For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MKPSPADTHVVIAGAGIAGLAAAMILAEAGVRVTLCEAASEAGGKAKSLRLADGHPTEHSLRVYTDTYQT LLTLFSRIPTEHDRTMLDNLVGVSMVSATAQGVIGRIAAPVALQRRRPTFARIIGKVVEPPRQLVRILLR GPMVIVGLAQRGVPATDVLHYLYAHLRLLWMCRERLLAELGDISYADYLQLGCKSAQAQEFFSAVPRIYV AARTSAEAAAIAPIVLKGLFRLKSNCPSALNDAKLPAIMMMDGPTSERMVDPWIRHLTRLGVDIHFNTRV GDLEFDDGRVTALISSDGRRFACDYALLAVPYLTLRELAKSAHVKRYLPQLTQQHALALEASNGIQCFLR DLPATWPPFIRPGVVTTHLQSQWSLVCVLQGEGFWKNVRLPEGTRYVLSITWSDVETPGPVFDRPLSECT PDEILTECLTQCGLDKSNVLGWRIDHELKHLDEAEYEKVASELPPHLVSAPARGQRMVNFSPLTVLMPGA RHRSPGICTSVPNLLLAGEVIYSPDLTLFVPTMEKAACSGYLAARQIMNMVASHAAPLRIDFRDPAPFAV LRRVDRWFWSRRRRPPDRSTFATPPTAMPAPSHLTDVDRSAS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3754 | - | - | 100% (602) | oxidoreductase |
M. bovis AF2122 / 97 | Mb0457c | - | 1e-05 | 27.54% (138) | hypothetical protein Mb0457c |
M. bovis AF2122 / 97 | Mb0921c | - | 2e-05 | 44.44% (54) | oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv3727 | - | 0.0 | 99.83% (602) | oxidoreductase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2963 | - | 0.0 | 68.78% (583) | oxidoreductase |
M. avium 104 | MAV_0198 | - | 8e-05 | 36.36% (66) | FAD dependent oxidoreductase, putative |
M. smegmatis MC2 155 | MSMEG_2347 | - | 5e-05 | 52.27% (44) | phytoene dehydrogenase |
M. thermoresistible (build 8) | TH_1483 | - | 1e-05 | 39.47% (76) | dehydrogenase |
M. ulcerans Agy99 | MUL_1404 | - | 8e-06 | 30.66% (137) | oxidoreductase |
M. vanbaalenii PYR-1 | Mvan_4388 | - | 1e-05 | 59.46% (37) | amine oxidase |
CLUSTAL 2.0.9 multiple sequence alignment Mb3754|M.bovis_AF2122/97 -------MKPSPAD----------THVVIAGAGIAGLAAAMILAEAGVRV Rv3727|M.tuberculosis_H37Rv -------MKPSPAD----------THVVIAGAGIAGLAAAMILAEAGVRV MMAR_2963|M.marinum_M -------MRHPEKSP--------IPHVVIAGAGIAGMAAAMILAEAGVRV TH_1483|M.thermoresistible__bu LTDPRRVHHHAPPGLPDARGLARRPHVVVVGAGIAGLAAATGLAERGVTV MSMEG_2347|M.smegmatis_MC2_155 -------MSRAIPGP--------TDHVVVVGAGLSGLSAALHLAGRGRRV MAV_0198|M.avium_104 -------MN--------------DYDAIVIGAGHNGLTAAVLLQKAGLRT MUL_1404|M.ulcerans_Agy99 -------MQQKTLTQR---------SIAVIGSGVAGLTAAYLLSGRD-RV Mvan_4388|M.vanbaalenii_PYR-1 -------MLALTRR------------QFTLGLGAVAATPLLTSCGGGGDT * * . :. . . Mb3754|M.bovis_AF2122/97 TLCEAASEAGGKAK------SLRLADGHPTEHSLRVYTDTYQTLLTLF-- Rv3727|M.tuberculosis_H37Rv TLCEAASEAGGKAK------SLRLADGHPTEHSLRVYTDTYQTLLTLF-- MMAR_2963|M.marinum_M TVCEAAPEAGGKAK------SLRRPDGHPTEHSLRVYLDYYQTLLTLF-- TH_1483|M.thermoresistible__bu DVVEQAGYLGGRVGGWTEDIGPDVPGGAAMNRGFHAFFRQYYNLRTLL-- MSMEG_2347|M.smegmatis_MC2_155 TVVEREPWPGGRAG--------RIDTGGYRIDTGPTVLTMPDILDDVF-- MAV_0198|M.avium_104 LCLDAKLYAGGMAS------TVELFDGYRFEIAGSVQFPTSQAVVDELGL MUL_1404|M.ulcerans_Agy99 TLYEADTRLGGHAHT----HCLDAGDGTFVGVDSAFLVHNDRTYPTLC-- Mvan_4388|M.vanbaalenii_PYR-1 TRGHVVVVGAGMSG----------LAAARRLTDAGVPVTVVEARSRIG-- . .* . Mb3754|M.bovis_AF2122/97 ---SRIPTEHDRTMLDNLVGVSMVSATAQGVIGRIAAPVALQRRRPTFAR Rv3727|M.tuberculosis_H37Rv ---SRIPTEHDRTVLDNLVGVSMVSATAQGVIGRIAAPVALQRRRPTFAR MMAR_2963|M.marinum_M ---LRIPTESGKTVLDNLVGVNAVRVYRHRTFGRAAAPAPARRRRTTFA- TH_1483|M.thermoresistible__bu ---RRIDPGLG--MLTPVDDYPLVDAHGRRDTFRGLP------KTPPFNA MSMEG_2347|M.smegmatis_MC2_155 ---AAVGESVGDRLQLLPVDPAYRAQFADGSALEVHS------DADRMAA MAV_0198|M.avium_104 DTIPTIDLDVMSVAVRGVGDDPLVQYSDPVKLFTHLNEVHGADAVNGMAG MUL_1404|M.ulcerans_Agy99 ----RLFAELGVATQESEMSMSVRADDIGLEYAGALG-------PRGLFA Mvan_4388|M.vanbaalenii_PYR-1 ----------GRTWTDTSLGLPVDLGAAWIHGSQGNP-------LTGLAA . : Mb3754|M.bovis_AF2122/97 IIGKVVEPPRQLVRILLRGPMVIVGLAQRGVPATDVLHYLYAHLRLLWMC Rv3727|M.tuberculosis_H37Rv IIGKVVEPPRQLVRILLRGPMVIVGLAQRGVPATDVLHYLYAHLRLLWMC MMAR_2963|M.marinum_M LLARVFEPLAQFSRMVVRSALVIVGMASRGVSPIDAIRYLHAHVRLLWMC TH_1483|M.thermoresistible__bu MAFALRSPTFRLRDLIRLNARAAAPLAAVELPG----------------- MSMEG_2347|M.smegmatis_MC2_155 AIADLAGPSEAAG--YRRLRDWLTRLYRIEIDG----------------- MAV_0198|M.avium_104 LMAWAQAPTRALDRFEAGTPPKSLDEMYACATN----------------- MUL_1404|M.ulcerans_Agy99 CSAALRPRYLMMLAEILRFHRAASRLLREDTAG----------------- Mvan_4388|M.vanbaalenii_PYR-1 QAGARTVETNFDDVVVLDGGRAVDPAAVEEVSR----------------- Mb3754|M.bovis_AF2122/97 RERLLAELGDISYADYLQLG--CKSAQAQEFFSAVPRIYVAARTSAEAAA Rv3727|M.tuberculosis_H37Rv RERLLAELGDISYADYLQLG--CKSAQAQEFFSAVPRIYVAARTSAEAAA MMAR_2963|M.marinum_M PERLTAELADVAYEDYLQLG--KKAPRAQAFFSALPRIFVAARPNAEAAA TH_1483|M.thermoresistible__bu ---IYRHLDDTDAESFLRAIN-FPPAARHLAFEVFSRSFFAQPSQLSAAE MSMEG_2347|M.smegmatis_MC2_155 --FIGANFDSPLSLLTPQLAQ-LAAIGGFGKWDHMVRRHLRDPRLQRVFT MAV_0198|M.avium_104 -EFERSAIDDMLFGSVTDILDRYLPDREKHGALRGSMTVLAVNTLYRGPA MUL_1404|M.ulcerans_Agy99 ----------SAGDDLETLEAFLKRHRFSSFFVDYFITPLVAAVWSCTAG Mvan_4388|M.vanbaalenii_PYR-1 -----DWMGVLDEIEPMTADAAPDVSLADGLVWAGADLEDPLMQWMVSAA Mb3754|M.bovis_AF2122/97 IAPIVLKGLFRLKSNCPSALNDAKLPAIMMMDGPTSERMVDPWIRHLTRL Rv3727|M.tuberculosis_H37Rv IAPIVLKGLFRLKSNCPSALNDAKLPAIMMMDGPTSERMVDPWIRHLTRL MMAR_2963|M.marinum_M IAPIILKGLFHFTS-RPAALNGITAPSIMMMNGPTSERMVDPWIRHLQTL TH_1483|M.thermoresistible__bu LATMFH--IYFLGSSEGLVFDVVNANFDVALWNPLRDQLES--------- MSMEG_2347|M.smegmatis_MC2_155 FQSLYAGVSPQRALAAYAVIAYMDTISGVFFPKGGVRAVPDALAAAGADA MAV_0198|M.avium_104 TPGSAAALAFGLGVPDGDTMQMKKLRGGIGALTS---HLCDVLERHGGEL MUL_1404|M.ulcerans_Agy99 DALRYPARYLFVFLEHHGMLSVFGSPTWRTVTGGSVNYVRAIASS----- Mvan_4388|M.vanbaalenii_PYR-1 IGAEYAADPEELALRWFGHEGEFDGPD--LILPGGYRQLIDHLAR----- : Mb3754|M.bovis_AF2122/97 GVDIHFNTRVGDLEFDDGRVTALISSDGRRFACDYALLAVPYLTLRELAK Rv3727|M.tuberculosis_H37Rv GVDIHFNTRVGDLEFDDGRVTALISSDGRRFACDYALLAVPYLTLRELAK MMAR_2963|M.marinum_M GVDLKFDTRIDDLEFRDGRVTALVSADGRRFGCDFAVLALPYLTLRRLAE TH_1483|M.thermoresistible__bu -RGVRFHTGVGVRAVDAGARFRVSCDSGDELTADGVVLAT---------- MSMEG_2347|M.smegmatis_MC2_155 GVRFHYGATVNCLERSADRVTAVHTDTGERIPCDAVVLTT---------- MAV_0198|M.avium_104 RLRTKVTEILVEHAGSGGRVTGVRTESGETLSAPIVVSGI---------- MUL_1404|M.ulcerans_Agy99 LDEVRTGAAVHSLRRTADGVVIRAGGDAPRCFDAAVVAVH---------- Mvan_4388|M.vanbaalenii_PYR-1 DLDIRLDAEVTRIAYDDVGVTVETAQEVLRADRVIVTVPLG--------- : : . Mb3754|M.bovis_AF2122/97 SAHVKRYLPQLTQQHALALEASNGIQCFLRDLPATWPPFIRPGVVTTHLQ Rv3727|M.tuberculosis_H37Rv SAHVKRYLPQLTQQHALALEASNGIQCFLRDLPATWPPFIRPGVVTTHLQ MMAR_2963|M.marinum_M RDCVSRHLPHLTQQHAIALESSNGLQFFLRDIPPTWPAHVRPGVVGTHFE TH_1483|M.thermoresistible__bu --------------------DVTGLQRIVAASPGLGDAGWRDRIAGLHTA MSMEG_2347|M.smegmatis_MC2_155 -------------------ELPRTYELLGRTPRRPRPWRASPSAVVVHVG MAV_0198|M.avium_104 ---------------------APDVTLNELLDPAALPADLRARYARIDHR MUL_1404|M.ulcerans_Agy99 ----------------------PDQALLLLDDPTTWERNVLGAIPYSTNR Mvan_4388|M.vanbaalenii_PYR-1 -------------------VLKAGVIVFDPPLPQAKRAAVERLGFGLLDK Mb3754|M.bovis_AF2122/97 SQWSLVCVLQGEGFWKNVRLPEGTRYVLSITWSDVETPGPVFDRPLSECT Rv3727|M.tuberculosis_H37Rv SQWSLVCVLQGEGFWKNVRLPEGTRYVLSITWSDVETPGPVFDRPLSECT MMAR_2963|M.marinum_M SEWALVSVLQGEGFWADVALPAGTKYVLSITWSDVDTPGPVFGRPASECT TH_1483|M.thermoresistible__bu PPFVVHRLWLDR-----PVAPDRPPFLGTGGWSPLDN-------VSVLET MSMEG_2347|M.smegmatis_MC2_155 CRRIDRPVAHHN-----ILFGD----AWHDTFTDIIDDGRLMRDPSLLVT MAV_0198|M.avium_104 GSYLQMHFALQEAP-------------VFAAPYQVLNEPAMQASIGLFCT MUL_1404|M.ulcerans_Agy99 ALLHTDGSVLPR------------------------------------HH Mvan_4388|M.vanbaalenii_PYR-1 VVLVFDEPFWTEA---------------FDIHSDMLGIAGGAQPVSDLVN . Mb3754|M.bovis_AF2122/97 PDEILTECLTQCGLDKSNVLGWRIDHELKHLDEAEYEKVASELPPHLVSA Rv3727|M.tuberculosis_H37Rv PDEILTECLTQCGLDKSNVLGWRIDHELKHLDEAEYEKVASELPPHLVSA MMAR_2963|M.marinum_M PDEIATECLAQCGLDRSHIAGWHIDDELKHLSEADYQSLASDLPPHLASA TH_1483|M.thermoresistible__bu YEHQARDWARCTGGSVVELHSYAVTEPTDGLRDALLDRLH-ALYPETADA MSMEG_2347|M.smegmatis_MC2_155 RPTRGDPALAPAGRDLLYLLAPTPNLSSTAIDWETEGPAYAQRVVDTVAE MAV_0198|M.avium_104 PEEVQQQWEQARRG--VVPADPTVVLQIPSQNDPGLAPEGKHAASAFALW MUL_1404|M.ulcerans_Agy99 RARASWNYLVATGQDHVVVS-----YDVSRLMRIRGNRRFVVTLGGHDRV Mvan_4388|M.vanbaalenii_PYR-1 GLRFTDVPLLVGLRGGANARAREADSDQQTVGEVLAALRAPDPVGVFVTR Mb3754|M.bovis_AF2122/97 PARGQRMVNFSPLTVLMPGARHRSPGICTSVPNLLLAGEVIYSPDLTLFV Rv3727|M.tuberculosis_H37Rv PARGQRMVNFSPLTVLMPGARHRSPGICTSVPNLLLAGEVIYSPDLTLFV MMAR_2963|M.marinum_M PARGQRMVNLSPLTILLPGARDRSPRIRTEVGNLFLAGEASYSPELTFLV TH_1483|M.thermoresistible__bu GIVAERVLCRQDCPRFAPGDHAGRPGVAGPHPALALAGDGIR---IDLPV MSMEG_2347|M.smegmatis_MC2_155 RLLPELRDDAQVLQVVTPADWARQGMVAGTPFALAHTFSQTG----PFRP MAV_0198|M.avium_104 FPIEGEVDYGQAKIEMGQRVIDKITRLAPNFEDSIIRHTTFTPRHMGVMF MUL_1404|M.ulcerans_Agy99 DTRSVIAEMTYSHPLYTPESVVAQRVLPTLDDDRVVFAGAYHG------W Mvan_4388|M.vanbaalenii_PYR-1 WAADPYARGSYSFLAVGSSPADQQALAEPVADRVAFAGEATHP----EFF Mb3754|M.bovis_AF2122/97 PTMEKAACSGYLAARQIMNMVASHAAP-LRIDFRDPAPFAVLRRVDRWFW Rv3727|M.tuberculosis_H37Rv PTMEKAACSGYLAARQIMNMVASHAAP-LRIDFRDPAPFAVLRRVDRWFW MMAR_2963|M.marinum_M PTMEKAASSGYLAAHNILGVGAADAAPELRIDFNDPVPFAGLRRVDRWFW TH_1483|M.thermoresistible__bu ALMERAATTGWSAANRLLTHFGLAGHPLYTVPTRGRS--AALRRLARREV MSMEG_2347|M.smegmatis_MC2_155 GNTVRGVANAVLAGSSTVPGVGVPTALLSGRLAADRVTGTVRRTRTHHDI MAV_0198|M.avium_104 GAPGGDYCHGLLNANQVGPNRPGPRGFLGQPIPIEGLYLGSAGCHGGPGI MUL_1404|M.ulcerans_Agy99 GFHEDGAASGLRAARRLGADWPARTRPEAMLSC----------------- Mvan_4388|M.vanbaalenii_PYR-1 ATVHGAYLSGLREADRILR------------------------------- . . Mb3754|M.bovis_AF2122/97 SRRRRPP---DRSTFATPPTAMPAPSHLTDVDRSAS---- Rv3727|M.tuberculosis_H37Rv SRRRRPP---DRSTFATPPTAMPAPSHLTDVDRSAS---- MMAR_2963|M.marinum_M NRRRPPESPCDPPGAACPSENGVPHGCPTPVPHPESAPRR TH_1483|M.thermoresistible__bu RQVR------------------------------------ MSMEG_2347|M.smegmatis_MC2_155 NSVTAATADRKARMP------------------------- MAV_0198|M.avium_104 TFIPGYNAARQALTDRSG---------------------- MUL_1404|M.ulcerans_Agy99 ---------------------------------------- Mvan_4388|M.vanbaalenii_PYR-1 ----------------------------------------