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M. gilvum PYR-GCK Mflv_0118 (-)

annotation: binding-protein-dependent transport systems inner membrane component
coordinates: 106206 - 107210
length: 334

ESRGVDTLTPARAAARLLAVRTAVAAPLTVGISAAIFAVASLSPFDPLAAYLGGNYQFATQSQRDAMREA
YHTDMPWYQAWWQWIGGVARGELGWSSTQSQPVTTVLVERMPFTLALSGAALLTATLVAILLGCLAGMHR
GGLIDRLCTGFSVTFAAVPPFVVSLALVVVVAVGLRWLPASGAAAPGADYTIEGVLRHGILPWIALTVSM
IPWLLLTTRAAVVESVDSDAVRAARSRGVHGWALLRGHIAPVSVLPTLALLGTRLPELIAGAAIVETVFG
WPGMAAVLVDSAAALDFPLLAALTVAAAAAVLAGSALSDAAAVAIDPRVRMSA*

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. gilvum PYR-GCK Mflv_0118 - - 100% (334) binding-protein-dependent transport systems inner membrane component
M. gilvum PYR-GCK Mflv_2760 - 3e-42 33.65% (318) binding-protein-dependent transport systems inner membrane
M. gilvum PYR-GCK Mflv_2261 - 3e-26 26.93% (323) binding-protein-dependent transport systems inner membrane

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb3689c dppB 1e-30 27.80% (313) peptide ABC transporter transmembrane protein
M. tuberculosis H37Rv Rv3665c dppB 1e-30 27.80% (313) peptide ABC transporter transmembrane protein
M. leprae Br4923 MLBr_01124 - 1e-27 29.09% (330) putative binding-protein dependent transport protein
M. abscessus ATCC 19977 MAB_0720 - 1e-33 29.59% (338) oligopeptide ABC transporter, permease protein
M. marinum M MMAR_5153 dppB 9e-31 28.43% (313) dipeptide-transport integral membrane protein ABC
M. avium 104 MAV_0465 dppB 5e-32 30.03% (313) ABC transporter, permease protein DppB
M. smegmatis MC2 155 MSMEG_4355 - 9e-42 33.44% (323) peptide ABC transporter, permease protein
M. thermoresistible (build 8) TH_3519 - 1e-133 72.24% (317) PUTATIVE putative binding-protein-dependent transport systems
M. ulcerans Agy99 MUL_4239 dppB 1e-30 28.12% (313) dipeptide-transport integral membrane protein ABC
M. vanbaalenii PYR-1 Mvan_3774 - 3e-41 31.60% (326) binding-protein-dependent transport systems inner membrane

CLUSTAL 2.0.9 multiple sequence alignment


Mb3689c|M.bovis_AF2122/97           --------------MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVA
Rv3665c|M.tuberculosis_H37Rv        --------------MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVA
MAV_0465|M.avium_104                --------------MGWYIARRIAVMVPVFLGATLLIYAMVFLLPGDPVA
MMAR_5153|M.marinum_M               --------------MVWYVARRILAMVPVFLGATLLIYGMVFLLPGDPLA
MUL_4239|M.ulcerans_Agy99           --------------MVWYVARRILAMVPVFLGATLLIYGMVFLLPGDPLA
MSMEG_4355|M.smegmatis_MC2_155      ---MTSTRLLGNHPIVRFLAQRLLYSAVVLVGVLIVVFTLVHLVPGDPVR
Mvan_3774|M.vanbaalenii_PYR-1       ---MSTA-----MPVLRFVARRLLFSAVVMIGVLVVVFALVHLVPGDPVR
MAB_0720|M.abscessus_ATCC_1997      ---MSTT-------LLRYLGVRLALIIPTAWILMTLVFVLMRGIG-DPIT
MLBr_01124|M.leprae_Br4923          --------------MMRFLARRLLNYVVLLALASFLTYCLTSMAFAPLDS
Mflv_0118|M.gilvum_PYR-GCK          MESRGVDTLTPARAAARLLAVRTAVAAPLTVGISAAIFAVASLSPFDPLA
TH_3519|M.thermoresistible__bu      -----------------LLVIRAGITVPVTAAVSLAMFWVAALSPFDPLV
                                                      :  *               : :          

Mb3689c|M.bovis_AF2122/97           ALA--GDRPLTPAVAAQLRSHYHLDDPFLVQYLRYLGGILHGDLGRAYS-
Rv3665c|M.tuberculosis_H37Rv        ALA--GDRPLTPAVAAQLRSHYHLDDPFLVQYLRYLGGILHGDLGRAYS-
MAV_0465|M.avium_104                AIA--GDRPLTPAVAAALRARYHLDDPFLVQYLRYLGGVLRGDLGRAYS-
MMAR_5153|M.marinum_M               AIA--GDRPLTPAVAQQLRARYHLDDPFLVQYAHYLGGVLHGDLGRAYS-
MUL_4239|M.ulcerans_Agy99           AIA--GDRPLTPAVAQQLRARYHLDDPFLVQYAHYLGGVLHGDLGRAYS-
MSMEG_4355|M.smegmatis_MC2_155      IAL--GTR-YTPEAYEALRTASGMDRPIVEQFFGYIGSALTGDLGVSFRN
Mvan_3774|M.vanbaalenii_PYR-1       IAL--GTR-YTPEAYEALRAASGLDRPIVSQFFGYLGSALTGDLGVSFRN
MAB_0720|M.abscessus_ATCC_1997      AQA--GGR-LTPAEIAKRKAEAGFDRPIWAQYWEYLTGLLRGDLGQTLTD
MLBr_01124|M.leprae_Br4923          LLQ--RSPHPPQAMVDAKAHALGLDKPIPIRYANWASHAIRGDFGTTIT-
Mflv_0118|M.gilvum_PYR-GCK          AYLGGNYQFATQSQRDAMREAYHTDMPWYQAWWQWIGGVARGELGWSSTQ
TH_3519|M.thermoresistible__bu      ARLGANYQFADEAQREAMRAAYQTGQPWWQAWWQWLSGVMHGDLGWSSTQ
                                                            . *    :  :      *::* :   

Mb3689c|M.bovis_AF2122/97           GLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLRQGGIFDSAVL
Rv3665c|M.tuberculosis_H37Rv        GLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLRQGGIFDSAVL
MAV_0465|M.avium_104                GLPVSDVLAHAFPVTLRLSLIALAVEAVLGIGFGVIAGLRQGGLFDSAVL
MMAR_5153|M.marinum_M               GLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLRQGGIFDATVL
MUL_4239|M.ulcerans_Agy99           GLPVSAVLAHAFPVTIRLAWIALAVEAVLGIGFGVIAGLRQGGIFDATVL
MSMEG_4355|M.smegmatis_MC2_155      GDPVTVTLLERLPATLSLGLVGILIALVIAIPAGIWSALREGRVSDAIVR
Mvan_3774|M.vanbaalenii_PYR-1       GDPVTLTLLERLPATLSLGLVGIVIALAIALPAGIYAALREGRLSDALVR
MAB_0720|M.abscessus_ATCC_1997      KRSIADIIVVNGAATLELAVGAIVVALLVGIPLGRIAATHRDRIADVFLR
MLBr_01124|M.leprae_Br4923          GQPVGSTLGRRVGVSLRLLIIGSLTGTVLGVTAGAWGAIRQYQLSDRVVT
Mflv_0118|M.gilvum_PYR-GCK          SQPVTTVLVERMPFTLALSGAALLTATLVAILLGCLAGMHRGGLIDRLCT
TH_3519|M.thermoresistible__bu      GRPVTTVLAERMPFTLGLSAAALITAAVLAVLVGCAAGMRRGGLLDRLSS
                                      .:   :      :: *   .      :.:  *  .. :.  : *    

Mb3689c|M.bovis_AF2122/97           VTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVT----VGERAS--------
Rv3665c|M.tuberculosis_H37Rv        VTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVT----VGERAS--------
MAV_0465|M.avium_104                ITGLVIIAVPIFVLGFLAQFVFGVRLGIAPVT----VGNAAT--------
MMAR_5153|M.marinum_M               LTGLIIIAVPIFVLGFLAQYLFGVRLGLAPVT----VGARTT--------
MUL_4239|M.ulcerans_Agy99           LTGLIIIAAPIFVLGFLAQYLFGVRLGLAPVT----VGARTT--------
MSMEG_4355|M.smegmatis_MC2_155      VASQFGVSIPDFRLGILLIGLFASVLGWLPTSGYRPLFDDPG--------
Mvan_3774|M.vanbaalenii_PYR-1       ISSQFGVSIPDFWMGILLIALFSTVLGWLPTSGYRPLTEDPA--------
MAB_0720|M.abscessus_ATCC_1997      LAAVFFYAAPVFFVAILLKLFFSVKLGWLPASGRSTVGTEIALDAMPHRT
MLBr_01124|M.leprae_Br4923          LLALLVLSTPTFVIANLLILSALRVNWAFGIQLFDYTGETSPG-------
Mflv_0118|M.gilvum_PYR-GCK          GFSVTFAAVPPFVVSLALVVVVAVGLRWLPASGAAAPGADYTIEG-----
TH_3519|M.thermoresistible__bu      TLAVVFAAVPPFVVSLALVAGVAVGLRWLPVSGAAPPGAEYTVPG-----
                                      .    : * * :.                                   

Mb3689c|M.bovis_AF2122/97           -------------------VGRLLLPGIVLGAMSFAYVVRLTRSAVAANA
Rv3665c|M.tuberculosis_H37Rv        -------------------VGRLLLPGIVLGAMSFAYVVRLTRSAVAANA
MAV_0465|M.avium_104                -------------------FTRLLLPGIVLGSVSFAYVVRLTRSTVAVNA
MMAR_5153|M.marinum_M               -------------------LDRLLLPGMVLGAVSFAYVVRLTRSAVAANA
MUL_4239|M.ulcerans_Agy99           -------------------LDRLLLPGMVLGAVSFAYVVRLTRSAVAANA
MSMEG_4355|M.smegmatis_MC2_155      -----------------GWLRHIILPGLTVGLVAGAILTRYVRSAVLEVA
Mvan_3774|M.vanbaalenii_PYR-1       -----------------GWLRHVVLPGLTVGVVAAAIMTRYVRSAVLEVA
MAB_0720|M.abscessus_ATCC_1997      HLLLVDTVLYGNGAYFVDALKHLVLPVLALGLLTAGVFLRLVRVNLLQTL
MLBr_01124|M.leprae_Br4923          -------VYGGAWAHVIDRLRHLILPTLTLALVGAAGYSRYQRNAMLDVL
Mflv_0118|M.gilvum_PYR-GCK          ------------------VLRHGILPWIALTVSMIPWLLLTTRAAVVESV
TH_3519|M.thermoresistible__bu      ------------------VLTHAVLPLTALTVSQLPWLLLTTRTAVVEAA
                                                       . : :**  .:            *  :    

Mb3689c|M.bovis_AF2122/97           HADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGGAIVTE
Rv3665c|M.tuberculosis_H37Rv        HADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGGAIVTE
MAV_0465|M.avium_104                HADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGGAIVTE
MMAR_5153|M.marinum_M               HADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGGAVVTE
MUL_4239|M.ulcerans_Agy99           HADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGGAVVTE
MSMEG_4355|M.smegmatis_MC2_155      AMGYVRTARSKGLPPPVVTFRHIVRNALLPVLTITGIQLATILGGVIVVE
Mvan_3774|M.vanbaalenii_PYR-1       AMGYVRTARSKGLSPRIVTFRHTVRNALVPILTITGIQLATLLGGVIVVE
MAB_0720|M.abscessus_ATCC_1997      RAGYVDAARARGLPERVVVGRHAFRNSLVPVVTVMGMQIAMLLAGAVLTE
MLBr_01124|M.leprae_Br4923          SQDFIRAARAKGLTRRRALLKHGLRTALIPMATLFAYGVAGLVTGALFVE
Mflv_0118|M.gilvum_PYR-GCK          DSDAVRAARSRGVHGWALLRGHIAPVSVLPTLALLGTRLPELIAGAAIVE
TH_3519|M.thermoresistible__bu      ASDAVRGARARGIDGWPLLRGHIAPVAVLPTLALLGTRLPELIAGAAVVE
                                      . :  * ::*:        *    :::*  :. .  :  :: *. ..*

Mb3689c|M.bovis_AF2122/97           GIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD
Rv3665c|M.tuberculosis_H37Rv        GIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD
MAV_0465|M.avium_104                GIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLIYLVTNLVVDLLYAVLD
MMAR_5153|M.marinum_M               GIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVMVYLLTNLLVDLLYAALD
MUL_4239|M.ulcerans_Agy99           GIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVMVYLLTNLLVDLLYAALD
MSMEG_4355|M.smegmatis_MC2_155      VVFAWPGLGRLVFNSVAARDYPVIQGAVLLIAVLFLLINLLVDVLYAVVD
Mvan_3774|M.vanbaalenii_PYR-1       VVFAWPGLGRLVFNAVAARDYPLIQGAVLLIAALFLVINLLVDVLYAVVD
MAB_0720|M.abscessus_ATCC_1997      TAFEWNGLGSQLAHYLSARDFIAVQGIVTVIAIIVAVMSFVIDLVVAFID
MLBr_01124|M.leprae_Br4923          KIFGWHGMGEWMVQGVATQDTNIIAAITIFFGTVILLAGLLSDVIYAALD
Mflv_0118|M.gilvum_PYR-GCK          TVFGWPGMAAVLVDSAAALDFPLLAALTVAAAAAVLAGSALSDAAAVAID
TH_3519|M.thermoresistible__bu      AVFGWPGMAAALVDSAAALDFPLLAALTVGAVLAVLMGSALSDAAAVLID
                                      *   *:.  : .  :  :   : . .          . : *   . :*

Mb3689c|M.bovis_AF2122/97           PRIRYG-
Rv3665c|M.tuberculosis_H37Rv        PRIRYG-
MAV_0465|M.avium_104                PRIRYG-
MMAR_5153|M.marinum_M               PRIRYG-
MUL_4239|M.ulcerans_Agy99           PRIRYG-
MSMEG_4355|M.smegmatis_MC2_155      PRIRLS-
Mvan_3774|M.vanbaalenii_PYR-1       PRIRLG-
MAB_0720|M.abscessus_ATCC_1997      PRVRF--
MLBr_01124|M.leprae_Br4923          PRVRVS-
Mflv_0118|M.gilvum_PYR-GCK          PRVRMSA
TH_3519|M.thermoresistible__bu      PRIELTA
                                    **:.

species	id	gene	e-value	identity (len)	annotation
M. gilvum PYR-GCK	Mflv_0118	-	-	100% (334)	binding-protein-dependent transport systems inner membrane component
M. gilvum PYR-GCK	Mflv_2760	-	3e-42	33.65% (318)	binding-protein-dependent transport systems inner membrane
M. gilvum PYR-GCK	Mflv_2261	-	3e-26	26.93% (323)	binding-protein-dependent transport systems inner membrane