For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_3872 (lppS)

annotation: lipoprotein LppS
coordinates: 4810855 - 4812054
length: 399

APLSRRRSWLAAILIPVAVLAVACGGSSATPTATKVIENKGTPFADLLVPKLTASVTDGAVGVTVDAPVT
VSVSDGVLAAVTMVNESGKSISGKLSSDGLHWSTDEPLGYNRRYTLNAKALGLGGAATRQMTFQTSSPAH
LTMPYVSPADGEVVGVGEPVAIRFDENIANRLAAEKAIKITTKPAVEGAFYWLNNREVRWRPEHFWKSGT
SVDVAVNTYGVDLGEGMFGEDNVKTHFTIGDEVIATADDNTKMLTIRVNGEVVKTMPTSMGKDSTPTANG
IYIVGARFKHIIMDSSTYGVPVNSPNGYRTDVNWATQLSYSGVYVHSAPWSVGAQGHTNTSHGCLNVSPS
NAEWFYDHIKTGDIVEVVNTVGGTLPGTEGLGDWNIPWEQWRAGNANA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_3872lppS-100% (399)lipoprotein LppS
M. marinum MMMAR_0435-3e-5644.22% (251) secretory protein
M. marinum MMMAR_0809lprQ3e-5131.20% (407) lipoprotein LprQ

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2547clppS0.083.72% (393) lipoprotein LppS
M. gilvum PYR-GCKMflv_2542-1e-16970.95% (389) ErfK/YbiS/YcfS/YnhG family protein
M. tuberculosis H37RvRv2518clppS0.083.72% (393) lipoprotein LppS
M. leprae Br4923MLBr_00426lppS0.082.40% (392) putative secreted protein
M. abscessus ATCC 19977MAB_1530-1e-16468.54% (391) lipoprotein LppS
M. avium 104MAV_1661-0.087.53% (377) ErfK/YbiS/YcfS/YnhG family protein
M. smegmatis MC2 155MSMEG_4745-1e-16266.08% (395) ErfK/YbiS/YcfS/YnhG family protein
M. thermoresistible (build 8)TH_1098lppS1e-17571.79% (397) PROBABLE CONSERVED LIPOPROTEIN LPPS
M. ulcerans Agy99MUL_3804lppS0.099.50% (399) lipoprotein LppS
M. vanbaalenii PYR-1Mvan_4102-1e-17270.81% (394) ErfK/YbiS/YcfS/YnhG family protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2542|M.gilvum_PYR-GCK          MGWVESAGRARWRT--SGAVAAALVGAMVFGLTGCG-GSTEAPTPQVISD
Mvan_4102|M.vanbaalenii_PYR-1       MWQVNTATRARRRR--SWLTVAVLVPAIALGLTACG-DNAEPPQAQVITD
MSMEG_4745|M.smegmatis_MC2_155      ------MIRPRRSL--FRSAVVAMVPALLFGLMACG-KDEQDGPAPVIAD
TH_1098|M.thermoresistible__bu      ------MTRPRWRS--RWWLITGLLSVVVLALSACS-GGGASDQPKVITD
MMAR_3872|M.marinum_M               ---MAPLSRR------RSWLAAILIPVAVL-AVACGGSSATPTATKVIEN
MUL_3804|M.ulcerans_Agy99           --MMAPLSRR------RSWLAAILIPVAVL-AVACGGSSATPTATKVIEN
MLBr_00426|M.leprae_Br4923          ---MGTATRRVQPKAWRALLTLLVISVVMP-GVACN-RGGGNVPVNVIGD
MAV_1661|M.avium_104                ----------------------------MG-AVACG-GGHTAAPPKVIFD
Mb2547c|M.bovis_AF2122/97           MPKVGIAAQAGRTRVRRAWLTALMMTAVMIGAVACG-SGRGPAPIKVIAD
Rv2518c|M.tuberculosis_H37Rv        MPKVGIAAQAGRTRVRRAWLTALMMTAVMIGAVACG-SGRGPAPIKVIAD
MAB_1530|M.abscessus_ATCC_1997      ----MTQGRPRLHAGARRRWVATLALPVVAMAVLAGCAGATTQEPPKVID
                                                                      ..  .        : :

Mflv_2542|M.gilvum_PYR-GCK          KGTPFGDLLVPKLNASVQDGAVGVSAGSPVTVSAEDGVLGAVSMVNENGK
Mvan_4102|M.vanbaalenii_PYR-1       KGTPFGDLLVPKLTASVQDGAVGVSVDSPVTVSADYGVLGAVTMVNEDGE
MSMEG_4745|M.smegmatis_MC2_155      KGTPFGDLLVPRVNASVTDGAVGVTVESPVTVTAENGVLGGVSMTDESGS
TH_1098|M.thermoresistible__bu      KGTPYGDLLVPRVTASVTDKAVGVPVDEPVTVSAENGVLGAVTMVNEQGR
MMAR_3872|M.marinum_M               KGTPFADLLVPKLTASVTDGAVGVTVDAPVTVSVSDGVLAAVTMVNESGK
MUL_3804|M.ulcerans_Agy99           KGTPFADLLVPKLTASVTDGAVGVTVDAPVTVSVSDGVLAAVTMVNESGK
MLBr_00426|M.leprae_Br4923          KGTPFADLLVPKLTASVTDGAVGVNVDMPVTVTVADGVLAAVTMINDNGR
MAV_1661|M.avium_104                KGTPFADLLVPKLTASVSDGAVGVTVDAPVTVSVADGVLASVTMVNENGR
Mb2547c|M.bovis_AF2122/97           KGTPFADLLVPKLTASVTDGAVGVTVDAPVSVTAADGVLAAVTMVNDNGR
Rv2518c|M.tuberculosis_H37Rv        KGTPFADLLVPKLTASVTDGAVGVTVDAPVSVTAADGVLAAVTMVNDNGR
MAB_1530|M.abscessus_ATCC_1997      KATPYADLLVPKLAMSVKDGAVGVAVDAPVTVTAGEGVLGSVTMVNSDGK
                                    *.**:.*****::  ** * **** .  **:*:.  ***..*:* :..* 

Mflv_2542|M.gilvum_PYR-GCK          AVEGELTEDGLTWETAEPLGYNKRYTLTAQALGLGGVTSRQMTFETHSPE
Mvan_4102|M.vanbaalenii_PYR-1       PVAGQLSEDGLTWETAEPLGYNKSYTLTAQSLGLGGVTSSQMTFETHSPE
MSMEG_4745|M.smegmatis_MC2_155      PVAGTLSPDGLTWSTTDPLDYNEQYTLVAQSLGLGGVTNRRIQFETHSPQ
TH_1098|M.thermoresistible__bu      TVEGEFSEDGVSWSTTEPLGYNRQYTITAQSLGLGGVTTREMTFETHSPA
MMAR_3872|M.marinum_M               SISGKLSSDGLHWSTDEPLGYNRRYTLNAKALGLGGAATRQMTFQTSSPA
MUL_3804|M.ulcerans_Agy99           SISGKLSFDGLHWSTDEPLGYNRRYTLNAKALGLGGAATRQMTFQTSSPA
MLBr_00426|M.leprae_Br4923          MINGQFSPDGLRWSTTEPLGFNRCYTLSAKALGLGGVVNRQMTFQTSSPA
MAV_1661|M.avium_104                SISGQLSPDGLRWSTTEQLGYNRRYTLTAKATGLGGAASKQMTFETSSPA
Mb2547c|M.bovis_AF2122/97           PVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGLGGAATRQLTFQTSSPA
Rv2518c|M.tuberculosis_H37Rv        PVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGLGGAATRQLTFQTSSPA
MAB_1530|M.abscessus_ATCC_1997      EIAGEIGPDGVTWTTTEPLGYDKQYTINADARGLGGVARANATFRTQSPD
                                     : * :  **: * * : *.::. **: * : ****..  .  *.* ** 

Mflv_2542|M.gilvum_PYR-GCK          NLTMPYVLPNDGEVVGVGQPVAIRFDENIPNRLAAQRAITVKTTPEVEGA
Mvan_4102|M.vanbaalenii_PYR-1       NLTMPYVLPNDGEVVGVGQPVAIQFDENIPNRLAAQRAITVKTTPPVEGA
MSMEG_4745|M.smegmatis_MC2_155      NLTMPYVLPNNGEVVGVGQPIAIRFDENISDRVAAQRAITVKTTPPVEGA
TH_1098|M.thermoresistible__bu      NLTMPYVVPSPGEVVGVGQPVAVRFDENIPNRAAAERAIKVTTNPPVEGA
MMAR_3872|M.marinum_M               HLTMPYVSPADGEVVGVGEPVAIRFDENIANRLAAEKAIKITTKPAVEGA
MUL_3804|M.ulcerans_Agy99           HLTMPYVSPADGEVVGVGEPVAIRFDENIANRLAAEKAIKITTKPAVEGA
MLBr_00426|M.leprae_Br4923          HLTMPYVNPGNGEIVGIGEPVAIRFDENIANRLAAQKAITITANPPVEGA
MAV_1661|M.avium_104                HLTMPYVSPADGEVVGVGEPVAIRFDENIANRAAAQKAITITTNPPVEGA
Mb2547c|M.bovis_AF2122/97           HLTMPYVMPGDGEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGA
Rv2518c|M.tuberculosis_H37Rv        HLTMPYVMPGDGEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGA
MAB_1530|M.abscessus_ATCC_1997      NMTMPYVMPGDGEVVGVGQTVAIRFDENIPNRAAAEKAIKITTNPPVEGA
                                    ::***** *  **:**:*:.:*::*****.:* **::**.:.:.* ****

Mflv_2542|M.gilvum_PYR-GCK          FYWLNNREVRWRPAKYWKPGTTVEVEVNTYGVDLGDGLFGQDNVSTSFTI
Mvan_4102|M.vanbaalenii_PYR-1       FYWLNNREVRWRPAKYWKPGTTVEVAVNTYGVDLGDGLFGQDNVKTSFKI
MSMEG_4745|M.smegmatis_MC2_155      FYWLNNREVRWRPAEYWKPGTTVDVQVNTYGVELGDGLYGQDNVETHFKI
TH_1098|M.thermoresistible__bu      FYWLNNREVRWRPASYWKPGTTVEVEVNTYGVDLGDGLFGQRNTKTHFTI
MMAR_3872|M.marinum_M               FYWLNNREVRWRPEHFWKSGTSVDVAVNTYGVDLGEGMFGEDNVKTHFTI
MUL_3804|M.ulcerans_Agy99           FYWLNNREVRWRPEHFWKSGTSVDVAVNTYGVDLGEGMFGEDNVKTHFTI
MLBr_00426|M.leprae_Br4923          FYWLNNREVRWRPEHFWKSGTAVDVAVNTYGVDLGEGMFGEDNVKTHFTI
MAV_1661|M.avium_104                FYWLNNREVRWRPEHFWKSGTVIDVAVNTYGVDLGDGMFGEDNVKTHFTI
Mb2547c|M.bovis_AF2122/97           FYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGEDNVQTHFTI
Rv2518c|M.tuberculosis_H37Rv        FYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGEDNVQTHFTI
MAB_1530|M.abscessus_ATCC_1997      FYWLNNREVRWRPESFWDSGTSVDVKVNTYGVNLGDGVFGQDNVASHFTI
                                    *************  :*..** ::* ******:**:*::*: *. : *.*

Mflv_2542|M.gilvum_PYR-GCK          GDQMVTTVDDSTKTLTVRRNGEVVKTMPVSMGKNSTPTNNGVYIVGDRRS
Mvan_4102|M.vanbaalenii_PYR-1       GDEVITTVDDNTKTLTVRRNGEVIKSMPVSMGKNSTPTNNGVYIVGDRRS
MSMEG_4745|M.smegmatis_MC2_155      GDEVIAVADDNTKTLTVRRNGEVVKTMPISMGKNSTPTNNGVYIIGDRYE
TH_1098|M.thermoresistible__bu      GDEVISTVDDNTKTLTVRRNGEVVKTMPVSMGKDSTPTNNGVYIVGDKRA
MMAR_3872|M.marinum_M               GDEVIATADDNTKMLTIRVNGEVVKTMPTSMGKDSTPTANGIYIVGARFK
MUL_3804|M.ulcerans_Agy99           GDEVIATADDNTKMLTILVNGEVVKTMPTSMGKDSTPTANGIYIVGARFK
MLBr_00426|M.leprae_Br4923          GDEVFATADDATKMLTVRVNGEVVKIMPTSMGKDSTPTANGIYIVGARFK
MAV_1661|M.avium_104                GDEVISTADDTTKTVTVRVNGEVVKTMPTSMGKDSTPTANGIYIVGARFK
Mb2547c|M.bovis_AF2122/97           GDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYIVGSRYK
Rv2518c|M.tuberculosis_H37Rv        GDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYIVGSRYK
MAB_1530|M.abscessus_ATCC_1997      GDAVISRVDDTNKILNIERNGEIIKTMPTSMGKDKAPTNNGTYIIGERFK
                                    ** :.: .** .* :.:  ***::* ** ****:.:** ** **:* :  

Mflv_2542|M.gilvum_PYR-GCK          HMVMDSSTYGVPVNSANGYRTEVDWATQISYSGIYVHAAPWSVGSQGESN
Mvan_4102|M.vanbaalenii_PYR-1       HMVMDSSTYGVPANSPNGYRTEVDWATQISYSGIYVHAAPWSVGSQGYSN
MSMEG_4745|M.smegmatis_MC2_155      HLVMDSSTYGVPVNSPNGYRTEVDYATQMSYSGIYVHGAPWSVGSQGYSN
TH_1098|M.thermoresistible__bu      HMVMDSSTYGVPVNSPNGYRTEVDWAVQMSYSGIYVHSAPWSVGSQGYSN
MMAR_3872|M.marinum_M               HIIMDSSTYGVPVNSPNGYRTDVNWATQLSYSGVYVHSAPWSVGAQGHTN
MUL_3804|M.ulcerans_Agy99           HIIMDSSTYGVPVNSPNGYRTDVNWATQLSYSGVYVHSAPWSVGAQGHTN
MLBr_00426|M.leprae_Br4923          HIIMDSSTYGVPVNSPNGYRADVDWATQLSYSGVFLHSAPWSVGAQGHTN
MAV_1661|M.avium_104                HIIMDSSTYGVPVNSPNGYRTEVDWATQMSYSGVFVHSAPWSVGAQGHTN
Mb2547c|M.bovis_AF2122/97           HIIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTN
Rv2518c|M.tuberculosis_H37Rv        HIIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTN
MAB_1530|M.abscessus_ATCC_1997      DLIMDSSTYGVAVNSPDGYRTKVQYATQMSYSGIYVHAAPWSVGAQGRTN
                                    .::********..**.:***:.*::*.*:****:::*.******:** :*

Mflv_2542|M.gilvum_PYR-GCK          VSHGCINVSTSNGKWFYDNSKRGDIVEIVNTVGSPLPGTDGLGDWNIPWE
Mvan_4102|M.vanbaalenii_PYR-1       VSHGCINVSTSNGQWFYDNSKRGDIVEIVNTVGSPLSGTDGLGDWNIPWD
MSMEG_4745|M.smegmatis_MC2_155      VSHGCLNVSTANARWFYENTKRGDIVEVRNTVGSLLPGTDGLGDWNIPWE
TH_1098|M.thermoresistible__bu      VSHGCINVSPSNAKWFYENSKRGDIIEVVNTVGTVLPGTDGLGDWNIPWE
MMAR_3872|M.marinum_M               TSHGCLNVSPSNAEWFYDHIKTGDIVEVVNTVGGTLPGTEGLGDWNIPWE
MUL_3804|M.ulcerans_Agy99           TSHGCLNVSPSNAEWFYDHIKTGDIVEVVNTVGGTLPGTEGLGDWNIPWE
MLBr_00426|M.leprae_Br4923          TSHGCLNVSPSNAQWFYDHVKRGDIVEVVNTVGDTLPGAEGLGDWNIPWE
MAV_1661|M.avium_104                TSHGCLNVSPSNAEWFYDHSKSGDIVEVVHTVGPTLPGTEGLGDWNIPWS
Mb2547c|M.bovis_AF2122/97           TSHGCLNVSPSNAQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWD
Rv2518c|M.tuberculosis_H37Rv        TSHGCLNVSPSNAQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWD
MAB_1530|M.abscessus_ATCC_1997      TSHGCLNVSTANAKWFYENTKRGDVVIVSNTVGPVLPGTEGLGDWNIPWA
                                    .****:***.:*..***:: * **:: : :***  *.* :********* 

Mflv_2542|M.gilvum_PYR-GCK          QWKAGNANL-
Mvan_4102|M.vanbaalenii_PYR-1       QWKAGNANL-
MSMEG_4745|M.smegmatis_MC2_155      QWRAGNASI-
TH_1098|M.thermoresistible__bu      QWKAGNANV-
MMAR_3872|M.marinum_M               QWRAGNANA-
MUL_3804|M.ulcerans_Agy99           QWRAGNANA-
MLBr_00426|M.leprae_Br4923          QWKAGNANI-
MAV_1661|M.avium_104                QWKAGNANT-
Mb2547c|M.bovis_AF2122/97           QWRAGNAKA-
Rv2518c|M.tuberculosis_H37Rv        QWRAGNAKA-
MAB_1530|M.abscessus_ATCC_1997      QWKAGNARQQ
                                    **:****