For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RIVIAEDSALLRAGIERILTDAGHQVVAGVPDATDLLRLVNDERPDLAILDVRMPPTFTDEGIRAAALLR SQNPESPVLVLSHYVEERYAADLIASDTRGFGYLLKDRVADVPAFLDAVEVVGAGGTVLDPEVVSQILAR SHRRNVLDALTPRENEVLQLMAEGKTNSAIASGLHMSVGSAEKHIASIFTKLGLAPDDTENRRVLAVLRY LES*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_2280 | - | - | 100% (214) | two component LuxR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_0968 | - | 2e-49 | 50.00% (216) | two component LuxR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_0730 | - | 8e-17 | 30.15% (199) | two component LuxR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0867c | narL | 6e-17 | 31.34% (201) | nitrate/nitrite response transcriptional regulatory protein |
| M. tuberculosis H37Rv | Rv0844c | narL | 2e-17 | 31.84% (201) | nitrate/nitrite response transcriptional regulatory protein |
| M. leprae Br4923 | MLBr_01286 | - | 8e-11 | 34.26% (108) | putative two-component response regulatory protein |
| M. abscessus ATCC 19977 | MAB_4498c | - | 1e-48 | 47.17% (212) | two-component LuxR family response regulator |
| M. marinum M | MMAR_4782 | narL | 8e-18 | 31.34% (201) | nitrate/nitrite response regulator protein NarL |
| M. avium 104 | MAV_5280 | - | 5e-17 | 32.00% (200) | two-component system response regulator |
| M. smegmatis MC2 155 | MSMEG_4969 | - | 1e-104 | 88.32% (214) | two-component system response regulator |
| M. thermoresistible (build 8) | TH_1532 | - | 1e-105 | 90.19% (214) | two-component system response regulator |
| M. ulcerans Agy99 | MUL_0351 | narL | 6e-18 | 31.34% (201) | nitrate/nitrite response regulator protein NarL |
| M. vanbaalenii PYR-1 | Mvan_4386 | - | 1e-106 | 94.31% (211) | two component LuxR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0867c|M.bovis_AF2122/97 -----MSNPQPEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAA
Rv0844c|M.tuberculosis_H37Rv -----MSNPQPEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAA
MMAR_4782|M.marinum_M -----MDVTKTEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAA
MUL_0351|M.ulcerans_Agy99 -----MDVTKTEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAA
MAV_5280|M.avium_104 -----MTDPAP-EITVLLVDDQDLVRSGLRRILRRKDGFVIVAECADGDE
Mflv_2280|M.gilvum_PYR-GCK -------------MRIVIAEDSALLRAGIERILTDAG-HQVVAGVPDATD
Mvan_4386|M.vanbaalenii_PYR-1 ----------------MIAEDSALLRAGIERILTDAG-HQVVAGVPDATN
MSMEG_4969|M.smegmatis_MC2_155 -------------MRIVIAEDSALLRAGIERILADAG-HDVIAGVPDATN
TH_1532|M.thermoresistible__bu -------------MRIVIAEDSALLRAGIERILTDAG-HEVVAGVPDATD
MAB_4498c|M.abscessus_ATCC_199 ----------MSAIRVLVADDDTLLREGVASVLEKAG-FEVVGRAGDATA
MLBr_01286|M.leprae_Br4923 MTGPTTDADAATPHRVLIAEDEALIRLDLAEMLRDEG-YDIVGEAADGQE
:: :* *.* .: * . ::. *.
Mb0867c|M.bovis_AF2122/97 ALELIKAHLPDVALLDYRMP---GMDGAQVPAAVRSYELPTRVLLISAHD
Rv0844c|M.tuberculosis_H37Rv ALELIKAHLPDVALLDYRMP---GMDGAQVAAAVRSYELPTRVLLISAHD
MMAR_4782|M.marinum_M ALELIKTHLPDVALLDYRMP---RMDGAQVAAAVRSNELPTRVLLISAHD
MUL_0351|M.ulcerans_Agy99 ALELIETHLPDVALLDYRMP---RMDGAQVAAAVRSNGLPTRVLLISAHD
MAV_5280|M.avium_104 VPAAVAAHRPDVVVMDLRMR---RVDGIEATRRLGGR---PPVLALTTFN
Mflv_2280|M.gilvum_PYR-GCK LLRLVNDERPDLAILDVRMPPTFTDEGIRAAALLRSQNPESPVLVLSHYV
Mvan_4386|M.vanbaalenii_PYR-1 LLRLVNDERPDLAILDVRMPPTFTDEGIRAAALLRSQNPESPVLVLSHYV
MSMEG_4969|M.smegmatis_MC2_155 LLNLVNEHRPDLAILDVRMPPTFTDEGIRAAALLRKQNPESPVLVLSHYV
TH_1532|M.thermoresistible__bu LLRLVNELRPDLAIVDVRMPPTFTDEGIRAAALLRSQNPESPVLVLSHYV
MAB_4498c|M.abscessus_ATCC_199 LLELVRTESPNLVVVDIRMPPTHTTEGLEAAQKIRGEHPGIGVLVLSAHV
MLBr_01286|M.leprae_Br4923 AVELAERHKPDLVIMDVKMP---RRDGIDAASEIASKR-IAPIVVLTAFS
*::.::* :* :* .. : :: :: .
Mb0867c|M.bovis_AF2122/97 EPAIVYQALQQGA--AGFLLKD--STRTEIVKAVLDCAKGRDVVAPSLVG
Rv0844c|M.tuberculosis_H37Rv EPAIVYQALQQGA--AGFLLKD--STRTEIVKAVLDCAKGRDVVAPSLVG
MMAR_4782|M.marinum_M ESAIVYQALQQGA--AGFLLKD--STRTEIVKAVLDCAKGRDVVAPSLVG
MUL_0351|M.ulcerans_Agy99 ESAIVYQALQQGA--AGFLLKD--STRTEIVKAVLDCAKGRDVVAPSLVG
MAV_5280|M.avium_104 EDELLSGALRAGA--AGFVLKD--SSAEELIRAVRAVARGEGYLDPAVTS
Mflv_2280|M.gilvum_PYR-GCK EERYAADLIASDTRGFGYLLKDRVADVPAFLDAVEVVGAGGTVLDPEVVS
Mvan_4386|M.vanbaalenii_PYR-1 EERYAADLIASDTRGFGYLLKDRVADVPAFLDAVEVVGSGGTVLDPEVVS
MSMEG_4969|M.smegmatis_MC2_155 EERYASDLIASDTKGFGYLLKDRVADVPAFLDAVEVVGRGGTVLDPEVVS
TH_1532|M.thermoresistible__bu EERYAADLIASDTKGFGYLLKDRVADVPAFLDAVEVVGGGGTVLDPEVVS
MAB_4498c|M.abscessus_ATCC_199 EVEYAAELITSGD-GVGYLLKSRIGDVGEFADACTRVAGGGSIVDPELVR
MLBr_01286|M.leprae_Br4923 QRDLVERARDAGA--MAYLVKP--FTISDLIPAIALAMSRFSELT-ALER
: . .:::* : * : :
Mb0867c|M.bovis_AF2122/97 GLAGEIRQRAAP----VAPVLSAREREVLNRIACGQSIPAIAAELYVAPS
Rv0844c|M.tuberculosis_H37Rv GLAGEIRQRAAP----VAPVLSAREREVLNRIACGQSIPAIAAELYVAPS
MMAR_4782|M.marinum_M GLAGEIRQRAAP----MAPVLSAREREVLHRIAKGQSIPAIAGELYVAPS
MUL_0351|M.ulcerans_Agy99 GLAGEIRQRAAP----MAPVLSAREREVLHRIAKGQSIPAIAGELYVAPS
MAV_5280|M.avium_104 RVLTTYRKAAPGPHGAAIAELTTRERDVLTLIGKGLSNSEIADELCISGV
Mflv_2280|M.gilvum_PYR-GCK QILARSHRRNVL------DALTPRENEVLQLMAEGKTNSAIASGLHMSVG
Mvan_4386|M.vanbaalenii_PYR-1 QILVRSRRRNAL------DALTPREHEVLQLMAEGKTNSAIAAALHMSVG
MSMEG_4969|M.smegmatis_MC2_155 QILVRSHRRSAL------DQLTPREHDVLQLMAEGKTNSAIASALHISIG
TH_1532|M.thermoresistible__bu QILVRSHRRSAL------DELTAREHDVLRLMAEGKTNSAIAGALHISIG
MAB_4498c|M.abscessus_ATCC_199 ELLSARRKDDPL------SALSQRELEVLELMAQGLSNSGIAGRLWITES
MLBr_01286|M.leprae_Br4923 EVATLADRLETR-------KLVERAKGLLQ-VKQGMTEPEAFKWIQRAAM
: : * * :* : * : . : :
Mb0867c|M.bovis_AF2122/97 TVKTHVQRLYEKLGVSDRAAAVAEAMRQRLLD---
Rv0844c|M.tuberculosis_H37Rv TVKTHVQRLYEKLGVSDRAAAVAEAMRQRLLD---
MMAR_4782|M.marinum_M TVKTHVQRLYEKLGVSDRAAAVAEAMRQGLLD---
MUL_0351|M.ulcerans_Agy99 TVKTHVQRLYEKLGVSDRAAAVAEAMRQGLLD---
MAV_5280|M.avium_104 TVKSHIGRIFGKLDLRDRAAAIVYAYDNGIVAPR-
Mflv_2280|M.gilvum_PYR-GCK SAEKHIASIFTKLGLAPDDTENRRVLAVLRYLES-
Mvan_4386|M.vanbaalenii_PYR-1 SAEKHIASIFTKLDLAPD--ENRRVLAVLRYLDS-
MSMEG_4969|M.smegmatis_MC2_155 SAEKHIASIFTKLDLAPDESENRRVLAVLRFLET-
TH_1532|M.thermoresistible__bu SAEKHIASIFTKLGLEPDESENRRVLAVLRYLES-
MAB_4498c|M.abscessus_ATCC_199 TVEKHVHSVMRRLDLGHADEYHRRVLAVLAFLTHR
MLBr_01286|M.leprae_Br4923 DRRTTMKRVAEVVLETLDTPKDT------------
.. : : :