For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLAGRRKVVALSVISAVAVLVTASQTSALKSRLTNTVVAPGALEVEQTPQAAPEPPVIEILPRTGASDVV PVGAVKVTATVGTLTDVRMQNEQGRVVAGRLVEGGRAWEPAEPLGYGRSYSLSATGRGADASTVTTVSEF STVAPQSQVGVRLGMTNGASLSEGGVYGVGTVIVATFDADIPDRAAAESRLQVITTPQLAGSWMWINDRK AHWRPREYFPSGTEVTVKADLYGTDLGSGLFGEQDKQVSFRIGPSRVAIADDTTKQVSVYENGKLIRTMP TSMGRGGTQTVGGKTIAFWTQPGVYTVMEKQNPVLMDSSTYGLPVDSASGYKISVPHAVRISPDGIYLHE REATVWAQGNTNVSAGCLNLSAEDAEWYYNFANPGDVVEIRNTGGAPLEQWQNGDWSVPWDEWMGGSALR P
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2800 | - | - | 100% (421) | ErfK/YbiS/YcfS/YnhG family protein |
M. gilvum PYR-GCK | Mflv_2542 | - | 4e-77 | 39.90% (381) | ErfK/YbiS/YcfS/YnhG family protein |
M. gilvum PYR-GCK | Mflv_0904 | - | 2e-72 | 36.67% (409) | ErfK/YbiS/YcfS/YnhG family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2547c | lppS | 2e-75 | 37.95% (419) | lipoprotein LppS |
M. tuberculosis H37Rv | Rv2518c | lppS | 2e-75 | 37.95% (419) | lipoprotein LppS |
M. leprae Br4923 | MLBr_00426 | lppS | 1e-69 | 37.10% (372) | putative secreted protein |
M. abscessus ATCC 19977 | MAB_1530 | - | 4e-72 | 36.54% (416) | lipoprotein LppS |
M. marinum M | MMAR_3872 | lppS | 1e-75 | 37.35% (415) | lipoprotein LppS |
M. avium 104 | MAV_2751 | - | 1e-119 | 54.01% (374) | ErfK/YbiS/YcfS/YnhG family protein |
M. smegmatis MC2 155 | MSMEG_1322 | - | 1e-133 | 53.90% (423) | ErfK/YbiS/YcfS/YnhG family protein |
M. thermoresistible (build 8) | TH_1098 | lppS | 8e-74 | 40.71% (366) | PROBABLE CONSERVED LIPOPROTEIN LPPS |
M. ulcerans Agy99 | MUL_3804 | lppS | 1e-75 | 37.35% (415) | lipoprotein LppS |
M. vanbaalenii PYR-1 | Mvan_3723 | - | 0.0 | 92.64% (421) | ErfK/YbiS/YcfS/YnhG family protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3872|M.marinum_M ---MAPL----------SRR------RSWLAAILIPVAVLAVACGGSSAT MUL_3804|M.ulcerans_Agy99 --MMAPL----------SRR------RSWLAAILIPVAVLAVACGGSSAT Mb2547c|M.bovis_AF2122/97 MPKVGIA----------AQAGRTRVRRAWLTALMMTAVMIGAVACGSGRG Rv2518c|M.tuberculosis_H37Rv MPKVGIA----------AQAGRTRVRRAWLTALMMTAVMIGAVACGSGRG MLBr_00426|M.leprae_Br4923 ---MGTA----------TRRVQPKAWRALLTLLVISVVMPG-VACNRGGG TH_1098|M.thermoresistible__bu ---MTRP----------RWRS-----RWWLITGLLSVVVLALSACSGGGA MAB_1530|M.abscessus_ATCC_1997 ---MTQG----------RPRLHAGARRRWVATLALPVVAMAVLAGCAGAT Mflv_2800|M.gilvum_PYR-GCK ---MLAG-----------RRKVVALSVISAVAVLVTASQTSALKSRLTNT Mvan_3723|M.vanbaalenii_PYR-1 ---MLTG-----------RRQVAALSVFSAVAVLVTASQTSALKSRLSNT MAV_2751|M.avium_104 --MASKSSDRLVGRILGVRRPRRFLAAVFVVVAVAGAIQLAEAAPCPHGG MSMEG_1322|M.smegmatis_MC2_155 --MMLSS----------VRR--ACLAAVLAVLAVLGGVVVTALPDCVHEH MMAR_3872|M.marinum_M PTATKVIENKGTPFADLLVPKLTASVTDGAVGVTVDAPVTVSVSDGVLAA MUL_3804|M.ulcerans_Agy99 PTATKVIENKGTPFADLLVPKLTASVTDGAVGVTVDAPVTVSVSDGVLAA Mb2547c|M.bovis_AF2122/97 PAPIKVIADKGTPFADLLVPKLTASVTDGAVGVTVDAPVSVTAADGVLAA Rv2518c|M.tuberculosis_H37Rv PAPIKVIADKGTPFADLLVPKLTASVTDGAVGVTVDAPVSVTAADGVLAA MLBr_00426|M.leprae_Br4923 NVPVNVIGDKGTPFADLLVPKLTASVTDGAVGVNVDMPVTVTVADGVLAA TH_1098|M.thermoresistible__bu SDQPKVITDKGTPYGDLLVPRVTASVTDKAVGVPVDEPVTVSAENGVLGA MAB_1530|M.abscessus_ATCC_1997 TQEPPKVIDKATPYADLLVPKLAMSVKDGAVGVAVDAPVTVTAGEGVLGS Mflv_2800|M.gilvum_PYR-GCK VVAPGALEVEQTPQAAPEPPVIEILPRTGASDVVPVGAVKVTATVGTLTD Mvan_3723|M.vanbaalenii_PYR-1 VTAPGAVEVEQTPQAAPKPPVIEILPRTGASDVVPVGAVKVTATVGTLTD MAV_2751|M.avium_104 CP-------GGAAPKTTGPARVRITPGPGARNVDPIAPVLVKAETGTLAG MSMEG_1322|M.smegmatis_MC2_155 CQTMAAAPQGVPQPSPTEPAKLTITPKNNAEDVEPLAPVAVTAVTGTVTS . . : * .* .* *.. *.: MMAR_3872|M.marinum_M VTMVNESGKSISGKLSSDGLHWSTDEPLGYNRRYTLNAKALGLGGAATRQ MUL_3804|M.ulcerans_Agy99 VTMVNESGKSISGKLSFDGLHWSTDEPLGYNRRYTLNAKALGLGGAATRQ Mb2547c|M.bovis_AF2122/97 VTMVNDNGRPVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGLGGAATRQ Rv2518c|M.tuberculosis_H37Rv VTMVNDNGRPVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGLGGAATRQ MLBr_00426|M.leprae_Br4923 VTMINDNGRMINGQFSPDGLRWSTTEPLGFNRCYTLSAKALGLGGVVNRQ TH_1098|M.thermoresistible__bu VTMVNEQGRTVEGEFSEDGVSWSTTEPLGYNRQYTITAQSLGLGGVTTRE MAB_1530|M.abscessus_ATCC_1997 VTMVNSDGKEIAGEIGPDGVTWTTTEPLGYDKQYTINADARGLGGVARAN Mflv_2800|M.gilvum_PYR-GCK VRMQNEQGRVVAGRLVEGGRAWEPAEPLGYGRSYSLSATGRGADASTVTT Mvan_3723|M.vanbaalenii_PYR-1 VRMQNEQGRVVAGRMVGGGRAWEPAEPLGYGRSYKLSATGRGADARTVTS MAV_2751|M.avium_104 VEMVNEGGTAVQGVMTPDNLVWKPTVALGYGRNYTLTITSRGTDGVETKQ MSMEG_1322|M.smegmatis_MC2_155 VRMLNDAGKEIAGALSPDGKVWKPATALGYGRTYTMNVVARGPGGMPTRA * * *. * : * : .. * . **:.: *.:. . * .. MMAR_3872|M.marinum_M M-TFQTSSPAHLTMPYVSPA------DGEVVGVGEPVAIRFDENIANRLA MUL_3804|M.ulcerans_Agy99 M-TFQTSSPAHLTMPYVSPA------DGEVVGVGEPVAIRFDENIANRLA Mb2547c|M.bovis_AF2122/97 L-TFQTSSPAHLTMPYVMPG------DGEVVGVGEPVAIRFDENIADRGA Rv2518c|M.tuberculosis_H37Rv L-TFQTSSPAHLTMPYVMPG------DGEVVGVGEPVAIRFDENIADRGA MLBr_00426|M.leprae_Br4923 M-TFQTSSPAHLTMPYVNPG------NGEIVGIGEPVAIRFDENIANRLA TH_1098|M.thermoresistible__bu M-TFETHSPANLTMPYVVPS------PGEVVGVGQPVAVRFDENIPNRAA MAB_1530|M.abscessus_ATCC_1997 A-TFRTQSPDNMTMPYVMPG------DGEVVGVGQTVAIRFDENIPNRAA Mflv_2800|M.gilvum_PYR-GCK VSEFSTVAPQSQVGVRLGMTNGASLSEGGVYGVGTVIVATFDADIPDRAA Mvan_3723|M.vanbaalenii_PYR-1 VSEFSTVAPQSQVGVRLGMTNGASLSEGAVYGVGTVIVATFEADIPDRAA MAV_2751|M.avium_104 VSTFSTLRPSNQTKVSFTTTSESPLRDGASYGVGTVIVAHFDEQIADRAA MSMEG_1322|M.smegmatis_MC2_155 SSTFTTVTPTYQANVYLNGTSGAPLKDGETYGVGMVIVARFDQAITDKAS * * * . . * *:* :. *: *.:: : MMAR_3872|M.marinum_M AEKAIKITTKPAVEGAFYWLNNREVRWRPEHFWKSGTSVDVAVNTYGVDL MUL_3804|M.ulcerans_Agy99 AEKAIKITTKPAVEGAFYWLNNREVRWRPEHFWKSGTSVDVAVNTYGVDL Mb2547c|M.bovis_AF2122/97 AEKAIKITTNPPVEGAFYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDL Rv2518c|M.tuberculosis_H37Rv AEKAIKITTNPPVEGAFYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDL MLBr_00426|M.leprae_Br4923 AQKAITITANPPVEGAFYWLNNREVRWRPEHFWKSGTAVDVAVNTYGVDL TH_1098|M.thermoresistible__bu AERAIKVTTNPPVEGAFYWLNNREVRWRPASYWKPGTTVEVEVNTYGVDL MAB_1530|M.abscessus_ATCC_1997 AEKAIKITTNPPVEGAFYWLNNREVRWRPESFWDSGTSVDVKVNTYGVNL Mflv_2800|M.gilvum_PYR-GCK AESRLQVITTPQLAGSWMWINDRKAHWRPREYFPSGTEVTVKADLYGTDL Mvan_3723|M.vanbaalenii_PYR-1 AESRLQVKTSPHVAGSWMWVNDRKAHWRPREYFRSGTEVTVKADLYGTDL MAV_2751|M.avium_104 AERHLTVTTNPKVTGSWFWVDGQNAHWRPEHYYAPGTTVTAEAKIYGIAL MSMEG_1322|M.smegmatis_MC2_155 AERRMKVTTSPKAVGSWNWIDDQTAHWRPREYYAPGTKVTVDADIYGARL *: : : :.* *:: *::.: .:*** :: .** * . .. ** * MMAR_3872|M.marinum_M GEGMFGEDNVKTHFTIGDEVIATADDNTKMLTIRVNGEVVKTMPTSMGKD MUL_3804|M.ulcerans_Agy99 GEGMFGEDNVKTHFTIGDEVIATADDNTKMLTILVNGEVVKTMPTSMGKD Mb2547c|M.bovis_AF2122/97 GEGMFGEDNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKD Rv2518c|M.tuberculosis_H37Rv GEGMFGEDNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKD MLBr_00426|M.leprae_Br4923 GEGMFGEDNVKTHFTIGDEVFATADDATKMLTVRVNGEVVKIMPTSMGKD TH_1098|M.thermoresistible__bu GDGLFGQRNTKTHFTIGDEVISTVDDNTKTLTVRRNGEVVKTMPVSMGKD MAB_1530|M.abscessus_ATCC_1997 GDGVFGQDNVASHFTIGDAVISRVDDTNKILNIERNGEIIKTMPTSMGKD Mflv_2800|M.gilvum_PYR-GCK GSGLFGEQDKQVSFRIGPSRVAIADDTTKQVSVYENGKLIRTMPTSMGRG Mvan_3723|M.vanbaalenii_PYR-1 GGGLFGEQDKQVSFRIGPSRVAVADDTTKQVSVYENGRLVRTMPTSMGRG MAV_2751|M.avium_104 GDGLFGQDDSRVSFRIGDAHVSIADDATHQVSVFDNGVLVRTMPTSMGMG MSMEG_1322|M.smegmatis_MC2_155 GEDLYGAQDEKVSFVIGDSHVSIADDNTKQVSVYENGKLVRTMPTSMGMG * .::* : * ** .: .** .: :.: ** ::: **.*** . MMAR_3872|M.marinum_M STPTANG----------IYIVGARFKHIIMDSSTYGVPVNSPNGYRTDVN MUL_3804|M.ulcerans_Agy99 STPTANG----------IYIVGARFKHIIMDSSTYGVPVNSPNGYRTDVN Mb2547c|M.bovis_AF2122/97 STPTANG----------IYIVGSRYKHIIMDSSTYGVPVNSPNGYRTDVD Rv2518c|M.tuberculosis_H37Rv STPTANG----------IYIVGSRYKHIIMDSSTYGVPVNSPNGYRTDVD MLBr_00426|M.leprae_Br4923 STPTANG----------IYIVGARFKHIIMDSSTYGVPVNSPNGYRADVD TH_1098|M.thermoresistible__bu STPTNNG----------VYIVGDKRAHMVMDSSTYGVPVNSPNGYRTEVD MAB_1530|M.abscessus_ATCC_1997 KAPTNNG----------TYIIGERFKDLIMDSSTYGVAVNSPDGYRTKVQ Mflv_2800|M.gilvum_PYR-GCK GTQTVGGKTIAFWTQPGVYTVMEKQNPVLMDSSTYGLPVDSASGYKISVP Mvan_3723|M.vanbaalenii_PYR-1 GTQTVGGKTIAFWTQPGVYTVMEKQNPVLMDSSTYGLPVDSASGYKISVP MAV_2751|M.avium_104 GTENIGGRSISLWTPPGVYTVLDKGNPVVMDSSTFGLPKNSRLGYRETIN MSMEG_1322|M.smegmatis_MC2_155 GTETVNGVTLSFWTPRGIYTVMDKANPVVMDSSTYGLPVGSRLGYRTTIP : . .* * : : ::*****:*:. .* **: : MMAR_3872|M.marinum_M WATQLSYSGVYVHSAPWSVGAQGHTNTSHGCLNVSPSNAEWFYDHIKTGD MUL_3804|M.ulcerans_Agy99 WATQLSYSGVYVHSAPWSVGAQGHTNTSHGCLNVSPSNAEWFYDHIKTGD Mb2547c|M.bovis_AF2122/97 WATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGD Rv2518c|M.tuberculosis_H37Rv WATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGD MLBr_00426|M.leprae_Br4923 WATQLSYSGVFLHSAPWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGD TH_1098|M.thermoresistible__bu WAVQMSYSGIYVHSAPWSVGSQGYSNVSHGCINVSPSNAKWFYENSKRGD MAB_1530|M.abscessus_ATCC_1997 YATQMSYSGIYVHAAPWSVGAQGRTNTSHGCLNVSTANAKWFYENTKRGD Mflv_2800|M.gilvum_PYR-GCK HAVRISPDGIYLHEREATVWAQGNTNVSAGCLNLSAEDAEWYYNFANPGD Mvan_3723|M.vanbaalenii_PYR-1 HAVRISPDGIYLHEREATVSAQGNTNVSAGCLNLSAENAEWYYEFANPGD MAV_2751|M.avium_104 YATKISSDGIYLHELDATVWAQGHQDTSHGCLNLNADNAKWFYDFSVPGD MSMEG_1322|M.smegmatis_MC2_155 YATRISVDGIYLHQLNDTIWAQGNTNVSHGCLNLSGENAQWFYNFSRPGD *.::* .*:::* :: :** :.* **:*:. :*:*:*: ** MMAR_3872|M.marinum_M IVEVVNTVGGTLPGTEGLGDWNIPWEQWRAGNANA-- MUL_3804|M.ulcerans_Agy99 IVEVVNTVGGTLPGTEGLGDWNIPWEQWRAGNANA-- Mb2547c|M.bovis_AF2122/97 IVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA-- Rv2518c|M.tuberculosis_H37Rv IVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA-- MLBr_00426|M.leprae_Br4923 IVEVVNTVGDTLPGAEGLGDWNIPWEQWKAGNANI-- TH_1098|M.thermoresistible__bu IIEVVNTVGTVLPGTDGLGDWNIPWEQWKAGNANV-- MAB_1530|M.abscessus_ATCC_1997 VVIVSNTVGPVLPGTEGLGDWNIPWAQWKAGNARQQ- Mflv_2800|M.gilvum_PYR-GCK VVEIRNTGGAPLE-QWQNGDWSVPWDEWMGGSALRP- Mvan_3723|M.vanbaalenii_PYR-1 VVEVRNTGGAPLE-QWQNGDWSVPWDEWVNGSALRP- MAV_2751|M.avium_104 VVEVRNSGGPPLT-LAQNGDWTLSWDQWRRGSALKPT MSMEG_1322|M.smegmatis_MC2_155 IVEIRNTGGEPLK-PDNNGDWTIPWEQWRKGSALN-- :: : *: * * ***.:.* :* *.*