2_155 VASGEQDAFDYVRDLLSYLPPNNYADPPLYPVAIPE-GSIEETLTDEDLE Mb3308|M.bovis_AF2122/97 AASGEQDAFDYVRELLSYLPPNNSTDAPRYQAAAPT-GPIEENLTDEDLE Rv3280|M.tuberculosis_H37Rv AASGEQDAFDYVRELLSYLPPNNSTDAPRYQAAAPT-GPIEENLTDEDLE MLBr_00731|M.leprae_Br4923 VASGEQDAFDWVRDVLSYLPSNNFTDAPRYSKPVPH-GSIEDNLTAKDLE MMAR_1256|M.marinum_M VASGEQDAFEYVRELLSYLPPNNATDAPRYPAPAPE-GPIEENLTDEDLE MUL_2632|M.ulcerans_Agy99 VASGEQDAFEYVRELLSYLPPNNATDAPRYPAPAPE-GPIEENLTDEDLE MAV_4250|M.avium_104 VASGEQDAFDWVRDLLSYLPPNNATDPPRYAEPHPA-GAIEDNLTDEDLE TH_4304|M.thermoresistible__bu VASGEQDAFDYVRDLLSYLPPNNYADPPRYPAPVQH-GAIEDNLTDTDLE MAB_3631|M.abscessus_ATCC_1997 VASGEQDAFDYVRDILSYLPSNNASEPPRYPGPEPTDGAIEDHLTEEDLE .*******:::**::*****.** ::.* * . ..**: ** *** Mflv_4774|M.gilvum_PYR-GCK LDTLIPDSPNQPYDMHEVITRILDDDEFLEVQAGYAGNIVVGFGRVDGRP Mvan_1677|M.vanbaalenii_PYR-1 LDTLIPDSPNQPYDMHEVITRILDDDEFLEVQAGYAGNIVIGFGRVDGRP MSMEG_1813|M.smegmatis_MC2_155 LDTLIPDSPNQPYDMHEVITRILDDDEFLEVQAGYAGNIVVGFGRVEGRP Mb3308|M.bovis_AF2122/97 LDTLIPDSPNQPYDMHEVITRLLDD-EFLEIQAGYAQNIVVGFGRIDGRP Rv3280|M.tuberculosis_H37Rv LDTLIPDSPNQPYDMHEVITRLLDD-EFLEIQAGYAQNIVVGFGRIDGRP MLBr_00731|M.leprae_Br4923 LDTLIPDSPNQPYDMHEVVTRLLDEEEFLEVQAGYATNIVVGLGRIDDRP MMAR_1256|M.marinum_M LDTLIPDSPNQPYDMHEVITRILDEDEFLEIQAGYAQNIVVGFGRIEGRP MUL_2632|M.ulcerans_Agy99 LDTLIPDSPNQPYDMHEVITRILDEDEFLEIQAGYAQNIVVGFGRIEGRP MAV_4250|M.avium_104 LDTLIPDSPNQPYDMHEVITRILDDDEFLEIQGGYAQNIVVGFGRIDGRP TH_4304|M.thermoresistible__bu LDTLIPDSPNQPYDMHEVITRILDDDEFLEVQAGYAQNIIVGFGRVDGRP MAB_3631|M.abscessus_ATCC_1997 LDTLIPDSPNQPYDMHEVITRILDDDEFLEVQAGYAQNIIVGFGRIDGRS ******************:**:**: ****:*.*** **::*:**::.*. Mflv_4774|M.gilvum_PYR-GCK VGIVANQPTQFAGCLDINASEKAARFIRTCDCYNIPIVLLVDVPGFLPGT Mvan_1677|M.vanbaalenii_PYR-1 VGIVANQPTQFAGCLDINASEKAARFIRTCDCFNIPIVLLVDVPGFLPGT MSMEG_1813|M.smegmatis_MC2_155 VGIVANQPTQFAGCLDINASEKAARFIRTCDCFNIPIVLLVDVPGFLPGT Mb3308|M.bovis_AF2122/97 VGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGT Rv3280|M.tuberculosis_H37Rv VGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGT MLBr_00731|M.leprae_Br4923 VGIVANQPIQFAGCLDINASEKAARFVRVCDCFNIPIVMLVDVPGFLPGT MMAR_1256|M.marinum_M VGIVANQPTHFAGCLDIDASEKAARFVRTCDCFNIPIVMLVDVPGFLPGT MUL_2632|M.ulcerans_Agy99 VGIVANQPTHFAGCLDIDASEKAARFVRTCDCFNIPIVMLVDVPGFLPGT MAV_4250|M.avium_104 VGIVANQPTQFAGCLDINASEKAARFVRTCDCFNIPIIMLVDVPGFLPGT TH_4304|M.thermoresistible__bu VGIVANQPTQFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGT MAB_3631|M.abscessus_ATCC_1997 VGIVANQPTQFAGCLDINASEKAARFIRTCDCFGIPIITLEDVPGFLPGT ******** :*******:********:*.***:.***: * ********* Mflv_4774|M.gilvum_PYR-GCK DQEYNGIIRRGAKLLYAYGEATVAKVTVITRKSYGGAYCVMGSKDMGADV Mvan_1677|M.vanbaalenii_PYR-1 DQEYNGIIRRGAKLLYAYGEATVAKVTVITRKSYGGAYCVMGSKDMGADV MSMEG_1813|M.smegmatis_MC2_155 DQEYNGIIRRGAKLLYAYGEATVAKVTVITRKSYGGAYCVMGSKDMGADV Mb3308|M.bovis_AF2122/97 DQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDA Rv3280|M.tuberculosis_H37Rv DQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDV MLBr_00731|M.leprae_Br4923 EQEYDGIIRRGAKLLFAYGEATVPKITVITRKAYGGAYCVMGSKNMGCDV MMAR_1256|M.marinum_M GQEYNGIIRRGAKLLYAYGEATVPKVTVITRKAYGGAYCVMGSKDMGCDV MUL_2632|M.ulcerans_Agy99 GQEYNGIIRRGAKLLYAYGEATVPKVTVITRKAYGGAYCVMGSKDMGCDV MAV_4250|M.avium_104 GQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDV TH_4304|M.thermoresistible__bu DQEYNGIIRRGAKLLYAYGEATVAKITVITRKAYGGAYCVMGSKDMGADV MAB_3631|M.abscessus_ATCC_1997 EQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYDVMGSKHMGADV ***:**********:*******.*:******:***** *****.**.*. Mflv_4774|M.gilvum_PYR-GCK VVAWPTAQIAVMGASGAVGFVYRGQLKEAAANGEDVDALRLKLQQEYEDT Mvan_1677|M.vanbaalenii_PYR-1 VVAWPTAQIAVMGASGAVGFVYRQQLREAAANGEDVDALRLKLQQEYEDT MSMEG_1813|M.smegmatis_MC2_155 VVAWPTAQIAVMGASGAVGFVYRQQLKEAAKNGEDVDALRLELQQTYEDT Mb3308|M.bovis_AF2122/97 NLAWPTAQIAVMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQEYEDT Rv3280|M.tuberculosis_H37Rv NLAWPTAQIAVMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQEYEDT MLBr_00731|M.leprae_Br4923 NLAWPTAQIAVMGASGAVGFVYRKELAQAAKNGANVDELRLQLQQEYEDT MMAR_1256|M.marinum_M NLAWPTAQIAVMGASGAVGFVYRQQLKEAAEAGKDVDALRLQLQQEYEDT MUL_2632|M.ulcerans_Agy99 NLAWPTAQIAVMGASGAVGFVYRQQLKKAAEAGKDVDALLLQLQQEYEDT MAV_4250|M.avium_104 NIAWPSAQIAVMGASGAVGFVYRKQLAEAAKKGEDVDALRLQLQQEYEDT TH_4304|M.thermoresistible__bu CVAWPTAQIAVMGASGAVGFVYRPQLAEAAKKGEDVDALRLRLQQEYEDT MAB_3631|M.abscessus_ATCC_1997 NVAWPTAQIAVMGASGAVGFVYRSQLAEAAKNGDDVDALRLQLQAEYEDT :***:***************** :* :** * ::* * *.** **** Mflv_4774|M.gilvum_PYR-GCK LVNPYIAAERGYVDAVIPPSHTRGYVATALKLLERKVVQTPPKKHGNIPL Mvan_1677|M.vanbaalenii_PYR-1 LVNPYIAAERGYVDAVILPSHTRGYVATALKLLERKVVQTPPKKHGNIPL MSMEG_1813|M.smegmatis_MC2_155 LVNPYIAAERGYVDAVIPPSHTRGYVANALRLLERKIVQMPPKKHGNIPL Mb3308|M.bovis_AF2122/97 LVNPYVAAERGYVDAVIPPSHTRGYIGTALRLLERKIAQLPPKKHGNVPL Rv3280|M.tuberculosis_H37Rv LVNPYVAAERGYVDAVIPPSHTRGYIGTALRLLERKIAQLPPKKHGNVPL MLBr_00731|M.leprae_Br4923 LVNPYIAAERGYVDAVIPPSHTRGYIATALHLLERKIAHLPPKKHGNIPL MMAR_1256|M.marinum_M LVNPYIAAERGYVDAVIPPSYTRGYIGTALRLLERKIAQQPPKKHGNIPL MUL_2632|M.ulcerans_Agy99 LVNPYIAAERGYVDAVIPPSYTRGYIGTALRLLERKIAQQPPKKHGNIPL MAV_4250|M.avium_104 LVNPYVAAERGYVDAVIPPSHTRGYIATALRLLERKIAHLPPKKHGNIPL TH_4304|M.thermoresistible__bu LVNPYIAAERGYVDAVIPPSHTRGYIATSLRLLERKIAQVPPKKHGNIPL MAB_3631|M.abscessus_ATCC_1997 LVNPYIAAERGYVDAVIPPSHTRGYIATSLRLLDRKIVRLPPKKHGNIPL *****:*********** **:****:..:*:**:**:.: *******:**