For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RNRTRTAILAGAAAAVLILSACSSDNKGDDAKSEHSGHSGMSGMTTTLDTNAAAPVSDHNDADVTFAQQM IMHHQQAVEMSKLTEGRTANPAVLDLAKNIETAQQPEIDTFTGWLKQWNQPLMPEGHDPAGHMPGMVDAP VLDRMKTLNGEVFDQLWLQSMIAHHQGAIAMSNAELSGGQYPAAKQLAQQIIDNQQPEIDTMQGLLKG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4543c | - | - | 100% (209) | hypothetical protein MAB_4543c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2836 | - | 3e-36 | 41.10% (219) | hypothetical protein Mflv_2836 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_5017 | - | 1e-30 | 39.51% (205) | lipoprotein |
M. thermoresistible (build 8) | TH_3901 | - | 2e-38 | 42.18% (211) | PUTATIVE putative protein of unknown function DUF305 |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_5858 | - | 4e-33 | 38.64% (220) | hypothetical protein Mvan_5858 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2836|M.gilvum_PYR-GCK -------------MAAAALFVSACSNATTD--SQSSTS--SPAAPSASPS Mvan_5858|M.vanbaalenii_PYR-1 -MRQKRTVAVGAAAVAVAAVIASCSNTAGN--EASSTA--SPAP--VQTS MSMEG_5017|M.smegmatis_MC2_155 ---MKKVLAGGISVFALSFVVAGCGSDTTA--EQAQTT--SAAA---APS MAB_4543c|M.abscessus_ATCC_199 -MRNRTRTAILAGAAAAVLILSACSSDNKGDDAKSEHSGHSGMSGMTTTL TH_3901|M.thermoresistible__bu MTTTTARIVALLAALATAAFLAGCSSTDTG--STPETS--TPETGTDTTQ * .::.*.. .. : : . . Mflv_2836|M.gilvum_PYR-GCK AASSDAT---HNDADVTFAQGMIPHHQQAIEMSDMLLGKQGIDPEVISLA Mvan_5858|M.vanbaalenii_PYR-1 AATPAAS---HNQADMMFTRHMIPHHQQAIEMSDMIIAKQGIDPRVVDLA MSMEG_5017|M.smegmatis_MC2_155 TTQQGRP---HNDADVMFAQHMIPHHQQAVEMSDIILGKPDIDPRVTDLA MAB_4543c|M.abscessus_ATCC_199 DTNAAAPVSDHNDADVTFAQQMIMHHQQAVEMSKLTEGRT-ANPAVLDLA TH_3901|M.thermoresistible__bu G-QAAA----HNDADIAFVTDMIPHHQQALELSALVPDRS-ENTQLIELA **:**: *. ** *****:*:* : : :. : .** Mflv_2836|M.gilvum_PYR-GCK DEIKNAQGPEIEQMQGWLQEWGASSSPAPATSTAMPGHDMPAHQMPGRDM Mvan_5858|M.vanbaalenii_PYR-1 EQIKAAQGPEIAQMQGWLDEWGMPGNMPPGHGDMPGGPMMPG--MPG--M MSMEG_5017|M.smegmatis_MC2_155 DQIQAAQGPEIDQMQSWLKQWGN-----PPMGDHEG-------------M MAB_4543c|M.abscessus_ATCC_199 KNIETAQQPEIDTFTGWLKQWNQ-------------PLMPEG-------H TH_3901|M.thermoresistible__bu AGIAAAQDPEIQAMRALLVQWNAD-DPDGEHGDHAVPGMPPG-------M * ** *** : . * :*. Mflv_2836|M.gilvum_PYR-GCK GKMPGMGGSGHGMMSEADMAALQNAQGAEASRLFLTQMIAHHKGAIMMAQ Mvan_5858|M.vanbaalenii_PYR-1 EGMPGMEG----MMSPADMQALQNAQGVEASKLFLSQMIRHHEGAITMAE MSMEG_5017|M.smegmatis_MC2_155 GDHGGMAG----MVSDADMTALRDAQGVDAAKLFLTHMIAHHEGAIDMAQ MAB_4543c|M.abscessus_ATCC_199 DPAGHMPG----MVDAPVLDRMKTLNGEVFDQLWLQSMIAHHQGAIAMSN TH_3901|M.thermoresistible__bu GPHHDMPG----MVDPATMARLESLRGTEFDRLWLESMIAHHEGAVEMAQ * * *:. . : :. .* :*:* ** **:**: *:: Mflv_2836|M.gilvum_PYR-GCK QEIDNGQFPAAVEMARNIVSSQQAEIDTMQGMLDK- Mvan_5858|M.vanbaalenii_PYR-1 NEIENGQSPDVVELAKTIASSQRTEIDTMNQILKSL MSMEG_5017|M.smegmatis_MC2_155 EEVNEGRFEDAVQMARTIVITQEQEIKDMRQVLDSL MAB_4543c|M.abscessus_ATCC_199 AELSGGQYPAAKQLAQQIIDNQQPEIDTMQGLLKG- TH_3901|M.thermoresistible__bu TELAEGENVDARTLAQQIIDAQQAEIDQMRQMQEAS *: *. . :*: * *. **. *. : .