For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MMTTRRKTAAVAGIAAVAIFGAACSSEEAGNNASSATSSATSAMESATSEMTTSSSAPMADPAANLIGSG CAAYAEQVPEGPGSVAGMAADPVTVAASNNPMLTTLTQALSGQLNPNVNLVDTLDGAEFTVFAPTDDAFA KIDPATLETLKTDNELLTSILTYHVVPGQAAPDAVAGEHTTVQGAPLTVTGAGNDLMVNDAGLVCGGVKT ANATVYMIDTVLMPPAN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4084 | - | - | 100% (227) | beta-Ig-H3/fasciclin |
M. gilvum PYR-GCK | Mflv_4085 | - | 8e-74 | 70.47% (193) | beta-Ig-H3/fasciclin |
M. gilvum PYR-GCK | Mflv_2119 | - | 4e-33 | 37.84% (222) | beta-Ig-H3/fasciclin |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2898 | mpb83 | 8e-73 | 63.00% (227) | cell surface lipoprotein MPB83 (lipoprotein P23) |
M. tuberculosis H37Rv | Rv2873 | mpt83 | 9e-73 | 63.00% (227) | cell surface lipoprotein mpt83 (lipoprotein P23) |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4543c | - | 6e-06 | 29.70% (101) | hypothetical protein MAB_4543c |
M. marinum M | MMAR_1834 | mpt70 | 3e-70 | 66.84% (196) | major secreted immunogenic protein Mpt70 |
M. avium 104 | MAV_1082 | - | 1e-05 | 48.21% (56) | hypothetical protein MAV_1082 |
M. smegmatis MC2 155 | MSMEG_5196 | - | 8e-30 | 38.22% (225) | fasciclin domain-containing protein |
M. thermoresistible (build 8) | TH_1983 | - | 5e-30 | 35.75% (207) | fasciclin domain protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2259 | - | 1e-111 | 88.55% (227) | beta-Ig-H3/fasciclin |
CLUSTAL 2.0.9 multiple sequence alignment Mb2898|M.bovis_AF2122/97 MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTT- Rv2873|M.tuberculosis_H37Rv MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTT- Mflv_4084|M.gilvum_PYR-GCK MMTTRRKTAAVAGIAAVAIFGAACSSEEAGNNASSATSSATSAMESATSE Mvan_2259|M.vanbaalenii_PYR-1 MMTTRRKTAAVAGIAAVAIFGAACSSEGADSTASSATTTSESAMESATTA MMAR_1834|M.marinum_M -MKFHNPAIAATGLAAAAAVGLVVAT-------------APSAMAS---- MSMEG_5196|M.smegmatis_MC2_155 MHTRTKTLGAAAAIAAIATSLPLAVTAYAEPETTTEAEP----TVEIPD- TH_1983|M.thermoresistible__bu VQTRTKVFGAVTGAAAIAFSLPLAGTAHGEPGDPPTPAPDLMVTADIPD- MAB_4543c|M.abscessus_ATCC_199 -MRNRTRTAILAGAAAAVLILSACSSDNKGDDAKSEHSGHSGMSGMTTT- MAV_1082|M.avium_104 -MREITKRTAAFSVALAAFALIGGACSKSNNAGQTTSPASSSATSSATS- . * . Mb2898|M.bovis_AF2122/97 ------AAMADPAADLIGRGCAQYAAQNPTGPGSVAGMAQDPVATAASNN Rv2873|M.tuberculosis_H37Rv ------AAMADPAADLIGRGCAQYAAQNPTGPGSVAGMAQDPVATAASNN Mflv_4084|M.gilvum_PYR-GCK MTTSSSAPMADPAANLIGSGCAAYAEQVPEGPGSVAGMAADPVTVAASNN Mvan_2259|M.vanbaalenii_PYR-1 MTTSSAAPSADPAANLIGSGCAAYAEQVPDGPGSVAGMAADPVTVAASNN MMAR_1834|M.marinum_M -----------PPDTLVGPGCSAYAQQVPTGPGSVAGMAAEPVAVAASNN MSMEG_5196|M.smegmatis_MC2_155 ---------------PQGPGCDDFKKAVP----SWKALNDVPVSQALAAI TH_1983|M.thermoresistible__bu ---------------PEGPGCDAFKAEVS----DFKNLARVPVGDALAAI MAB_4543c|M.abscessus_ATCC_199 -------LDTNAAAPVSDHNDADVTFAQQMIMHHQQAVEMSKLTEGRTAN MAV_1082|M.avium_104 -----------------GTSGTSASAAPS----------ESTGTSGAPSS . . . . Mb2898|M.bovis_AF2122/97 PMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQL Rv2873|M.tuberculosis_H37Rv PMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQL Mflv_4084|M.gilvum_PYR-GCK PMLTTLTQALSGQLNPNVNLVDTLDGAEFTVFAPTDDAFAKIDPATLETL Mvan_2259|M.vanbaalenii_PYR-1 PMLKTLTQALSGQLNPGVNLVDTLNGGEFTVFAPTDDAFAKIDPATIETL MMAR_1834|M.marinum_M PMLTTLTSALSGKLNPQVNLVDTLNGGQFTVFAPTDAAFGKIDAATIDSL MSMEG_5196|M.smegmatis_MC2_155 PEISTFNAAVSGGLNPAVNIDPVLDNGPYVVFAPTNEAFAKLAPGQLDAI TH_1983|M.thermoresistible__bu PQISTFNSAISGQLNPEVNIVPVLNNGPYVVFAPTNEAFEELPAGKLDAL MAB_4543c|M.abscessus_ATCC_199 PAVLDLAKNIETAQQPEIDTFTGWLKQWNQPLMPEGHDPAGHMPGMVDAP MAV_1082|M.avium_104 TQINGANGTPYTVEGPILAKYNALDDKARKDLGAPTGNEQKNPDGGVYQQ . : * : : . . : Mb2898|M.bovis_AF2122/97 KTDAKLLSSILTYHVIAGQASPSRIDGTHQTLQGADLTVIGARDDLMVNN Rv2873|M.tuberculosis_H37Rv KTDAKLLSSILTYHVIAGQASPSRIDGTHQTLQGADLTVIGARDDLMVNN Mflv_4084|M.gilvum_PYR-GCK KTDNELLTSILTYHVVPGQAAPDAVAGEHTTVQGAPLTVTGAGNDLMVND Mvan_2259|M.vanbaalenii_PYR-1 KTDSDLLTSILTYHVVPGQAAPDQVAGEHATVQGATVTVTGAGNDLKVNE MMAR_1834|M.marinum_M KTDAPLLKKILTYHVVPGQLSPSQVVGTHSTVEGASLTVTGSGNDLQVGD MSMEG_5196|M.smegmatis_MC2_155 AADPAALTSLDYYHAFLGLLGNDDVKGQRPTQQGAEIKVTGKGGDIEVND TH_1983|M.thermoresistible__bu AADPAALTQLGYYHAFLGLLGPDTVKGQRPTQDGAEIKVTGEGGDITVND MAB_4543c|M.abscessus_ATCC_199 VLDR---MKTLNGEVFDQLWLQSMIAHHQGAIAMSNAELSGG----QYPA MAV_1082|M.avium_104 FDGGVIVSKTQAYVVWGKIRDKWNQLGGSQGQLGYPTSDEVDTPDGAKKS . . . Mb2898|M.bovis_AF2122/97 -AGLVCGGVHTANATVYMIDTVLMPPAQ---------------------- Rv2873|M.tuberculosis_H37Rv -AGLVCGGVHTANATVYMIDTVLMPPAQ---------------------- Mflv_4084|M.gilvum_PYR-GCK -AGLVCGGVKTANATVYMIDTVLMPPAN---------------------- Mvan_2259|M.vanbaalenii_PYR-1 -AGLVCGGVKTANATVYMIDTVLMPPAN---------------------- MMAR_1834|M.marinum_M -AAVVCGGVQTANAVVYMIDTVLMPPS----------------------- MSMEG_5196|M.smegmatis_MC2_155 TAKLVCGAIHAQNARIYLIDTVLDPNNPPEALTPTVSGTSTTPTTTTETT TH_1983|M.thermoresistible__bu TAEVVCGGIQAANARIYLIDKVLDPAQAPDPITP---GSSSTNSSSDSSD MAB_4543c|M.abscessus_ATCC_199 AKQLAQQIIDNQQPEIDTMQGLLKG------------------------- MAV_1082|M.avium_104 TFEHGTITWKPGDAEATVTTG----------------------------- . :. Mb2898|M.bovis_AF2122/97 ------------------------- Rv2873|M.tuberculosis_H37Rv ------------------------- Mflv_4084|M.gilvum_PYR-GCK ------------------------- Mvan_2259|M.vanbaalenii_PYR-1 ------------------------- MMAR_1834|M.marinum_M ------------------------- MSMEG_5196|M.smegmatis_MC2_155 EPAPAEAPESAETPEAMPAADAPIG TH_1983|M.thermoresistible__bu SSGSSDSSE-----QALPAEDPTA- MAB_4543c|M.abscessus_ATCC_199 ------------------------- MAV_1082|M.avium_104 -------------------------