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MCATCGCGEDGTTITVPVQGHDHHHNHPHDQPDDHHQHHHPHPTETVTLEQKVLAKNDGIAARNRRWLTE RDIVAFNMTSSPGSGKTTLLERTIRDLHPTRSVAVIEGDQETLLDAERIQATGARVVQVNTGAGCHLDAE MIRRALDTLAPRRARVLFIENVGNLVCPALFDLGETSKVVVISVTEGADKPLKYPHMFAAADLVLINKSD LLPYVDFDIDACASAARSVNPGVGILTLSAKTGDGVEEWYDWISQRSIYDARVPIAGGRPAPEVRPHQEI RRR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_3978 | - | - | 100% (283) | hydrogenase accessory protein HypB |
| M. gilvum PYR-GCK | Mflv_1684 | - | 4e-09 | 33.87% (186) | urease accessory protein UreG |
| M. gilvum PYR-GCK | Mflv_3350 | - | 6e-08 | 29.44% (197) | urease accessory protein UreG |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1883 | ureG | 6e-08 | 25.75% (233) | urease accessory protein ureG |
| M. tuberculosis H37Rv | Rv1852 | ureG | 6e-08 | 25.75% (233) | urease accessory protein ureG |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2427 | - | 4e-08 | 30.05% (183) | urease accessory protein (UreG) |
| M. marinum M | MMAR_1871 | hypB | 4e-54 | 46.47% (241) | nickel cation-binding GTPase, HypB |
| M. avium 104 | MAV_2680 | hypB | 6e-30 | 53.10% (113) | hydrogenase accessory protein HypB |
| M. smegmatis MC2 155 | MSMEG_2721 | hypB | 1e-99 | 69.38% (258) | hydrogenase accessory protein HypB |
| M. thermoresistible (build 8) | TH_2818 | - | 3e-58 | 45.85% (253) | PUTATIVE nickel cation-binding GTPase, HypB |
| M. ulcerans Agy99 | MUL_3027 | ureG | 1e-09 | 26.16% (237) | urease accessory protein UreG |
| M. vanbaalenii PYR-1 | Mvan_2417 | - | 1e-100 | 67.04% (267) | hydrogenase accessory protein HypB |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3978|M.gilvum_PYR-GCK MCATCGCG-EDGTTITVPVQGHDHHHNHPHDQPDDHHQHHHPHPTETVTL
MSMEG_2721|M.smegmatis_MC2_155 MCATCGCGGTDGAGVPVTLAGETPPHHHEHDHDHDHPHTHDHPPTETVTL
Mvan_2417|M.vanbaalenii_PYR-1 MCATCGCG-DDRSTITVP--GASPEHHHPHEHNHPH--------TRTVEL
MMAR_1871|M.marinum_M --MGRFHRHDDGTVHTHEH-----EH-HQHGDHTGYQT-----GPARIEV
TH_2818|M.thermoresistible__bu --VGRFHRHDDGTVHSHEHGDHAHEHPHDHGDHSGYQT-----GGQRIEV
MAV_2680|M.avium_104 --------------------------------------------------
Mb1883|M.bovis_AF2122/97 ------------------------------------------------MA
Rv1852|M.tuberculosis_H37Rv ------------------------------------------------MA
MUL_3027|M.ulcerans_Agy99 ------------------------------------------------MA
MAB_2427|M.abscessus_ATCC_1997 ------------------------------------------------MP
Mflv_3978|M.gilvum_PYR-GCK EQKVLAKNDGIAARNRRWLTERDIVAFNMTSSPGSGKTTLLERTIRDLHP
MSMEG_2721|M.smegmatis_MC2_155 EQRVLAKNDMLAQQNREWLTARGIVALNITSSPGAGKTTLLERTIRDLGR
Mvan_2417|M.vanbaalenii_PYR-1 EHRVLARNDAIAEQNRRWLEHRRILALNLTSSPGSGKTTLLERTIRDLGT
MMAR_1871|M.marinum_M LEEIFAENDVRADLNRRAFETNGIRALNLMSSPGSGKTTVLQATLDQLAS
TH_2818|M.thermoresistible__bu LESIFAENDSRAAINRKIFEENGIRALNLMSSPGSGKTTVLAATLDELAN
MAV_2680|M.avium_104 --------------------------------------------------
Mb1883|M.bovis_AF2122/97 THSHP-HSHTVPARPRRVRKPGEPLRIGVGGPVGSGKTALVAALCRQLRG
Rv1852|M.tuberculosis_H37Rv THSHP-HSHTVPARPRRVRKPGEPLRIGVGGPVGSGKTALVAALCRQLRG
MUL_3027|M.ulcerans_Agy99 KHSHD-HTHDHHDRPRRVRKPGEPLRIGVGGPVGSGKTALVAAICRQLRD
MAB_2427|M.abscessus_ATCC_1997 PHLIDGQPHQHIDRPRRVRQPGEPLRIGIGGPVGSGKTALVAALCRTLRD
Mflv_3978|M.gilvum_PYR-GCK TRSVAVIEGDQETLLDAERIQATGAR----VVQVNT----GAGCHLDAEM
MSMEG_2721|M.smegmatis_MC2_155 DHAVAVIEGDQETLLDADRIRAAGAR----AVQVNT----GAGCHLDASM
Mvan_2417|M.vanbaalenii_PYR-1 RSPVSVIEGDQETLLDVERIRATGVP----AVQINT----GAGCHLDAQM
MMAR_1871|M.marinum_M EFAIGVIEGDIATDLDAAKLSGRGAQ----VSLLNTSNGFGGECHLDAPM
TH_2818|M.thermoresistible__bu QIAIGIIEGDIATDLDAAKLGGRGAQ----ISLLNTNNGFGGECHLDAPM
MAV_2680|M.avium_104 -------------------------------------------------M
Mb1883|M.bovis_AF2122/97 ELSLAVLTNDIYTTEDADFLRTHAVLPDDRIAAVQTGGCPHTAIRDDITA
Rv1852|M.tuberculosis_H37Rv ELSLAVLTNDIYTTEDADFLRTHAVLPDDRIAAVQTGGCPHTAIRDDITA
MUL_3027|M.ulcerans_Agy99 ELSLAVLTNDIYTTEDADFLRKHAVLPDSRIIAVQTGGCPHTAIRDDITA
MAB_2427|M.abscessus_ATCC_1997 EISVAVLTNDIYTTEDADFLRRHAVLPDERITAVQTGGCPHTAIRDDITA
Mflv_3978|M.gilvum_PYR-GCK IRRALDTLAPR--RARVLFIENVGNLVCPALFDLGETSKVVVISVTEGAD
MSMEG_2721|M.smegmatis_MC2_155 VHRAIDALDPS--PGSLLFIENVGNLVCPALFDLGEYQKVVVISVTEGTD
Mvan_2417|M.vanbaalenii_PYR-1 VAGALTALDPP--QRSLLFIENVGNLVCPALFDLGERSKVVIISVTEGAD
MMAR_1871|M.marinum_M VNRALPGLDLP--NLDLVIVENVGNLVCPAEFDVGEHAKAMVYSVTEGED
TH_2818|M.thermoresistible__bu VNRALQDLDLD--HLELVVIENVGNLVCPAEFDVGEHAKAMVYSVAEGED
MAV_2680|M.avium_104 VNRALQGLDLT--TLDLVIIENVGNLVCPAEFDVGEHAKAMVYSVTKGDD
Mb1883|M.bovis_AF2122/97 NLDAIDELMAAHDALDLILVESGGDNLTATFSSGLVDAQIFVIDVAGGDK
Rv1852|M.tuberculosis_H37Rv NLDAIDELMAAHDALDLILVESGGDNLTATFSSGLVDAQIFVIDVAGGDK
MUL_3027|M.ulcerans_Agy99 NLDAIDDLIAAHDALDLILVESGGDNLTATFSSGLVDVQIFVIDVAGGDK
MAB_2427|M.abscessus_ATCC_1997 NLDAIEDLIATNEPLDLILVESGGDNLTATFSSGLIDVQIFVIDVAGGDK
*: * ::.:*. *: : .: . : .: .*: * .
Mflv_3978|M.gilvum_PYR-GCK KPLKYPHMFAAADLVLINKSDLLPYVDFDIDACASAARSVNPGVGILTLS
MSMEG_2721|M.smegmatis_MC2_155 KPLKYPHMFAAAGLVILNKIDLLPYVNFDIETCCRYARSVNPAVTILQTS
Mvan_2417|M.vanbaalenii_PYR-1 KPLKYPHMFAAAGLVLINKSDLLPYVDFDVDRCTGYARSVHPGVDVMTLS
MMAR_1871|M.marinum_M KPLKYPVMFRCVDVVLLNKIDLVPYLDADVDTYVAHIREVNAHATILPVS
TH_2818|M.thermoresistible__bu KPLKYPVMFRAVDVVLLNKIDLVPYLDVDVDRYIAHIREVNPTARILPVS
MAV_2680|M.avium_104 KPMKYPVMFRAVDVVLLNKIDLVPYLDVDVDSYIGHVREVNPTATILPVS
Mb1883|M.bovis_AF2122/97 VPRKGGPGVTYSDLLVVNKTDLAALVGADLAVMARDADAVRDGRPTVLQS
Rv1852|M.tuberculosis_H37Rv VPRKGGPGVTYSDLLVVNKTDLAALVGADLAVMARDADAVRDGRPTVLQS
MUL_3027|M.ulcerans_Agy99 VPRKGGPGVTFSDLLVVNKTDLAPLVGADLKVMARDAEAVRDGRPTVLQS
MAB_2427|M.abscessus_ATCC_1997 VPRKGGPGVTFSDLLVINKTDLAPMVGADLTVMARDAAAVREGRPTAMIS
* * . .::::** ** . :. *: *. *
Mflv_3978|M.gilvum_PYR-GCK AKTGDGVEEWYDWISQRSIYDARVPIAGGRPAPEVRPHQEIRRR
MSMEG_2721|M.smegmatis_MC2_155 ATRGDGLSAWYEWLGER-IH------------------------
Mvan_2417|M.vanbaalenii_PYR-1 AKTGEGTADWYRWIDAQREHPGADPSSG--PTVDNGYPRE----
MMAR_1871|M.marinum_M ARTGAGMTAWFDWLRRFAQGLPPE--------------------
TH_2818|M.thermoresistible__bu ARTGEGMDAWFDWLRQFLRG------------------------
MAV_2680|M.avium_104 ARTGVGMPDWLAWLRRFMEGTPTA--------------------
Mb1883|M.bovis_AF2122/97 LTEDPAASDVVAWVRSQLAADGV---------------------
Rv1852|M.tuberculosis_H37Rv LTEDPAASDVVAWVRSQLAADGV---------------------
MUL_3027|M.ulcerans_Agy99 LTEDPAATKVLDWVRSQLAAAG----------------------
MAB_2427|M.abscessus_ATCC_1997 LTEDPAASEVLAWVRAHLTEAHQTDHAH----------------
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