For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTILILTDNVHAHALAVDLQARHGDMDVYQSPIGQLPGVPRCDVAERVAEIVERYDLVLSFHCKQRFPAA LIDGVRCVNVHPGFNPYNRGWFPQVFSIIDGQKVGVTIHEIDDQLDHGPIIAQRECAIESWDSSGSVYAR LMDIERELVLEHFDAIRDGSYTAKSPATEGNLNLKKDFEQLRRLDLNERGTFGHFLNRLRALTHDDFRNA WFVDASGRKVFVRVVLEPEKPAEA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3438c | - | - | 100% (234) | hypothetical protein Mb3438c |
M. bovis AF2122 / 97 | Mb0981 | purN | 2e-05 | 26.32% (133) | phosphoribosylglycinamide formyltransferase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1874 | purN | 4e-06 | 25.32% (154) | phosphoribosylglycinamide formyltransferase |
M. tuberculosis H37Rv | Rv3404c | - | 1e-137 | 100.00% (234) | hypothetical protein Rv3404c |
M. leprae Br4923 | MLBr_00160 | purN | 1e-07 | 32.95% (88) | phosphoribosylglycinamide formyltransferase |
M. abscessus ATCC 19977 | MAB_1063 | purN | 5e-08 | 27.08% (144) | phosphoribosylglycinamide formyltransferase |
M. marinum M | MMAR_4543 | purN | 3e-07 | 31.82% (88) | 5'-phosphoribosylglycinamide formyltransferase PurN |
M. avium 104 | MAV_1080 | purN | 2e-06 | 31.82% (88) | phosphoribosylglycinamide formyltransferase |
M. smegmatis MC2 155 | MSMEG_0014 | - | 4e-09 | 30.16% (126) | Formyl transferase |
M. thermoresistible (build 8) | TH_1361 | purN | 4e-07 | 32.56% (86) | PROBABLE 5'-PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE PURN |
M. ulcerans Agy99 | MUL_4713 | purN | 3e-07 | 31.82% (88) | phosphoribosylglycinamide formyltransferase |
M. vanbaalenii PYR-1 | Mvan_4857 | purN | 2e-07 | 27.56% (156) | phosphoribosylglycinamide formyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4543|M.marinum_M -------MQEP---------VRVPPSAPARLVVLASGTGSLLNSLLDAAV MUL_4713|M.ulcerans_Agy99 -------MQEP---------VRVPPSAPARLVVLASGTGSLLNSLLDAAV MLBr_00160|M.leprae_Br4923 -------MQEP---------LCVSPSAPSRVVVLASGTGSLLGSLIDASV MAV_1080|M.avium_104 -------MVEP---------LHVPPNAPARVVVLASGTGSLLSSLIDAAV Mflv_1874|M.gilvum_PYR-GCK -------MQSEAGGGEQQFHLRVPPSAPARVVVLASGAGSLLASLLSSAV Mvan_4857|M.vanbaalenii_PYR-1 -------MQPEAGGREERCVLRVPPSAPARLVVLASGTGSLLASLLKSAV TH_1361|M.thermoresistible__bu ----------------------VPPSAPARVVVLASGTGSLLAALLEAAV MAB_1063|M.abscessus_ATCC_1997 -------MSVPSQS------VEIAPSAPARVVVLASGTGTLLRSLLDAAT Mb3438c|M.bovis_AF2122/97 -----------------MTILILTDNVHAHALAVDLQARHGDMDVYQSPI Rv3404c|M.tuberculosis_H37Rv -----------------MTILILTDNVHAHALAVDLQARHGDMDVYQSPI MSMEG_0014|M.smegmatis_MC2_155 MFPVRVVMFGYQTWGHRTLQALLKSRHEVCLVVTHPTSDHAYESIWADSV : :. : : . MMAR_4543|M.marinum_M ADYP-------ARIVAVGVDRDCRATEIAAQASVPAFTVR----VSDHPS MUL_4713|M.ulcerans_Agy99 ADYP-------ARIVAVGVDRDCRATEVAAQASVPAFTVR----VSDHPS MLBr_00160|M.leprae_Br4923 GNYP-------ARVVAVGVDRDCGATKIAKAASVPTFTVR----LADPPG MAV_1080|M.avium_104 GDYP-------ARVVAVGADRDCLATQIAAAASLPSFTVR----LGDHPD Mflv_1874|M.gilvum_PYR-GCK GDFP-------ARVVAVGTDRPCAALDIAAKADVPTFTVA----LTDHPD Mvan_4857|M.vanbaalenii_PYR-1 GDYP-------ARVVAVGTDRVCAALDIASGAAIPTFTVP----LSEYPD TH_1361|M.thermoresistible__bu GDYP-------ARVVAVGTDRDCAALEIAAAANVPTFTVR----LRDYPD MAB_1063|M.abscessus_ATCC_1997 GDFP-------ARIVAVGTDRPCPALDIAADAQLPSYMVR----LGDYDS Mb3438c|M.bovis_AF2122/97 GQLPGVPRCDVAERVAEIVERYDLVLSFHCKQRFPAALIDGVRCVNVHPG Rv3404c|M.tuberculosis_H37Rv GQLPGVPRCDVAERVAEIVERYDLVLSFHCKQRFPAALIDGVRCVNVHPG MSMEG_0014|M.smegmatis_MC2_155 EDLARG-----AGIEVLLAKRPTPELVERVRELAPDVGVAN--NWRTRLP : . * . ..* * : MMAR_4543|M.marinum_M RDAWDAAITAAAAAHSPDLVVSAGFMRILG------------PQFLSKFH MUL_4713|M.ulcerans_Agy99 RDAWNAAITAATAAHSPDLVVSAGFMRILG------------PQFLSKFH MLBr_00160|M.leprae_Br4923 RDAWDAKITEAVASYKPDLVVLAGFMRILG------------PQFLARFF MAV_1080|M.avium_104 RAAWDAAITEATAAHSPDLVVSAGFMKILG------------PQFLSRFY Mflv_1874|M.gilvum_PYR-GCK RTAWDAAITEATAAHAPDIVVAAGFMKILG------------AGFLSRFP Mvan_4857|M.vanbaalenii_PYR-1 RAAWDAALADATAAHRPDLVVSAGFMKILG------------PQFLSTFP TH_1361|M.thermoresistible__bu RQAWDAAITEAVAAHQPDLVVSAGFMKILG------------PHFLSRFQ MAB_1063|M.abscessus_ATCC_1997 REQWDAAIAEATAVHRPDLVVSAGFMKILG------------PQFLSQFL Mb3438c|M.bovis_AF2122/97 FNPYNRGWFPQVFSIIDGQKVGVTIHEIDD------------QLDHGPII Rv3404c|M.tuberculosis_H37Rv FNPYNRGWFPQVFSIIDGQKVGVTIHEIDD------------QLDHGPII MSMEG_0014|M.smegmatis_MC2_155 RELFSIPKYGTVNLHDSLLPKFTGFSPVIWSLISGAGQTGLTAHFMDDEL :. . . : : MMAR_4543|M.marinum_M QR---ILNTHPALLPAFPGAHGVADALAYG-VKVTGCTVHLVDAGMDTGP MUL_4713|M.ulcerans_Agy99 QR---ILNTHPALLPAFPGAHGVADALAYG-VKVTGCTVHLVDAGMDTGP MLBr_00160|M.leprae_Br4923 GR---IVNTHPALLPAFPGTHGVADALAYG-VKVTGATVHLVDAGTDTGP MAV_1080|M.avium_104 GR---VINTHPALLPAFPGAHGVAEALAYG-VKVTGCTVHLVDAGTDTGP Mflv_1874|M.gilvum_PYR-GCK GR---VLNSHPALLPAFPGAHAVRDALAYG-VRVTGCTVHLVDAGTDTGP Mvan_4857|M.vanbaalenii_PYR-1 GR---VLNTHPALLPAFPGAHAVRDALAYG-VRVTGCTVHLVDAGTDTGP TH_1361|M.thermoresistible__bu GR---VLNTHPALLPAFPGAHAVADALSYG-VQVTGCTVHLVDAGTDTGP MAB_1063|M.abscessus_ATCC_1997 GR---VINTHPALLPSFPGAHAVPEALAHG-VKITGCTVHLVDAGMDTGP Mb3438c|M.bovis_AF2122/97 AQRECAIESWDSSGSVYARLMDIERELVLEHFDAIRDGSYTAKSPATEGN Rv3404c|M.tuberculosis_H37Rv AQRECAIESWDSSGSVYARLMDIERELVLEHFDAIRDGSYTAKSPATEGN MSMEG_0014|M.smegmatis_MC2_155 DTGDILLQRSVEITPTSTGTSLVYDTLDLIPDVLEDALDAIENGTATPVP :: . . : * .. MMAR_4543|M.marinum_M ILAQQAIAVLDGDDEAT-----------------------------LHER MUL_4713|M.ulcerans_Agy99 ILAQQAIAVLDGDDEAT-----------------------------LHER MLBr_00160|M.leprae_Br4923 ILAQQSVPVLDGDDTAA-----------------------------LHER MAV_1080|M.avium_104 ILAQQSVPVLDGDDEQT-----------------------------LHER Mflv_1874|M.gilvum_PYR-GCK IVAQQAVAVYDDDDESA-----------------------------LHER Mvan_4857|M.vanbaalenii_PYR-1 IVAQQAVTVLDGDDESS-----------------------------LHER TH_1361|M.thermoresistible__bu IIAQRAVPVLKGDDEAT-----------------------------LHER MAB_1063|M.abscessus_ATCC_1997 ILAQQAVPVDRDDDEAS-----------------------------LHER Mb3438c|M.bovis_AF2122/97 LNLKKDFEQLRRLDLNERGTFGH-----------------------FLNR Rv3404c|M.tuberculosis_H37Rv LNLKKDFEQLRRLDLNERGTFGH-----------------------FLNR MSMEG_0014|M.smegmatis_MC2_155 QDLSQRTFFHKRSDRDSLVDWSWPAADIERFIRALSDPYPNAYTYFRGER .: * :* MMAR_4543|M.marinum_M IKVVERKLLVDVVAGIAT--------GGVTVIGRKAMIGRKATIG----- MUL_4713|M.ulcerans_Agy99 IKVVERKLLVDVVAGIAA--------GGVTVIGRKAMIGRKATIG----- MLBr_00160|M.leprae_Br4923 IKVIERRLLVDVVAVIAT--------GGVTLVGRKATIGRKATIE----- MAV_1080|M.avium_104 IKVTERKLLVDVVAAIAT--------GGLTLVGRKATIG----------- Mflv_1874|M.gilvum_PYR-GCK IKVIERRLLVDVVAAVAS--------RGVTWTGRKATLG----------- Mvan_4857|M.vanbaalenii_PYR-1 IKVIERQLLVDVVAAMAT--------RGMTWTGRKVNLG----------- TH_1361|M.thermoresistible__bu IKVVERQLLVEVLAALAT--------RGVTWSGRKATIG----------- MAB_1063|M.abscessus_ATCC_1997 IKVVERTLLVDVLAAVAT--------KGLTWNGRRASIK----------- Mb3438c|M.bovis_AF2122/97 LRALTHDDFRNAWFVDAS--------GRKVFVRVVLEPEKPAEA------ Rv3404c|M.tuberculosis_H37Rv LRALTHDDFRNAWFVDAS--------GRKVFVRVVLEPEKPAEA------ MSMEG_0014|M.smegmatis_MC2_155 LRLISAHVSRCTYGGTPGRVFIEENGGMVIVAGADAFRGRSPGLVLDVVR :: . . MMAR_4543|M.marinum_M ----------------------------- MUL_4713|M.ulcerans_Agy99 ----------------------------- MLBr_00160|M.leprae_Br4923 ----------------------------- MAV_1080|M.avium_104 ----------------------------- Mflv_1874|M.gilvum_PYR-GCK ----------------------------- Mvan_4857|M.vanbaalenii_PYR-1 ----------------------------- TH_1361|M.thermoresistible__bu ----------------------------- MAB_1063|M.abscessus_ATCC_1997 ----------------------------- Mb3438c|M.bovis_AF2122/97 ----------------------------- Rv3404c|M.tuberculosis_H37Rv ----------------------------- MSMEG_0014|M.smegmatis_MC2_155 TDDGIDHSALDYFGHGGGYLTATPEFATV