For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKRAGVSVGALFRHFETMGDFMAATAYEVLRRQ LETFTKQVAEIPADRPALPAALTILRDITAGSTNAVLYELMVAARTDEKLKETLQNVLGQYSAKIHDAAR ALPGAESFPEETFPVIVALMTNVFDGAAIVRGVLPQPELEEQRIPMLTALLTAGL
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2936c | - | - | 100% (195) | TetR family transcriptional regulator |
| M. bovis AF2122 / 97 | Mb3192c | - | 9e-06 | 22.95% (183) | TetR family transcriptional regulator |
| M. bovis AF2122 / 97 | Mb0335 | - | 2e-05 | 27.27% (176) | TetR/AcrR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_3251 | - | 1e-06 | 22.64% (106) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv2912c | - | 1e-104 | 100.00% (195) | TetR family transcriptional regulator |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0681 | - | 1e-43 | 48.40% (188) | putative HTH-type transcriptional regulator |
| M. marinum M | MMAR_1796 | - | 2e-91 | 86.15% (195) | TetR family transcriptional regulator |
| M. avium 104 | MAV_3767 | - | 1e-82 | 79.49% (195) | transcriptional regulator, TetR family protein |
| M. smegmatis MC2 155 | MSMEG_6139 | - | 9e-69 | 66.84% (196) | putative HTH-type transcriptional regulator |
| M. thermoresistible (build 8) | TH_2719 | - | 3e-06 | 26.43% (140) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_2044 | - | 5e-90 | 85.13% (195) | TetR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_2337 | - | 1e-10 | 28.80% (125) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2936c|M.bovis_AF2122/97 ----------MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKR
Rv2912c|M.tuberculosis_H37Rv ----------MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKR
MMAR_1796|M.marinum_M ----------MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKR
MUL_2044|M.ulcerans_Agy99 ----------MARTQQQRREETVARLLQASIDTIVGVGYARASAAIITKR
MAV_3767|M.avium_104 ----------MARTQQQRREETVARLLDASIATIIEVGYARASAAVITKR
MSMEG_6139|M.smegmatis_MC2_155 ----------MARTQQQRREETVARLLDASIQTIIDVGYARASAAVIARR
MAB_0681|M.abscessus_ATCC_1997 ----MIYGDLVSPTQAERRESTIARLLDSGIDTIAELGYSRASVQRIAKR
Mvan_2337|M.vanbaalenii_PYR-1 MRTGVERAATRRRTQAERTAAMRTRLLDATVECLVTYGYAGTTTPRIVEI
TH_2719|M.thermoresistible__bu ----------MASRRAQISEESRRLLIAAATELFAEQGFRRTTFADIAER
Mflv_3251|M.gilvum_PYR-GCK MSAETRSSGRRKLPKQERSREMVAKIVQTTAALLIKTEPEQVTTNLIADR
: : :: : : .: *.
Mb2936c|M.bovis_AF2122/97 AGVSVGALFRHFETMGDFMAATAYEVLRRQLETFTKQVAEIPADRP--AL
Rv2912c|M.tuberculosis_H37Rv AGVSVGALFRHFETMGDFMAATAYEVLRRQLETFTKQVAEIPADRP--AL
MMAR_1796|M.marinum_M AGVSVGALFRHFETMGDFMAATAYEVLRRQLDIFTKQVAEIPADRP--AL
MUL_2044|M.ulcerans_Agy99 AGVSVGALFRHFETMGDFMAATAYEVLRRQLDIFTKQVAEIPADRP--AL
MAV_3767|M.avium_104 AGVSVGALFRHFDTMGDFMAATASEVLRRQLESFTKRVAEIPADQP--VL
MSMEG_6139|M.smegmatis_MC2_155 AQVSDGALFRHFPTMGDFMAATAHEVMRRQLEVFTKRIAEIPAEEP--PL
MAB_0681|M.abscessus_ATCC_1997 AGLSYGALFRHFPTVGDFMAEVARETLRRQLATVRAQFDRAGDRLA--EF
Mvan_2337|M.vanbaalenii_PYR-1 AGVTRGAQVHHFRSKEDLVVAAIEHLAEQRIQAAIRQNGRLLSSPD--PV
TH_2719|M.thermoresistible__bu SGISRGSIPWHFGNKD--------GLLRAVIEDFIAGVIELDASEQ--TL
Mflv_3251|M.gilvum_PYR-GCK AGISKGSIYQYFSDKEEIIEAAVEHLAAQQAPEIEEMLRSVTMSRPEVAM
: :: *: :* .
Mb2936c|M.bovis_AF2122/97 PAALTILRDITAGSTNAVLYELMVAAR-TDEKLKETLQNVLGQYSAKIHD
Rv2912c|M.tuberculosis_H37Rv PAALTILRDITAGSTNAVLYELMVAAR-TDEKLKETLQNVLGQYSAKIHD
MMAR_1796|M.marinum_M EAALAILRDITAGATNAVLYELMIAAR-TDDKLKETLQHVLGQYRAKIYD
MUL_2044|M.ulcerans_Agy99 EAALAILRDITAGATNAVLYELMIAAR-TDDKLKETLQHVLGQYRAKIYD
MAV_3767|M.avium_104 EAVLGILRDLTSGPVNAVIYELTVAAR-TDEKLRETLQHELAQYAAKIDE
MSMEG_6139|M.smegmatis_MC2_155 QAVLTILRDVTGNDTNTVMYELLIAAR-TDEKLRVTLQEVLTEYAANIYE
MAB_0681|M.abscessus_ATCC_1997 EDVMAVMRSLKEEPINAVLYELMVAAR-TDEQLRETLQVAVAEYGAQMVE
Mvan_2337|M.vanbaalenii_PYR-1 PRVLDFLWESHQGDMFVATIELWVAAR-TDDVLAREVARVEPMVNSTLVA
TH_2719|M.thermoresistible__bu SEGLDRIRDYVRRPTTRLLITLVAEAVEPDSPVHAFYAQLHDTLRKWLSD
Mflv_3251|M.gilvum_PYR-GCK ESSIDILIDFTIANRRLIRYLAERPDHVRTFEAISGLNATLLAMATLHMG
: : .
Mb2936c|M.bovis_AF2122/97 AARALPGAESFPEET----FPVIVALMTNVFDGAAIVRGVLPQPELEEQR
Rv2912c|M.tuberculosis_H37Rv AARALPGAESFPEET----FPVIVALMTNVFDGAAIVRGVLPQPELEEQR
MMAR_1796|M.marinum_M AARTLPGAEGFPEET----FPAIVAVLTNVFDGAAIVGAVLPQPDIDEQR
MUL_2044|M.ulcerans_Agy99 AARTLPGAEGFPEGT----FPAIVAVLTNVFDGAAIVGAVLPQPDIDEQR
MAV_3767|M.avium_104 VSRALPGVEGFPADT----FPVLVALMRNVFDGAAVVEGVLPQPEIAAQR
MSMEG_6139|M.smegmatis_MC2_155 TARTIPGFEQFPQNESRHEAMAAVALLVNTFDGAAIIRPVLPQPDLEDAR
MAB_0681|M.abscessus_ATCC_1997 LARSVPGTDRLSESE----LITLVFMITDMFDGEALVQTLRPYPELVAGR
Mvan_2337|M.vanbaalenii_PYR-1 AIDQLL-PNTFSHKR----IRNAIFTAMDALRGILVVSFVDRDLDLARRR
TH_2719|M.thermoresistible__bu WIDDKDIPPGVSREN-------FVTVLIGAVIGVHQQWRVAPHHVDLDAC
Mflv_3251|M.gilvum_PYR-GCK HYRDQYRDELSPRALAWLFFNMAVATTLRYIEADDPISLDELRSGLKFAS
. : . .
Mb2936c|M.bovis_AF2122/97 IPMLTALLTAGL----------
Rv2912c|M.tuberculosis_H37Rv IPMLTALLTAGL----------
MMAR_1796|M.marinum_M IPVLAALLSAAVPDTAP-----
MUL_2044|M.ulcerans_Agy99 IPVLAALLSAAVPDTAP-----
MAV_3767|M.avium_104 IPVLTALLNAALPQ--------
MSMEG_6139|M.smegmatis_MC2_155 IALLSSLFSR------------
MAB_0681|M.abscessus_ATCC_1997 DELLAKLLRGYRPDA-------
Mvan_2337|M.vanbaalenii_PYR-1 WDRACVDLGSALADALKAAPSE
TH_2719|M.thermoresistible__bu FAALKQLASGD-----------
Mflv_3251|M.gilvum_PYR-GCK TGLLAGAVSGGHVGEPGPS---