For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSQGLDLAVIGSGGAAMAAAIRATALGKSVVMIERGIFGGTCVNTGCVPSKALIAAAEARHTAADTARFP GIATTAGPVDMAALIAGTHDLVESLRSEKYLNVAESYGWQRIQGQARFAGTPDAPVIEVGDATIEAEHYL IATGANPVIPPAFEGVAYLTSTTAMEVTEVPESLLVIGGGYVALEQAQLFARLGSTVTVLVRSTLASKEE PEVGMALLEVFADDGIRVVRRATVSEVEQADDQVTVTATITGGTQQFRAAKVLVATGRRPNTDGLNLEAV QVKTGENNEVVVSDGLQSSNPRIWAAGDVTGHREFVYVAAHHGAMVADNIFTDAGRRVDYRHLPRVTFTS PAVGAAGTTEAELLAAGTRCDCRVLPLKHVPRAVVNRDTRGFIKLVADAGTGRIHGITAVAKDAGEIAAA AVYILDAAMTVDQVAGSWAPYLTMAEGIKIAAQSFSADMSRLSCCAS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3213 | - | - | 100% (467) | mercuric reductase |
M. gilvum PYR-GCK | Mflv_3059 | - | 1e-61 | 34.67% (450) | mercuric reductase |
M. gilvum PYR-GCK | Mflv_0114 | - | 7e-44 | 27.57% (457) | dihydrolipoamide dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0471 | lpd | 8e-43 | 28.69% (467) | dihydrolipoamide dehydrogenase |
M. tuberculosis H37Rv | Rv0462 | lpd | 8e-43 | 28.69% (467) | dihydrolipoamide dehydrogenase |
M. leprae Br4923 | MLBr_02387 | lpd | 6e-43 | 27.53% (465) | dihydrolipoamide dehydrogenase |
M. abscessus ATCC 19977 | MAB_3014 | - | 3e-60 | 32.74% (452) | mercuric reductase |
M. marinum M | MMAR_3101 | lpd_1 | 3e-60 | 33.77% (456) | dihydrolipoamide dehydrogenase Lpd_1 |
M. avium 104 | MAV_2396 | - | 2e-63 | 34.22% (453) | mercuric reductase |
M. smegmatis MC2 155 | MSMEG_0903 | lpdA | 6e-44 | 27.83% (460) | dihydrolipoamide dehydrogenase |
M. thermoresistible (build 8) | TH_3945 | - | 3e-62 | 34.09% (443) | PUTATIVE pyridine nucleotide-disulphide oxidoreductase |
M. ulcerans Agy99 | MUL_2214 | lpd | 1e-42 | 28.29% (463) | dihydrolipoamide dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_3468 | - | 7e-66 | 35.53% (456) | mercuric reductase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3101|M.marinum_M -MTQHYDAIVVGAGQAGPPLVGRLTAAGERVAIVERKHVGGTCVNSGCIP MAV_2396|M.avium_104 -MTKHFDAIIVGAGQAGPPLAGRLTAAGQRVAIIERKLIGGTCVNTGCIP Mvan_3468|M.vanbaalenii_PYR-1 MSAQHFDAIIVGAGQAGPPLAGRLTAAGQTVAVIERKLVGGTCVNYGCIP TH_3945|M.thermoresistible__bu --------MIIGAGQAGPPLAGRLADAGQRVVLIERRLIGGTCVNYGCIP MAB_3014|M.abscessus_ATCC_1997 -MSTHFDAVVVGAGQAGPSLAARLRGAGLTVAIVERHLFGGTCVNTGCRP Mflv_3213|M.gilvum_PYR-GCK -MSQGLDLAVIGSGGAAMAAAIRATALGKSVVMIERGIFGGTCVNTGCVP Mb0471|M.bovis_AF2122/97 --MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVGCIP Rv0462|M.tuberculosis_H37Rv --MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVGCIP MUL_2214|M.ulcerans_Agy99 --MTHYDVVVLGAGPAGYVAAIRAAQLGLNTAIVEPKYWGGVCLNVGCIP MSMEG_0903|M.smegmatis_MC2_155 --MTHFDVVVLGAGPGGYVAAIRAAQLGLNTAIVEPKYWGGVCLNVGCIP MLBr_02387|M.leprae_Br4923 --MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAVVEPKYWGGICLNVGCIP ::*:* .. . * * ..::* ** *:* ** * MMAR_3101|M.marinum_M TKTLVASAHAAQLARRGAEYGVGT-GPISVDMAKVKARKDGIMLADRKGV MAV_2396|M.avium_104 TKTLVASAHAAHLARRGADYGVGT-GAISVDMAKVKARKDEIMLGDRKGV Mvan_3468|M.vanbaalenii_PYR-1 TKTLVASAHAAHLARRGNDFGVAA-AGVTVDMAAVKARKDRISVGDREGL TH_3945|M.thermoresistible__bu TKTLVASAHAAHLARRAADYGVRT-GPVTVDMARVKARKDAIMLDDRRGL MAB_3014|M.abscessus_ATCC_1997 TKALVASAHAAHMAREAARWGVVVDGSVSMDMVRVRERKDAVILPSRNGG Mflv_3213|M.gilvum_PYR-GCK SKALIAAAEARHTAADTARFPGIATTAGPVDMAALIAGTHDLVESLRSEK Mb0471|M.bovis_AF2122/97 SKALLRNAELVHIFTKDAKAFGIS-GEVTFDYGIAYDRSRKVAEG-RVAG Rv0462|M.tuberculosis_H37Rv SKALLRNAELVHIFTKDAKAFGIS-GEVTFDYGIAYDRSRKVAEG-RVAG MUL_2214|M.ulcerans_Agy99 SKALLRNAELAHIFTKDAKAFGIS-GEATFDYGVAFDRSRKVAEG-RVAG MSMEG_0903|M.smegmatis_MC2_155 SKALLRNAEIAHMFNKEAKTFGIS-GEATFDYGAAFDRSRKVADG-RVAG MLBr_02387|M.leprae_Br4923 SKVLLHNAELAHIFTKEAKTFGIS-GDASFDYGIAYDRSRKVSEG-RVAG :*.*: *. : ..* . : * MMAR_3101|M.marinum_M EDWLDGMNGCTVFRGHARFEDP---HTLRVGDDLLSADR-------IFLN MAV_2396|M.avium_104 EDWLAGMAGCTVVRGHARFRDP---HTLQVGEDLLRAER-------IFLN Mvan_3468|M.vanbaalenii_PYR-1 ESWLAGMKGCTLIRGHARFENP---HTLRVDDQLLEADR-------IFLN TH_3945|M.thermoresistible__bu ESWLQGMDGCTVVRGHARFEDP---HTVRVGERLLSADR-------IFLN MAB_3014|M.abscessus_ATCC_1997 QTWLKDLG-CAIYHEHASFLSP---TELSVGDEIISAER-------IFLN Mflv_3213|M.gilvum_PYR-GCK YLNVAESYGWQRIQGQARFAGTPDAPVIEVGDATIEAEH-------YLIA Mb0471|M.bovis_AF2122/97 VHFLMKKNKITEIHGYGTFADA---NTLLVDLNDGGTES---VTFDNAII Rv0462|M.tuberculosis_H37Rv VHFLMKKNKITEIHGYGTFADA---NTLLVDLNDGGTES---VTFDNAII MUL_2214|M.ulcerans_Agy99 VHFLMKKNKITEIHGYGKFTDA---NTLSVDLNDGGTEK---VTFDNAII MSMEG_0903|M.smegmatis_MC2_155 VHFLMKKNKITEIHGYGKFTGP---NSLEVALNDGGTEK---VEFSNAII MLBr_02387|M.leprae_Br4923 VHFLMKKNKITEIHGYGRFTDA---NTLSVELSEGVPETPLKVTFNNVII : : . * .. : * .: : MMAR_3101|M.marinum_M VGGRAVAPNIPGLADIDFLTNVSILELDTLPEHLVIVGGSYIALEFAQMY MAV_2396|M.avium_104 VGGRAVVPDIPGLAEVDFLTNVSILELDRLPTHLVIVGGSYIALEFAQMY Mvan_3468|M.vanbaalenii_PYR-1 VGGRAVAPDMPGLADVDYLTNVGILDLDEVPEHLVVIGGSYIALEFAQMY TH_3945|M.thermoresistible__bu VGGRAVVPDLPGLADVDHLTNVSMLELDTLPEHLVIVGGGYIALEFAQMY MAB_3014|M.abscessus_ATCC_1997 VGGRAVVPDWPGVDDVPLFTNSSLIEYDGIPEHLVVIGGSYVGLEFAQIY Mflv_3213|M.gilvum_PYR-GCK TGANPVIP--PAFEGVAYLTSTTAMEVTEVPESLLVIGGGYVALEQAQLF Mb0471|M.bovis_AF2122/97 ATGSSTRLVPGTSLSANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVL Rv0462|M.tuberculosis_H37Rv ATGSSTRLVPGTSLSANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVL MUL_2214|M.ulcerans_Agy99 ATGSSTRLVPGTSLSTNVVTYEEQILTRELPKSIIIAGAGAIGMEFGYVL MSMEG_0903|M.smegmatis_MC2_155 ATGSSTRLVPGTSLSENVVTYETQILSRELPGSIIIAGAGAIGMEFAYVL MLBr_02387|M.leprae_Br4923 ATGSKTRLVPGTLLSTNVITYEEQILTRELPDSIVIVGAGAIGIEFGYVL . . . .* : :* ::: *.. :.:* . : MMAR_3101|M.marinum_M RRFGAPVTVVERGPRLASREDEDVSATIREILEAEGINVVVGADDVRITK MAV_2396|M.avium_104 RRFGAAVTVVERGPRLASREDEDVSAAVQEILRAEGIDIVVNADDVRIAK Mvan_3468|M.vanbaalenii_PYR-1 RRFGAAVTVIERGPRLTAREDEDVSAAIKEILEAEGIDVVVGADAISFAK TH_3945|M.thermoresistible__bu RRFGARVTVVQRGSRLASHEDADVSAAIHDILAGEGIDIVVDASAIRFAR MAB_3014|M.abscessus_ATCC_1997 RRFGSQVTVVHRGPRLVEREDPDASAIIQEVLEREGITFRLNASCINLAR Mflv_3213|M.gilvum_PYR-GCK ARLGSTVTVLVR-STLASKEEPEVGMALLEVFADDGIRVVRRATVSEVEQ Mb0471|M.bovis_AF2122/97 KNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIAD Rv0462|M.tuberculosis_H37Rv KNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIAD MUL_2214|M.ulcerans_Agy99 KNYGVDVTIVEFLPRALPNEDAEVSKEIERQFKKLGVKIRTGTKVESISD MSMEG_0903|M.smegmatis_MC2_155 KNYGVDVTIVEFLPRALPNEDAEVSKEIEKQYKKLGVKILTGTKVEGIAD MLBr_02387|M.leprae_Br4923 KNYGVDVTIVEFLPRAMPNEDAEVSKEIEKQFKKMGIKILTGTKVESISD . * **:: . .*: :.. : *: . : . MMAR_3101|M.marinum_M RDSSVGGFELTPCAGAAPIAGSHLLLAVGRRPNTDDLGLEAAGVQTDARG MAV_2396|M.avium_104 TGN---GFELTSRDGAPPIRGSHLLLAVGRRPNTDDLDLAVAGVRTDARG Mvan_3468|M.vanbaalenii_PYR-1 QAD---GFTVTPRAGAEPIGGSHLLVAVGRRPNTDDLNLEAAGVQTDSRG TH_3945|M.thermoresistible__bu CDG---GVAVTPADGAEPVVGSHLLIAVGRRPNTDDLALDRAGVAVDERG MAB_3014|M.abscessus_ATCC_1997 HDEG-VAVGVDCTDGAPKVVGSHVLVAVGRRPNTDDLGLENAGVATDARG Mflv_3213|M.gilvum_PYR-GCK ADDQ-VTVTATITGGTQQFRAAKVLVATGRRPNTDGLNLEAVQVKTGENN Mb0471|M.bovis_AF2122/97 GGSQ-VTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRK Rv0462|M.tuberculosis_H37Rv GGSQ-VTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRK MUL_2214|M.ulcerans_Agy99 DGSA-VTVVVSKGGKSEELKADKVLQAIGFAPNVEGYGLDKAGVALTDRK MSMEG_0903|M.smegmatis_MC2_155 DGST-VKVTVSKDGKTEELKADKVLQAIGFAPNVEGYGLEAAGVELTDRK MLBr_02387|M.leprae_Br4923 NGSH-VLVAVSKDGQFQELKADKVLQAIGFAPNVDGYGLDKVGVALTADK . . . ::* * * **.:. * . * MMAR_3101|M.marinum_M YIVVDDQLKTSVDHIWAMGDCNGKGAFTHTSYNDFEIVAANLLDDDPRRV MAV_2396|M.avium_104 YILVDDQLKTNVEHIWAMGDCNGRGAFTHTSYNDFEIVAANLLDDDPRRV Mvan_3468|M.vanbaalenii_PYR-1 YIVVDDQLRTSADNIWAMGDCNGRGAFTHTSYNDFEIVAANLLDDDPRRV TH_3945|M.thermoresistible__bu HIVVDDRLRTTAEHIWAMGDCNGRGAFTHTAYNDFEIVAANLLDADPRGV MAB_3014|M.abscessus_ATCC_1997 YITVDDQLRTSTPGIWALGDCNGRGAFTHTSYNDFEIVAANLLDDDPRRV Mflv_3213|M.gilvum_PYR-GCK EVVVSDGLQSSNPRIWAAGDVTGHREFVYVAAHHGAMVADNIFTDAGRRV Mb0471|M.bovis_AF2122/97 AIGVDDYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTL Rv0462|M.tuberculosis_H37Rv AIGVDDYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTL MUL_2214|M.ulcerans_Agy99 AIGIGEYMQTSVGHIYAIGDVTGQLMLAHVAEAMGVVAAETIAGAETLPL MSMEG_0903|M.smegmatis_MC2_155 AIGIDDYMRTNVGHIYAIGDVTGKLQLAHVAEAMAVVAAETIAGAETLPL MLBr_02387|M.leprae_Br4923 AVDIDDYMQTNVSHIYAIGDVTGKLQLAHVAEAQGVVAAEAIAGAETLAL : :.: :::. *:* ** .* :.:.: :.* : : MMAR_3101|M.marinum_M SDR-ITTYALYIDPPLGRAGMSVAQAQATGRKLLVGKRPMTRVGRAVEKG MAV_2396|M.avium_104 SDR-ITTYALYIDPPLGRAGMTVAQVRASGRRALVGKRPMTRVGRAVEKG Mvan_3468|M.vanbaalenii_PYR-1 SDR-VTTYALYIDPPLGRAGMTVEEVRRSGRKALVGKRPMTRVGRAVEKG TH_3945|M.thermoresistible__bu GDR-VRAYAMYIDPPLGRAGMTEDEVRASGRKALLAKRPMSRVGRAVEKG MAB_3014|M.abscessus_ATCC_1997 TDR-LPCYALYTDPPLGRVGMTEAQARASGRSLLVGRKPMSHVGRALEKG Mflv_3213|M.gilvum_PYR-GCK DYR-HLPRVTFTSPAVGAAGTTEAELLAAGTRCDCRVLPLKHVPRAVVNR Mb0471|M.bovis_AF2122/97 GDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVG Rv0462|M.tuberculosis_H37Rv GDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVG MUL_2214|M.ulcerans_Agy99 GDYRMLPRATFCQPQVASFGLTEQQARDEGYDVKVAKFPFTANGKAHGLG MSMEG_0903|M.smegmatis_MC2_155 GDYRMMPRATFCQPQVASFGLTEEQARDEGYDVKVAKFPFTANGKAHGLA MLBr_02387|M.leprae_Br4923 SDYRMMPRATFCQPNVASFGLTEQQARDGGYDVVVAKFPFTANAKAHGMG . : .* :. * : : * *:. :* MMAR_3101|M.marinum_M ETQGFMKVVVDADTDEILGATIFGVGGDEAIHAILDVMSAKAPYTTLSRT MAV_2396|M.avium_104 ETQGFMKVVVDADTREILGAAILGVGGDEAIHGILDVMSAKAPYTTLSRT Mvan_3468|M.vanbaalenii_PYR-1 ETQGFMKVVVDAETDEILGAAILGVGGDEVVHLILDVMTAKLPYTAISRT TH_3945|M.thermoresistible__bu ETQGFMKVLVDADTAEILGAAILGVGGDEVVHAIVDVMAARQPYTAISRT MAB_3014|M.abscessus_ATCC_1997 ETDGYMQVLVDADSDLILGATILGVGGDEVVHCLLDTMQYGIPARQLQRT Mflv_3213|M.gilvum_PYR-GCK DTRGFIKLVADAGTGRIHGITAVAKDAGEIAAAAVYILDAAMTVDQVAGS Mb0471|M.bovis_AF2122/97 DPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARN Rv0462|M.tuberculosis_H37Rv DPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARN MUL_2214|M.ulcerans_Agy99 DPSGFVKLVADGKHGELLGGHLVGHDVSELLPELTLAQKWDLTATELARN MSMEG_0903|M.smegmatis_MC2_155 DPTGFVKLIADAKYGELLGGHLIGPDVSELLPELTLAQKWDLTVNELARN MLBr_02387|M.leprae_Br4923 DPSGFVKLVADAKYGELLGGHMIGHNVSELLPELTLAQKWDLTATELVRN :. *:::::.*. : * .. . * . : . MMAR_3101|M.marinum_M MHIHPTVSELVPTMLQEMAPLV-------- MAV_2396|M.avium_104 MHIHPTVSELIPTMLQQMSPLA-------- Mvan_3468|M.vanbaalenii_PYR-1 MHIHPTVSELIPTVLQELKPLA-------- TH_3945|M.thermoresistible__bu MHIHPTVSELLPTLLQDLQPLR-------- MAB_3014|M.abscessus_ATCC_1997 VHIHPTVAEFLPTILGELQPLI-------- Mflv_3213|M.gilvum_PYR-GCK WAPYLTMAEGIKIAAQSFSADMSRLSCCAS Mb0471|M.bovis_AF2122/97 VHTHPTMSEALQECFHGLVGHMINF----- Rv0462|M.tuberculosis_H37Rv VHTHPTMSEALQECFHGLVGHMINF----- MUL_2214|M.ulcerans_Agy99 VHTHPTMSEALQECFHGLAGHMINF----- MSMEG_0903|M.smegmatis_MC2_155 VHTHPTLSEALQECFHGLAGHMINF----- MLBr_02387|M.leprae_Br4923 VHTHPTLSEALQECFHGLIGHMINF----- : *::* : :