For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLIGRGCAQYAAQ NPTGPGSVAGMAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATI DQLKTDAKLLSSILTYHVIAGQASPSRIDGTHQTLQGADLTVIGARDDLMVNNAGLVCGGVHTANATVYM IDTVLMPPAQ
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2898 | mpb83 | - | 100% (220) | cell surface lipoprotein MPB83 (lipoprotein P23) |
| M. bovis AF2122 / 97 | Mb2900 | mpb70 | 1e-67 | 70.27% (185) | major secreted immunogenic protein mpb70 precursor |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4084 | - | 1e-72 | 63.00% (227) | beta-Ig-H3/fasciclin |
| M. tuberculosis H37Rv | Rv2873 | mpt83 | 1e-122 | 100.00% (220) | cell surface lipoprotein mpt83 (lipoprotein P23) |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1834 | mpt70 | 4e-67 | 66.67% (192) | major secreted immunogenic protein Mpt70 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_5196 | - | 7e-28 | 37.26% (212) | fasciclin domain-containing protein |
| M. thermoresistible (build 8) | TH_1983 | - | 1e-32 | 39.13% (207) | fasciclin domain protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2259 | - | 3e-72 | 63.44% (227) | beta-Ig-H3/fasciclin |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2898|M.bovis_AF2122/97 MINVQAKPAAAASLAAIAIAFLAGCSS--------TKPVSQDTSPKPATS
Rv2873|M.tuberculosis_H37Rv MINVQAKPAAAASLAAIAIAFLAGCSS--------TKPVSQDTSPKPATS
Mflv_4084|M.gilvum_PYR-GCK MMTTRRKTAAVAGIAAVAI-FGAACSSEEAGNNASSATSSATSAMESATS
Mvan_2259|M.vanbaalenii_PYR-1 MMTTRRKTAAVAGIAAVAI-FGAACSSEGADSTASSATTTSESAMESATT
MMAR_1834|M.marinum_M -MKFHNPAIAATGLAAAAA-----------------------------VG
MSMEG_5196|M.smegmatis_MC2_155 MHTRTKTLGAAAAIAAIAT-----------------SLPLAVTAYAEPET
TH_1983|M.thermoresistible__bu VQTRTKVFGAVTGAAAIAF-----------------SLPLAGTAHGEPGD
. *.:. ** *
Mb2898|M.bovis_AF2122/97 PAAPVTTAAMADPAADLIGRGCAQYAAQNPTGPGSVAGMAQDPVATAASN
Rv2873|M.tuberculosis_H37Rv PAAPVTTAAMADPAADLIGRGCAQYAAQNPTGPGSVAGMAQDPVATAASN
Mflv_4084|M.gilvum_PYR-GCK EMTTSSSAPMADPAANLIGSGCAAYAEQVPEGPGSVAGMAADPVTVAASN
Mvan_2259|M.vanbaalenii_PYR-1 AMTTSSAAPSADPAANLIGSGCAAYAEQVPDGPGSVAGMAADPVTVAASN
MMAR_1834|M.marinum_M LVVATAPSAMASPPDTLVGPGCSAYAQQVPTGPGSVAGMAAEPVAVAASN
MSMEG_5196|M.smegmatis_MC2_155 TTEAEP----TVEIPDPQGPGCDDFKKAVP----SWKALNDVPVSQALAA
TH_1983|M.thermoresistible__bu PPTPAPDLMVTADIPDPEGPGCDAFKAEVS----DFKNLARVPVGDALAA
. . : * ** : . . : ** * :
Mb2898|M.bovis_AF2122/97 NPMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQ
Rv2873|M.tuberculosis_H37Rv NPMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQ
Mflv_4084|M.gilvum_PYR-GCK NPMLTTLTQALSGQLNPNVNLVDTLDGAEFTVFAPTDDAFAKIDPATLET
Mvan_2259|M.vanbaalenii_PYR-1 NPMLKTLTQALSGQLNPGVNLVDTLNGGEFTVFAPTDDAFAKIDPATIET
MMAR_1834|M.marinum_M NPMLTTLTSALSGKLNPQVNLVDTLNGGQFTVFAPTDAAFGKIDAATIDS
MSMEG_5196|M.smegmatis_MC2_155 IPEISTFNAAVSGGLNPAVNIDPVLDNGPYVVFAPTNEAFAKLAPGQLDA
TH_1983|M.thermoresistible__bu IPQISTFNSAISGQLNPEVNIVPVLNNGPYVVFAPTNEAFEELPAGKLDA
* :.*:. *:** *** **: .*:.. :.*****: ** :: .. ::
Mb2898|M.bovis_AF2122/97 LKTDAKLLSSILTYHVIAGQASPSRIDGTHQTLQGADLTVIGARDDLMVN
Rv2873|M.tuberculosis_H37Rv LKTDAKLLSSILTYHVIAGQASPSRIDGTHQTLQGADLTVIGARDDLMVN
Mflv_4084|M.gilvum_PYR-GCK LKTDNELLTSILTYHVVPGQAAPDAVAGEHTTVQGAPLTVTGAGNDLMVN
Mvan_2259|M.vanbaalenii_PYR-1 LKTDSDLLTSILTYHVVPGQAAPDQVAGEHATVQGATVTVTGAGNDLKVN
MMAR_1834|M.marinum_M LKTDAPLLKKILTYHVVPGQLSPSQVVGTHSTVEGASLTVTGSGNDLQVG
MSMEG_5196|M.smegmatis_MC2_155 IAADPAALTSLDYYHAFLGLLGNDDVKGQRPTQQGAEIKVTGKGGDIEVN
TH_1983|M.thermoresistible__bu LAADPAALTQLGYYHAFLGLLGPDTVKGQRPTQDGAEIKVTGEGGDITVN
: :* *..: **.. * . . : * : * :** :.* * .*: *.
Mb2898|M.bovis_AF2122/97 N-AGLVCGGVHTANATVYMIDTVLMPPAQ---------------------
Rv2873|M.tuberculosis_H37Rv N-AGLVCGGVHTANATVYMIDTVLMPPAQ---------------------
Mflv_4084|M.gilvum_PYR-GCK D-AGLVCGGVKTANATVYMIDTVLMPPAN---------------------
Mvan_2259|M.vanbaalenii_PYR-1 E-AGLVCGGVKTANATVYMIDTVLMPPAN---------------------
MMAR_1834|M.marinum_M D-AAVVCGGVQTANAVVYMIDTVLMPPS----------------------
MSMEG_5196|M.smegmatis_MC2_155 DTAKLVCGAIHAQNARIYLIDTVLDPNNPPEALTPTVSGTSTTPTTTTET
TH_1983|M.thermoresistible__bu DTAEVVCGGIQAANARIYLIDKVLDPAQAPDPITP---GSSSTNSSSDSS
: * :***.::: ** :*:**.** *
Mb2898|M.bovis_AF2122/97 --------------------------
Rv2873|M.tuberculosis_H37Rv --------------------------
Mflv_4084|M.gilvum_PYR-GCK --------------------------
Mvan_2259|M.vanbaalenii_PYR-1 --------------------------
MMAR_1834|M.marinum_M --------------------------
MSMEG_5196|M.smegmatis_MC2_155 TEPAPAEAPESAETPEAMPAADAPIG
TH_1983|M.thermoresistible__bu DSSGSSDSSE-----QALPAEDPTA-