For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRSKIPDLQRALEGRFDDHHALMCRLHLAHLDQLDAMIGALDEQIEQLMHPFCARRELIASIPGIGVGAS ATVISEIGADPAAWFPSAEHLASWVRLCPGNHESAGKRHHGARRKGNQHLQPVLVECAWAAVRTDGYLRE YYRRQVRKFGGFRSPAANKKAIIAVAHKLIVIIWHVLATGRPYQDLGADYFTTRMDPDKERRRLVAKLEA QGLGVTLEPAA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2199c | - | - | 100% (221) | transposase |
M. bovis AF2122 / 97 | Mb2447c | - | e-128 | 99.55% (221) | transposase |
M. bovis AF2122 / 97 | Mb2037 | - | 1e-08 | 25.12% (203) | transposase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4200 | - | 2e-07 | 30.97% (155) | transposase IS116/IS110/IS902 family protein |
M. tuberculosis H37Rv | Rv2177c | - | 1e-128 | 99.55% (221) | transposase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_3782 | - | 1e-05 | 25.81% (186) | transposase |
M. avium 104 | MAV_0496 | - | 7e-05 | 29.56% (159) | transposase IS116/IS110/IS902 |
M. smegmatis MC2 155 | MSMEG_4550 | - | 4e-07 | 29.49% (156) | transposase |
M. thermoresistible (build 8) | TH_3017 | - | 5e-09 | 30.26% (152) | PUTATIVE transposase |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4882 | - | 7e-43 | 43.05% (223) | transposase IS116/IS110/IS902 family protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3782|M.marinum_M --------MPT--VWAGVDTGKRTHHCVVLDRNGGVLLSRPVDNDETALL TH_3017|M.thermoresistible__bu ---------------------------VVIDAQGKRLLSQRVANDEATLL Mflv_4200|M.gilvum_PYR-GCK --------MTTGQVWAGVDVGKEHHWVCAVDDSGKVVLSRRLVNDEQPIR MSMEG_4550|M.smegmatis_MC2_155 --------MAAGQVWAGVDVGKEHHWVCVVDDSGKVVLSRRLVNDEQPIR Mb2199c|M.bovis_AF2122/97 -------------------------------------------------- Rv2177c|M.tuberculosis_H37Rv -------------------------------------------------- Mvan_4882|M.vanbaalenii_PYR-1 MLVESEDSEQIIARVAALDIGKAELVCCVRVPGRGTRRLQEVSTHSTMAR MAV_0496|M.avium_104 -----------------------------------MVARGRVSNDAAGFA MMAR_3782|M.marinum_M ELIEAVVGVAAGREVCWATDLNAGGAAMLITLLAAHDQQLLYIPGRIVHH TH_3017|M.thermoresistible__bu KLISTVATMADGGEVTWAIDLNAGGAALLITLLIAADQRLLYIPGRTVHH Mflv_4200|M.gilvum_PYR-GCK ELVAEIDELAER--VSWTVDLTTVYAALVLTVLADAGKTVRYLAGRAVWQ MSMEG_4550|M.smegmatis_MC2_155 ELVAEIDELAER--VLWAVDLTTVYAALLLTVLADAGKTVRYLAGRAVWQ Mb2199c|M.bovis_AF2122/97 -------------------------------------------------- Rv2177c|M.tuberculosis_H37Rv -------------------------------------------------- Mvan_4882|M.vanbaalenii_PYR-1 SLTELANHLVESGVQRVVMEATSDYWKPVFYLLEAHGLDPWLVNARDVKH MAV_0496|M.avium_104 ALLTLLAEAGDSAAHPIPVGIETDRG-LWVAALRETGRVIYPINPLAASR MMAR_3782|M.marinum_M AAATYRG-DGKTDAKNARIIADQA---RMR-TDLQPVRRADPIATDLRLL TH_3017|M.thermoresistible__bu ASGSYRG-EGKTDAKDAAVIADQA---RMR-RDLQPLRPGDDITVELRIL Mflv_4200|M.gilvum_PYR-GCK ASATYRGGEAKTDAKDARVIADQA---RMRGQDLPVLHPDDDLISELRML MSMEG_4550|M.smegmatis_MC2_155 ASATYRGGEAKTDAKDARVIADQS---RMRGQDLPVLHPNDDLISELRML Mb2199c|M.bovis_AF2122/97 -------------------------------------------------- Rv2177c|M.tuberculosis_H37Rv -------------------------------------------------- Mvan_4882|M.vanbaalenii_PYR-1 LPGRPKT-----DVLDAVWLAKLAERQ-----MLRPSFVPPPPIRQLRDL MAV_0496|M.avium_104 YRARHAVSGAKSDATDAVLLANIVR---TDAAAHRPLPADTELAQAIRVL MMAR_3782|M.marinum_M TSRRTDVVCDRVRAINRLRQTLLEYFPPLERAFDYSKS-----KAALTLL TH_3017|M.thermoresistible__bu TSRRTDLVADRTRTINRLRAQLLEYFPALERAFDYSTS-----KAALLLL Mflv_4200|M.gilvum_PYR-GCK TGHRADLVADRTRTINRLRQQLVAVCPALERAAQPSQD-----RGWVILL MSMEG_4550|M.smegmatis_MC2_155 TGHRADLVADRTRTINRLRQQLVAVCPALERAAQLSQD-----RGWVVLL Mb2199c|M.bovis_AF2122/97 -------------------------------------------------- Rv2177c|M.tuberculosis_H37Rv -------------------------------------------------- Mvan_4882|M.vanbaalenii_PYR-1 TRYRIDLVATRTAERNRVEKLLEDACIKLSVVAS----------DIFGVS MAV_0496|M.avium_104 ARAQQDAVWARQQIGNQIRDLLKDFYPAAIAAFAGLPEGGLARADARTIL MMAR_3782|M.marinum_M SRYQTPDSLRRIGPTRLATWLKARGCRNSATVAQTAVQAAQTQHTTLPTQ TH_3017|M.thermoresistible__bu TGYQTPDGLRRAGAARLAVWLGKRKARNADAVAAKALQAAHAQHTVIPGQ Mflv_4200|M.gilvum_PYR-GCK ARYQRPKAIRQSGVSRLTKVLTDAGVRNAASIAAAAVAAVKTQTMRLPGE MSMEG_4550|M.smegmatis_MC2_155 ARYQRPKAIRQSGVSRLTKVLTDAGVRNAASIAGAAVAAVKTQTVRLPGE Mb2199c|M.bovis_AF2122/97 -------------------------MRSKIPDLQRALEGRFDDHHAL--- Rv2177c|M.tuberculosis_H37Rv -------------------------MRSKIPDLQRALEGRFDDHHAL--- Mvan_4882|M.vanbaalenii_PYR-1 GRAMMAALIAGERDPKVLAQLARSRMRTKIGRLEEAFNGHFNAHHGF--- MAV_0496|M.avium_104 AAAPTPTQAATLTPARLRRLLTKAGRRRHLDRDIERLRAVFTDTYLHQPP * . . MMAR_3782|M.marinum_M TVGAQLVPRLAAEITTIDAELAHVDNEITARFA---DHDSAEILTSMPGF TH_3017|M.thermoresistible__bu QLAAAMVARLAKEVMALDTEIGDTDAMIEERFH---RHRHAEIIVSMSGF Mflv_4200|M.gilvum_PYR-GCK EVAAGLIADLAREVIALDDRIKTTDADIEGRFR---RHPLAEVITSMPGI MSMEG_4550|M.smegmatis_MC2_155 EVAAGLVADLAREVIALDDRIKTTDADIEGRFR---RHPLAEVITSMPGM Mb2199c|M.bovis_AF2122/97 -----MCRLHLAHLDQLDAMIGALDEQIEQLMHP--FCARRELIASIPGI Rv2177c|M.tuberculosis_H37Rv -----MCRLHLAHLDQLDAMIGALDEQIEQLMHP--FCARRELIASIPGI Mvan_4882|M.vanbaalenii_PYR-1 -----LLTRMLARLDGIDADIAVLDEQIEVYLAP--FAAAAARLDEIPGI MAV_0496|M.avium_104 AVENAMGIQLAALLRQLEAACTAADELAEAAIAHFEQHPDAKIITSFPGL : : :: * : : .:.*: MMAR_3782|M.marinum_M GPVLAATFLAQIGGNLDGFD-TVDRLACVAGLAPVPRDSGRISGNLHRPR TH_3017|M.thermoresistible__bu GVTLGAEFLAATGGDMSAFD-SVDRLAGVAGLAPVPRDSGRISGNLQRPR Mflv_4200|M.gilvum_PYR-GCK GFRLGAEFLAAVG-DPALIG-SADQLAAWAGLAPVSRDSGKRTGRLHTPK MSMEG_4550|M.smegmatis_MC2_155 GFRLGAELLAAVG-DPALIG-SADQLAAWAGLAPVSRDSRKRTGRLHTPK Mb2199c|M.bovis_AF2122/97 GVGASATVISEIGADPAAWFPSAEHLASWVRLCPGNHESAGKRHHGARR- Rv2177c|M.tuberculosis_H37Rv GVGASATVISEIGADPAAWFPSAEHLASWVRLCPGNHESAGKRHHGARR- Mvan_4882|M.vanbaalenii_PYR-1 GAVAAAIILAEIGTD-MSVFPTAGHLCSWAKFSPGIQSSAGKTKGTASTG MAV_0496|M.avium_104 GMLAGARVLAEIGDDRTRFA-DARGLKAFAGSAPITRASGKKTVVLHRH- * .* .:: * : . * . .* : * MMAR_3782|M.marinum_M RFNRRLLRPCYLAALSSLKNSPASRTFYDRKRAEGK------SHKQALIA TH_3017|M.thermoresistible__bu RYNRRLLRVCYLSALSSIRSDPASRTYYNRKRAEGK------RHSQAVLA Mflv_4200|M.gilvum_PYR-GCK RYSRRLRRVMYMSALTAIRCDPDSKAYYQRKRDEGK------RPIPATIC MSMEG_4550|M.smegmatis_MC2_155 RYSRRLRRVMYMSALTAIRCDPDSKAYYQRKRDEGK------RPIPATIC Mb2199c|M.bovis_AF2122/97 KGNQHLQPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSPAANKKAIIA Rv2177c|M.tuberculosis_H37Rv TGNQHLQPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSPAANKKAIIA Mvan_4882|M.vanbaalenii_PYR-1 HGNRYLAQILGEAAIAASRTDTFLGQRYRRIARRRG-------NKRALVA MAV_0496|M.avium_104 IKNRRLAAVGPIWALGSLRASPGARRHYDARRAAGD------WNHQAQRH .: * * : : . * * MMAR_3782|M.marinum_M LARRRINVIWAMLRD-------------HTHYHEPDLVNTPLAA------ TH_3017|M.thermoresistible__bu LARRRLNVLWAMLRD-------------HTTYQPTTPTAAAAA------- Mflv_4200|M.gilvum_PYR-GCK LARRRTNVLYALIRD-------------NRTWQPDSPPVTAAA------- MSMEG_4550|M.smegmatis_MC2_155 LARRRTNVLYALIRD-------------NRTWQPESPPNIAAA------- Mb2199c|M.bovis_AF2122/97 VAHKLIVIIWHVLAT-GRPYQDLGADYFTTRMDPDKERRRLVAKLEAQGL Rv2177c|M.tuberculosis_H37Rv VAHKLIVIIWHVLAT-GRPYQDLGADYFTTRMDPDKERRRLVAKLEAQGL Mvan_4882|M.vanbaalenii_PYR-1 VGRSILVIIWHLLTDPDATFIDLGPDHYTKHLNPETKRRNHIRQLEALGY MAV_0496|M.avium_104 LFNKFLGQLHHCLQTGRLYNEHLAFPLNRPGFDGGSCYWISTSGWSVRFV : . : : . MMAR_3782|M.marinum_M -------- TH_3017|M.thermoresistible__bu -------- Mflv_4200|M.gilvum_PYR-GCK -------- MSMEG_4550|M.smegmatis_MC2_155 -------- Mb2199c|M.bovis_AF2122/97 GVTLEPAA Rv2177c|M.tuberculosis_H37Rv GVTLEPAA Mvan_4882|M.vanbaalenii_PYR-1 TVTLTPAA MAV_0496|M.avium_104 A-------