For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_1487 (-)

annotation: 2-nitropropane dioxygenase, NPD
coordinates: 1550511 - 1551581
length: 356

STLKTPLTELVGIEHPVVQTGMGWVAGARLVAATSNAGGLGILASATMTLTELTTAVAKVKAATDKPFGI
NIRADAGDAGERVDLLIREGVKVASFALAPKPDLIARLKEAGVVVIPSVGLAKHAKKVAGWGADAVIVQG
GEGGGHTGPIATTLLLPSVLDAVADTGMPVIAAGGFFDGRGLAAALTYGAAGVAMGTRFLLTKDSTVPDA
VKQRYLDAALDGTVVSTKVDGMPHRVLRTGLVEKLESGSPVRGLSAAVLNAQKFKKMSGMTWKSMITDGL
AMRHGKDLTWSQVVMAANTPMLLKAGLVEGNTEAGVLASGQVAGIIDDLPSCAELVPAIVAEAVEHLQKA
SQYIR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_1487--100% (356)2-nitropropane dioxygenase, NPD
M. gilvum PYR-GCKMflv_2128-2e-3629.01% (355) 2-nitropropane dioxygenase, NPD
M. gilvum PYR-GCKMflv_1222-8e-3136.48% (244) 2-nitropropane dioxygenase, NPD

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3583-1e-16681.82% (352) oxidoreductase
M. tuberculosis H37RvRv3553-1e-16681.82% (352) oxidoreductase
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_0603c-1e-16583.24% (352) 2-nitropropane dioxygenase
M. marinum MMMAR_5042-1e-16782.39% (352) 2-nitropropane dioxygenase
M. avium 104MAV_0607-1e-17385.51% (352) oxidoreductase, 2-nitropropane dioxygenase family protein
M. smegmatis MC2 155MSMEG_6004-0.092.13% (356) oxidoreductase, 2-nitropropane dioxygenase family protein
M. thermoresistible (build 8)TH_1758-1e-17687.75% (351) POSSIBLE OXIDOREDUCTASE
M. ulcerans Agy99MUL_4116-1e-16782.10% (352) 2-nitropropane dioxygenase
M. vanbaalenii PYR-1Mvan_5269-0.096.63% (356) 2-nitropropane dioxygenase, NPD

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_1487|M.gilvum_PYR-GCK          -MSTLKTPLTELVGIEHPVVQTGMGWVAGARLVAATSNAGGLGILASATM
Mvan_5269|M.vanbaalenii_PYR-1       -MSRLSTPLTELVGIEHPVVQTGMGWVAGARLVSATSNAGGLGILASATM
MSMEG_6004|M.smegmatis_MC2_155      -MSRLMTPLTELVGIEHPVVQTGMGWVAGARLVSATSNAGGLGILASATM
Mb3583|M.bovis_AF2122/97            --MRLRTPLTELIGIEHPVVQTGMGWVAGARLVSATANAGGLGILASATM
Rv3553|M.tuberculosis_H37Rv         --MRLRTPLTELIGIEHPVVQTGMGWVAGARLVSATANAGGLGILASATM
MMAR_5042|M.marinum_M               --MRLRTPLTDLVGVEHPVVQTGMGWVAGARLVSATANAGGLGILASATM
MUL_4116|M.ulcerans_Agy99           --MRLRTPLTDLVGVEHPVVQTGMGWVAGARLVSATANAGGLGILASATM
MAV_0607|M.avium_104                MDMRLRTPLTELVGVEHPVVQTGMGWVAGARLVSATANAGGLGILASATM
TH_1758|M.thermoresistible__bu      -LSRIRTPLTDLVGIEHPVVQTGMGWVAGARLVAATANAGGLGILASATM
MAB_0603c|M.abscessus_ATCC_199      MTQVLKTALTQLVGIEHPVVQTGMGWVAGPRLVAATSNAGGLGILASATM
                                        : *.**:*:*:**************.***:**:*************

Mflv_1487|M.gilvum_PYR-GCK          TLTELTTAVAKVKAATDKPFGINIRADAGDAGERVDLLIREGVKVASFAL
Mvan_5269|M.vanbaalenii_PYR-1       TLEELTTAVAKVKAATDKPFGINIRADAGDANARVDLLIREGVKVASFAL
MSMEG_6004|M.smegmatis_MC2_155      TLDELKTAVAKVKAATDKPFGINIRADAGDANERVDLLISEGVKVASFAL
Mb3583|M.bovis_AF2122/97            TLDELAAAITKVKAVTDKPFGVNIRADAADAGDRVELMIREGVRVASFAL
Rv3553|M.tuberculosis_H37Rv         TLDELAAAITKVKAVTDKPFGVNIRADAADAGDRVELMIREGVRVASFAL
MMAR_5042|M.marinum_M               TLDELATAIGKVKATTDKPFGVNIRADAADASDRVELMIREGVKVASFAL
MUL_4116|M.ulcerans_Agy99           TLDELATAIGKVKATTDKPFGVNIRADAADASDRVELMIREGVKVASFAL
MAV_0607|M.avium_104                TLDELATAIAKVKAATDKPFGVNIRADAADAADRVDLMIREGVKVASFAL
TH_1758|M.thermoresistible__bu      TLDELQTAVDKVKAATDKPFGINIRADAGDANERVDLLIREGVKVASFAL
MAB_0603c|M.abscessus_ATCC_199      TLDELIAAVAKTKSLTDKPFGVNIRADAGDATERIDLLIREKVKVASFAL
                                    ** ** :*: *.*: ******:******.**  *::*:* * *:******

Mflv_1487|M.gilvum_PYR-GCK          APKPDLIARLKEAGVVVIPSVGLAKHAKKVAGWGADAVIVQGGEGGGHTG
Mvan_5269|M.vanbaalenii_PYR-1       APKPDLIARLKDAGVVVIPSVGLAKHAKKVAGWGADAVIVQGGEGGGHTG
MSMEG_6004|M.smegmatis_MC2_155      APKPDLIAKLKEAGVVVIPSVGLAKHAKKVASWGADAVIVQGGEGGGHTG
Mb3583|M.bovis_AF2122/97            APKQQLIARLKEAGAVVIPSIGAAKHARKVAAWGADAMIVQGGEGGGHTG
Rv3553|M.tuberculosis_H37Rv         APKQQLIARLKEAGAVVIPSIGAAKHARKVAAWGADAMIVQGGEGGGHTG
MMAR_5042|M.marinum_M               APKPELIARLKEAGAVVIPSIGAAKHARKVAGWGADAMIVQGGEGGGHTG
MUL_4116|M.ulcerans_Agy99           APKPELIARLKEAGAVVIPSIGAAKHARKVAGWGADAMIVQGGEGGGHTG
MAV_0607|M.avium_104                APKQELIARLKEAGAVVIPSIGAAKHARKVAGWGADAMIVQGGEGGGHTG
TH_1758|M.thermoresistible__bu      APKPELIARLKDAGVVVIPSVGAARHAEKVAGWGADAVIVQGGEGGGHTG
MAB_0603c|M.abscessus_ATCC_199      APKQDLIAKLKDNGVVVVPSIGAAKHAKKVAAWGADAVIVQGGEGGGHTG
                                    *** :***:**: *.**:**:* *:**.***.*****:************

Mflv_1487|M.gilvum_PYR-GCK          PIATTLLLPSVLDAVADTGMPVIAAGGFFDGRGLAAALTYGAAGVAMGTR
Mvan_5269|M.vanbaalenii_PYR-1       PIATTLLLPSVLDAVADTGMPVIAAGGFFDGRGLAAALSYGAAGVAMGTR
MSMEG_6004|M.smegmatis_MC2_155      PIATTLLLPSVLDAVADTGMPVIAAGGFFDGRGLAAALSYGAAGVAMGTR
Mb3583|M.bovis_AF2122/97            PVATTLLLPSVLDAVAGTGIPVIAAGGFFDGRGLAAALCYGAAGVAMGTR
Rv3553|M.tuberculosis_H37Rv         PVATTLLLPSVLDAVAGTGIPVIAAGGFFDGRGLAAALCYGAAGVAMGTR
MMAR_5042|M.marinum_M               PVATTLLLPSVLDAVKGTGIPVIAAGGFFDGRGLAAALSYGAAGVAMGTR
MUL_4116|M.ulcerans_Agy99           PVATTLLLPSVLDAVKGTGIPVIAAGGFFDGHGLAAALSYGAAGVAMGTR
MAV_0607|M.avium_104                PVATTLLLPSVLDAVRGTGIPVIAAGGFFDGRGLAAALSYGAAGVAMGTR
TH_1758|M.thermoresistible__bu      PVPTTLLLPSVLDAVRDTGMPVVAAGGFFDGRGLAAALAYGAAGVAMGTR
MAB_0603c|M.abscessus_ATCC_199      PVATTLLLPSVLDAVKDTGMPVVAAGGFFDGRGLAAALSYGAAGVAMGTR
                                    *:.************ .**:**:********:****** ***********

Mflv_1487|M.gilvum_PYR-GCK          FLLTKDSTVPDAVKQRYLDAALDGTVVSTKVDGMPHRVLRTGLVEKLESG
Mvan_5269|M.vanbaalenii_PYR-1       FLLTSDSTVPDAVKQRYLDAALDGTVVSTKVDGMPHRVLRTGLVEKLESG
MSMEG_6004|M.smegmatis_MC2_155      FLLTSDSTVPDAVKQRYLQAALDGTVVSTRVDGMPHRVLRTGLVEKLESG
Mb3583|M.bovis_AF2122/97            FLLTSDSTVPDAVKRRYLQAGLDGTVVTTRVDGMPHRVLRTELVEKLESG
Rv3553|M.tuberculosis_H37Rv         FLLTSDSTVPDAVKRRYLQAGLDGTVVTTRVDGMPHRVLRTELVEKLESG
MMAR_5042|M.marinum_M               FLLTSDSTVPEAVKRRYLQAALDGTVVTTRVDGMPHRVLRTGLVEKLEGG
MUL_4116|M.ulcerans_Agy99           FLLTSDSTVPDAVKRRYLQAALDGTVVTTRVDGMPHRVLRTGLVEKLEGG
MAV_0607|M.avium_104                FLLTSDSTVPDAVKKRYLEAALDGTVVTTRVDGMPHRVLRTGLVEKLESG
TH_1758|M.thermoresistible__bu      FLLTKDSTVPDAVKRRYLEAGLDGTVVSTRVDGMPHRVLRTGLVEKLESG
MAB_0603c|M.abscessus_ATCC_199      FLLTSDSSVPDGVKQRYLASDLAGTVVSTRVDGMPHRVLRTELVEKLESG
                                    ****.**:**:.**:*** : * ****:*:*********** ******.*

Mflv_1487|M.gilvum_PYR-GCK          SPVRGLSAAVLNAQKFKKMSGMTWKSMITDGLAMRHGKDLTWSQVVMAAN
Mvan_5269|M.vanbaalenii_PYR-1       SPIRGLSAAVLNAQKFKKMSGMTWKSMITDGLAMRHGKDLTWSQVVMAAN
MSMEG_6004|M.smegmatis_MC2_155      SRVRGFAAAVGNAQKFKKMSGMTWRSMIKDGLAMRHGKELTWSQVVMAAN
Mb3583|M.bovis_AF2122/97            SRARGFAAALRNAGKFRRMSQMTWRSMIRDGLTMRHGKELTWSQVLMAAN
Rv3553|M.tuberculosis_H37Rv         SRARGFAAALRNAGKFRRMSQMTWRSMIRDGLTMRHGKELTWSQVLMAAN
MMAR_5042|M.marinum_M               SRARGFTAAIRNAAKFKQMSQMSWASMIKDGLAMRHGKELTWSQVVMAAN
MUL_4116|M.ulcerans_Agy99           SRARGFTAAIRNAAKFKQMSQMSWASMIKDGLAMRHGKELTWSQVLMAAN
MAV_0607|M.avium_104                SPVRGLTAAVRNAAKFKHMSKMTWRSMISDGLAMRHGKEMTWSQVVMAAN
TH_1758|M.thermoresistible__bu      SPIRGFTAAVRNAQKFKKMTGMTWRSMIRDGLEMRRGKDLTWAQVIMAAN
MAB_0603c|M.abscessus_ATCC_199      SRVRGFTAAVRNAAKFKKMTGMSWASMVKDGLAMRHGKELTWSQVLMAAN
                                    *  **::**: ** **::*: *:* **: *** **:**::**:**:****

Mflv_1487|M.gilvum_PYR-GCK          TPMLLKAGLVEGNTEAGVLASGQVAGIIDDLPSCAELVPAIVAEAVEHLQ
Mvan_5269|M.vanbaalenii_PYR-1       TPMLLKAGLVEGNTDAGVLASGQVAGIIDDLPSCAELVPAIVAEAVEHLQ
MSMEG_6004|M.smegmatis_MC2_155      TPMLLKAGLVEGNTDAGVLASGQVTGIIDDLPSCAELVPAIVADAVEHLN
Mb3583|M.bovis_AF2122/97            TPMLLKAGLVDGNTEAGVLASGQVAGILDDLPSCKELIESIVLDAITHLQ
Rv3553|M.tuberculosis_H37Rv         TPMLLKAGLVDGNTEAGVLASGQVAGILDDLPSCKELIESIVLDAITHLQ
MMAR_5042|M.marinum_M               TPMLLKAGLVDGNPEAGVLASGQVAGILDDLPSCAQLVESIVHDAIEHLR
MUL_4116|M.ulcerans_Agy99           TPMLLKAGLVDGNPEAGVLASGQVAGILDDLPSCAQLVESIVHDAIEHLR
MAV_0607|M.avium_104                TPMLLKAGLVEGNTEAGVLASGQVAGILEDLPSCAELIDSIVRDAIAHLR
TH_1758|M.thermoresistible__bu      TPMLLKAGLVEGNTEAGVLASGQVAGILDDLPSCAELIEQIVADAVRHLK
MAB_0603c|M.abscessus_ATCC_199      TPMLLKAGLVEGNTNAGVLASGQVAGILDDLPSCHELIDAIVTDAVAHLK
                                    **********:**.:*********:**::***** :*:  ** :*: **.

Mflv_1487|M.gilvum_PYR-GCK          KASQYIR--
Mvan_5269|M.vanbaalenii_PYR-1       KASQHIR--
MSMEG_6004|M.smegmatis_MC2_155      KASSFIQEK
Mb3583|M.bovis_AF2122/97            TASALVE--
Rv3553|M.tuberculosis_H37Rv         TASALVE--
MMAR_5042|M.marinum_M               AAAALVE--
MUL_4116|M.ulcerans_Agy99           AAAALVE--
MAV_0607|M.avium_104                SASGLIEE-
TH_1758|M.thermoresistible__bu      GAVALVEE-
MAB_0603c|M.abscessus_ATCC_199      AANATIL--
                                     *   :