For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRRSGANSPAGDSLADRWRAARPPVAGLHLDSAACSRQSFAALDAAAQHARHEAEVGGYVAAEAAAAVLD AGRAAVAALSGLPDAEVVFTTGSLHALDLLLGSWPGENRTLACLPGEYGPNLAVMAAHGFDVRPLPTLQD GRVALDDAAFMLADDPPDLVHLTVVASHRGVAQPLAMVAQLCTELKLPLVVDAAQGLGHVDCAVGADVTY ASSRKWIAGPRGVGVLAVRPELMERLRARLPAPDWMPPLTVAQQLGFGEANVAARVGFSVALGEHLACGP QAIRARLAELGDIARTVLADVSGWRVVEAVDEPSAITTLAPIDGADPAAVRAWLLSQRRIVTTYAGVERA PLELPAPVLRISPHVDNTADDLDAFAEALVAATAATSGER
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3726c | - | - | 100% (390) | hypothetical protein Mb3726c |
M. bovis AF2122 / 97 | Mb1499 | csd | 1e-11 | 26.95% (308) | cysteine desulfurase |
M. bovis AF2122 / 97 | Mb3051c | iscS | 5e-06 | 25.79% (221) | cysteine desulfurase IscS |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1319 | - | 1e-121 | 60.65% (371) | aminotransferase, class V |
M. tuberculosis H37Rv | Rv3700c | - | 0.0 | 100.00% (390) | hypothetical protein Rv3700c |
M. leprae Br4923 | MLBr_00842 | - | 8e-11 | 25.00% (328) | hypothetical protein MLBr_00842 |
M. abscessus ATCC 19977 | MAB_0373 | - | 1e-106 | 55.26% (371) | aminotransferase |
M. marinum M | MMAR_5211 | csdB | 1e-168 | 77.84% (379) | selenocysteine lyase, CsdB |
M. avium 104 | MAV_0403 | - | 1e-164 | 76.13% (377) | pyridoxal-phosphate-dependent transferase |
M. smegmatis MC2 155 | MSMEG_6246 | - | 1e-138 | 65.85% (366) | pyridoxal-phosphate-dependent transferase |
M. thermoresistible (build 8) | TH_1723 | - | 1e-112 | 65.62% (320) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4284 | csdB | 1e-167 | 77.31% (379) | selenocysteine lyase, CsdB |
M. vanbaalenii PYR-1 | Mvan_5482 | - | 1e-117 | 59.14% (372) | aminotransferase, class V |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1319|M.gilvum_PYR-GCK -MDGDAHDLEDTPLAQRWREARPPAAG---VHVDSAACSRQSVAVIEATA Mvan_5482|M.vanbaalenii_PYR-1 -----------MTLAEQWRAARPPVAG---VHVDSAACSRQSFAVIEAAA Mb3726c|M.bovis_AF2122/97 MRRSGANSPAGDSLADRWRAARPPVAG---LHLDSAACSRQSFAALDAAA Rv3700c|M.tuberculosis_H37Rv MRRSGANSPAGDSLADRWRAARPPVAG---LHLDSAACSRQSFAALDAAA MAV_0403|M.avium_104 -------MSGGTPLADTWRSARPPAAG---LHLDSAACSRQSFAVIEATA MMAR_5211|M.marinum_M ---------MTDTLADRWRAARPPAAG---LHLDSAACSRQSLEVLQAVA MUL_4284|M.ulcerans_Agy99 ---------MTDTLADRWRAARPPATG---LHLDSAACSRQSLEVLRAVA MSMEG_6246|M.smegmatis_MC2_155 -----------MMLAQQWRDARPKVAG---LHLDSGACSRQSFAVIDATT TH_1723|M.thermoresistible__bu -------------------------------------------------- MAB_0373|M.abscessus_ATCC_1997 -----------MSLRDRWRHARPPVLG---VHLDSAACSRQSIETLRAVA MLBr_00842|M.leprae_Br4923 ----MVDVFDIQAVRADFPILQETVNGKPLIWFDNAATTQKPQVVIDRLS Mflv_1319|M.gilvum_PYR-GCK QHARHEA----EVGGYVAAEAAAPVLDAGRAAVRVLAGMPDAEVVFTTGS Mvan_5482|M.vanbaalenii_PYR-1 QHARHEA----EVGGYVAAEAAAPALDAGRTAVRALTGMSDAVVHFTTGS Mb3726c|M.bovis_AF2122/97 QHARHEA----EVGGYVAAEAAAAVLDAGRAAVAALSGLPDAEVVFTTGS Rv3700c|M.tuberculosis_H37Rv QHARHEA----EVGGYVAAEAAAAVLDAGRAAVAALSGLPDAEVVFTTGS MAV_0403|M.avium_104 QHARNEA----ELGGYVAAEAAAPVLDAGRFAFTALTGMTDAEAVFTTGS MMAR_5211|M.marinum_M AHGLHEA----EVGGYVAAEAAAPVLDAGRAAVATLCGVPDARVVFTTGS MUL_4284|M.ulcerans_Agy99 AHGLHEA----EVGGYVAAEAAAPVLDAGRAAVATLCGVPDARVVFTTGS MSMEG_6246|M.smegmatis_MC2_155 AHARHEA----EVGGYVAAEAATPALDAGRAAVASLIGFAASDVVYTSGS TH_1723|M.thermoresistible__bu ------------------------VLHAGRAAVAHLVGMDAADVVFTTGS MAB_0373|M.abscessus_ATCC_1997 QHAEHEA----QIGGYVAQEAATPVLEAGRAAVRQLTGMPEAHVQFTTGA MLBr_00842|M.leprae_Br4923 YFYAHENSNIHRAAHELAARATDAYEEARETARRFIGAAKAQEIIFVRGT .* . * : . :. *: Mflv_1319|M.gilvum_PYR-GCK NNALDILLADWPGE---------RTLACLQGEFGPNLAIMARHGFEVRTL Mvan_5482|M.vanbaalenii_PYR-1 NHALDILLGDWTGA---------RTLACLPGEFGPNLAIMARHGFSIKVL Mb3726c|M.bovis_AF2122/97 LHALDLLLGSWPGEN--------RTLACLPGEYGPNLAVMAAHGFDVRPL Rv3700c|M.tuberculosis_H37Rv LHALDLLLGSWPGEN--------RTLACLPGEYGPNLAVMAAHGFDVRPL MAV_0403|M.avium_104 LHALDLLLGSWPAER--------RTLACLPGEYGPNLAVMAAHGFDRWLL MMAR_5211|M.marinum_M LHALDLLLGSWPRES--------RTLACLPGEYGPNLAVMAAHGFEVRLL MUL_4284|M.ulcerans_Agy99 LHALDLLLGSWPRES--------RTLACLPGEYGPNLAVMAAHGFEVRLL MSMEG_6246|M.smegmatis_MC2_155 NHAIDLLLSSWPGK---------RTLACLPGEYGPNLSAMAANGFQVRAL TH_1723|M.thermoresistible__bu NHALDLLLSSWPQP---------RSLACLPGEFGPNLAIMAANGFEVRAL MAB_0373|M.abscessus_ATCC_1997 ADALRTLLQAWPADSG-------RVVACLPGEFGPNLMIMNHFGFTPVWL MLBr_00842|M.leprae_Br4923 TEAINLVAYAWGGKHLQPGDEVVITHLEHHANIVPWQLLSSQTGAILKVA .*: : * .: * * Mflv_1319|M.gilvum_PYR-GCK PLEESGRLDVNAIGAALAHDPPALVHFTVLGSHSGVVQPARAMASACHGH Mvan_5482|M.vanbaalenii_PYR-1 PVDEFGRLDVNAVGAALSSHQPALVHFTVLGSHSGIVQPVRDMASACRGH Mb3726c|M.bovis_AF2122/97 PTLQDGRVALDDAAFMLADDPPDLVHLTVVASHRGVAQPLAMVAQLCTEL Rv3700c|M.tuberculosis_H37Rv PTLQDGRVALDDAAFMLADDPPDLVHLTVVASHRGVAQPLAMVAQLCTEL MAV_0403|M.avium_104 PTLADGRVALDDAALALQTDPPDLVHLTTIGSHSGVVQPVSMIARLCREL MMAR_5211|M.marinum_M PTLDDGRLALDDAAYELEEDPPELVHLTPVASHRGTVQPLAMMAELCREL MUL_4284|M.ulcerans_Agy99 PTLDDGRLALDDAAYELEEDPPELVHLTPVASHRGTVQPLAMMAELCREL MSMEG_6246|M.smegmatis_MC2_155 PVDDDGRVLVDEASHELSAHPVALVHLTALASHRGIAQPAAELVEACHNA TH_1723|M.thermoresistible__bu PVDEIGRVRPDRAEHLLRTDPPALVHLTALASHRGIAQPAARIAELCRAY MAB_0373|M.abscessus_ATCC_1997 PVDGDGRADVDGIEVFLRHEKIDLLHLTVVGSHRGTVQPAAEVVALARAA MLBr_00842|M.leprae_Br4923 PVDDAGNLLMSEFEDLLG-PRTKLVAATQVSNALGTVTQGEKIVELGHRY * *. . * *: * :.. * . :. Mflv_1319|M.gilvum_PYR-GCK GIPLIVDAAQGFAHIDVAG--IGADALYSSSRKWTAGPRGVGVLATKPGF Mvan_5482|M.vanbaalenii_PYR-1 GIPLIVDAAQGFAHLDVAG--IGADALYSSSRKWTAGPRGVGVLASRPGL Mb3726c|M.bovis_AF2122/97 KLPLVVDAAQGLGHVDCA---VGADVTYASSRKWIAGPRGVGVLAVRPEL Rv3700c|M.tuberculosis_H37Rv KLPLVVDAAQGLGHVDCA---VGADVTYASSRKWIAGPRGVGVLAVRPEL MAV_0403|M.avium_104 GLPLVVDAAQALGQVDCT---AGADVTYSSSRKWIAGPRGVGMLAVRREL MMAR_5211|M.marinum_M GLPLVVDAAQGMGQIDCA---VGADVTYSSSRKWLAGPRGVGVLAMRPEV MUL_4284|M.ulcerans_Agy99 GLPLVVDAAQGMGQIDCA---VGADVTYSSSRKWLAGPRGVGVLAMRPEV MSMEG_6246|M.smegmatis_MC2_155 GIPVVIDAAQALGHLDCN---VGADAVYSSSRKWLAGPRGVGVLAVRPEL TH_1723|M.thermoresistible__bu RVPLVIDAAQALGHLDCA---VGADAVYSSSRKWLAGPRGVGVLAIRPEL MAB_0373|M.abscessus_ATCC_1997 GVPVVVDAAQALGHIDCT---YGADAMYAPSRKWLAGPRGVGVLAVNP-V MLBr_00842|M.leprae_Br4923 GARVLIDGAQSIPHLPINVSELGADFFVFSG-HKIYGPTGIGVLYGCEDV :::*.**.: :: *** .. : ** *:*:* . Mflv_1319|M.gilvum_PYR-GCK LSEATR----------------------QRISHTEANVGMHVGFSVALGE Mvan_5482|M.vanbaalenii_PYR-1 LADDTR----------------------IRLNHAETNVGLQVGFSVAVGE Mb3726c|M.bovis_AF2122/97 MERLRARLPAPDWMP--------PLTVAQQLGFGEANVAARVGFSVALGE Rv3700c|M.tuberculosis_H37Rv MERLRARLPAPDWMP--------PLTVAQQLGFGEANVAARVGFSVALGE MAV_0403|M.avium_104 MENLHPRLAAPDWAP--------GSTVAQQLEFGEANIAARVGFSLALGE MMAR_5211|M.marinum_M LDRLTPRLAPPDWSPDS-----PSTSVAQILEFGEANIAARVGFSLAVGE MUL_4284|M.ulcerans_Agy99 LDRLTPRLAPPDWSPDS-----PSTSVAQILEFGEANIAARVGFSLAVGE MSMEG_6246|M.smegmatis_MC2_155 AERLQPRIPPSDWPIP--------MSVLEKLELGEHNAAARVGFSVAVGE TH_1723|M.thermoresistible__bu AERLCPRLPPPDWPVAR------TLRVLDRLAHGEANIAARVGFSVAVGE MAB_0373|M.abscessus_ATCC_1997 LEHLLP----------------------QWAGHVEAHVAGWVGLSVAVGQ MLBr_00842|M.leprae_Br4923 LTEMPPWQGGGNMIVDVTLERSLYQGPPNKFEAGTGNIADAVGLGEALRY : . **:. *: Mflv_1319|M.gilvum_PYR-GCK HVAAGVEAVQARLREVGAATRRALADVRGWRVLEALDEPSAITTLRPPDG Mvan_5482|M.vanbaalenii_PYR-1 YVAAGPDAVQSRLREVGAATRTALADVPGWRVVEHVTEPSAITTLQSTDG Mb3726c|M.bovis_AF2122/97 HLACGPQAIRARLAELGDIARTVLADVSGWRVVEAVDEPSAITTLAPIDG Rv3700c|M.tuberculosis_H37Rv HLACGPQAIRARLAELGDIARTVLADVSGWRVVEAVDEPSAITTLAPIDG MAV_0403|M.avium_104 YLGYGPAAVCARLAELGGLSRGVLTDVTGWAVVEEAEEPSAITTLAPTDG MMAR_5211|M.marinum_M HLEYGPALIRARLAELGAAARRVLADVDGWLVVEEVDEPSAITTLAPIDG MUL_4284|M.ulcerans_Agy99 HLEYGPALIRARLAELGAAARRVLADVDGWLVVEEVDEPSAITTLAPIDG MSMEG_6246|M.smegmatis_MC2_155 HLAAGPTAVRERLAEVGRLSRQVLAEVDGWRVVEPVDQPTAITTLESTDG TH_1723|M.thermoresistible__bu HLAAGPAAVRARLAEVGRQTHAVLAQVPGWRVVEPPDEPTAITTLEPTAG MAB_0373|M.abscessus_ATCC_1997 HLAAGPGQIQGALAERGRAARKILGELKDWRVIESVDEPSAITTLEPVGD MLBr_00842|M.leprae_Br4923 VERVGVQRIASHEQALLDYATPRLADIPGVRLVGTATEKASVLSFVLAG- * : : * :: . :: : ::: :: Mflv_1319|M.gilvum_PYR-GCK VDAQDVRARLIAEHSIVATYLGTERAPREMN--RPALRVSPHVDVTAADL Mvan_5482|M.vanbaalenii_PYR-1 IDPLDVRTRLIAEHQIVTTYLGLERAPREMS--HPALRVSPHVDVTDADL Mb3726c|M.bovis_AF2122/97 ADPAAVRAWLLSQRRIVTTYAGVERAPLELP--APVLRISPHVDNTADDL Rv3700c|M.tuberculosis_H37Rv ADPAAVRAWLLSQRRIVTTYAGVERAPLELP--APVLRISPHVDNTADDL MAV_0403|M.avium_104 ADPRAVRDWLLAERRILTTFVGVQRAPLRLT--APVLRISPHLDTTAEDL MMAR_5211|M.marinum_M ADPAAVREWLLEQRRILTTYAGIARAPQELT--APVLRVAPHVDTTAEDL MUL_4284|M.ulcerans_Agy99 ADPAAEREWLLEQRRILTTYAGIARAPQELT--APVLRVAPHVDTTAEDL MSMEG_6246|M.smegmatis_MC2_155 ADPASVRSWLIAERGIVTTACELARAPFEMR--TPVLRISPHVDVTVDEL TH_1723|M.thermoresistible__bu ADPAAVR-RTLIERGIVTTAAEPARAPFELR--TPVLRLSPHIDTTTAEL MAB_0373|M.abscessus_ATCC_1997 IDVIAVRARLIEEHAIVTTGAEMVRAPFEMT--KPVLRVSPHVDGTDEEL MLBr_00842|M.leprae_Br4923 HEPLEVGKALNAEGIAVRAGHHCAQPVLRRLGLEATVRPSFAFYNTYEEI : : : : :. . ..:* : . * :: Mflv_1319|M.gilvum_PYR-GCK GRVAEALAEVTPG----- Mvan_5482|M.vanbaalenii_PYR-1 AALADALATVTR------ Mb3726c|M.bovis_AF2122/97 DAFAEALVAATAATSGER Rv3700c|M.tuberculosis_H37Rv DAFAEALVAATAATSGER MAV_0403|M.avium_104 ETFAEALIAATAATSA-- MMAR_5211|M.marinum_M ENFAEALIEATAATTAT- MUL_4284|M.ulcerans_Agy99 ENFAEALIEATAATTAT- MSMEG_6246|M.smegmatis_MC2_155 EQFAAALREAP------- TH_1723|M.thermoresistible__bu EQFAAALADVTAALR--- MAB_0373|M.abscessus_ATCC_1997 ELLAGVLASARRV----- MLBr_00842|M.leprae_Br4923 DVFINVVRRIAEGGTNIG . .: