For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3017 | - | - | 100% (384) | transposase |
| M. thermoresistible (build 8) | TH_2233 | - | 2e-32 | 30.55% (383) | Transposase IS116/IS110/IS902 family protein |
| M. thermoresistible (build 8) | TH_3366 | - | 7e-26 | 28.69% (373) | PUTATIVE transferase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3360 | - | 1e-21 | 28.86% (350) | transposase |
| M. gilvum PYR-GCK | Mflv_4200 | - | 2e-99 | 52.22% (383) | transposase IS116/IS110/IS902 family protein |
| M. tuberculosis H37Rv | Rv0797 | - | 6e-22 | 29.14% (350) | IS1547 transposase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_3782 | - | 1e-135 | 64.58% (384) | transposase |
| M. avium 104 | MAV_1059 | - | 1e-22 | 28.41% (352) | putative transposase |
| M. smegmatis MC2 155 | MSMEG_4550 | - | 4e-98 | 52.08% (384) | transposase |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0416 | - | 2e-99 | 52.22% (383) | transposase IS116/IS110/IS902 family protein |
CLUSTAL 2.0.9 multiple sequence alignment
TH_3017|M.thermoresistible__bu -------------------VVIDAQGKRLLSQRVANDEATLLKLISTVAT
MMAR_3782|M.marinum_M --MPTVWAGVDTGKRTHHCVVLDRNGGVLLSRPVDNDETALLELIEAVVG
Mflv_4200|M.gilvum_PYR-GCK MTTGQVWAGVDVGKEHHWVCAVDDSGKVVLSRRLVNDEQPIRELVAEIDE
Mvan_0416|M.vanbaalenii_PYR-1 MTTGQVWAGVDVGKEHHWVCAVDDSGKVVLSRRLVNDEQPIRELVAEIDE
MSMEG_4550|M.smegmatis_MC2_155 MAAGQVWAGVDVGKEHHWVCVVDDSGKVVLSRRLVNDEQPIRELVAEIDE
Mb3360|M.bovis_AF2122/97 ----MVVVGTDAHKYSHTFVATDEVGR-QLGEKTVKATTAGHATAIMWAR
Rv0797|M.tuberculosis_H37Rv ----MVVVGTDAHKYSHTFVATDEVGR-QLGEKTVKATTAGHATAIMWAR
MAV_1059|M.avium_104 ----MVVVGADVHKHTHTFVAVDEVGR-KLGEKTVKALTSGHAEAVMWAR
. * * *.. : .
TH_3017|M.thermoresistible__bu MADGGEVTWAIDLNAGGAALLITLLIAADQRLLYIPGRTVHHASGSYRG-
MMAR_3782|M.marinum_M VAAGREVCWATDLNAGGAAMLITLLAAHDQQLLYIPGRIVHHAAATYRG-
Mflv_4200|M.gilvum_PYR-GCK LAER--VSWTVDLTTVYAALVLTVLADAGKTVRYLAGRAVWQASATYRGG
Mvan_0416|M.vanbaalenii_PYR-1 LAER--VSWTVDLTTVYAALVLTVLADAGKTVRYLAGRAVWQASATYRGG
MSMEG_4550|M.smegmatis_MC2_155 LAER--VLWAVDLTTVYAALLLTVLADAGKTVRYLAGRAVWQASATYRGG
Mb3360|M.bovis_AF2122/97 EQFGLELIWGIEDCRNMSARLERDLLAAGQQVVRVPTKLMAQTRKSARS-
Rv0797|M.tuberculosis_H37Rv EQFGLELIWGIEDCRNMSARLERDLLAAGQQVVRVPTKLMAQTRKSARS-
MAV_1059|M.avium_104 ERFGAQVVWAIEDCRHLSARLERDLLTAGQQVVRVPPKLMAQARASART-
: * : :* : * .: : :. : : :: : *
TH_3017|M.thermoresistible__bu EGKTDAKDAAVIADQARMR-RDLQPLRPGDDITVELRILTSRRTDLVADR
MMAR_3782|M.marinum_M DGKTDAKNARIIADQARMR-TDLQPVRRADPIATDLRLLTSRRTDVVCDR
Mflv_4200|M.gilvum_PYR-GCK EAKTDAKDARVIADQARMRGQDLPVLHPDDDLISELRMLTGHRADLVADR
Mvan_0416|M.vanbaalenii_PYR-1 EAKTDAKDARVIADQARMRGQDLPVLHPDDDLISELRMLTGHRADLVADR
MSMEG_4550|M.smegmatis_MC2_155 EAKTDAKDARVIADQSRMRGQDLPVLHPNDDLISELRMLTGHRADLVADR
Mb3360|M.bovis_AF2122/97 RGKSDPIDALAVAR-AVLRETDLP-LATHDETSRELKLLTDRRDVLVAQR
Rv0797|M.tuberculosis_H37Rv RGKSDPIDALAVAR-AVMRETDLP-LATHDETSRELKLLTDRRDVLVAQR
MAV_1059|M.avium_104 RGKSDPIDALAVAR-GFLREPDLP-VASHDKVSRELKLLVDRREVLVAQR
.*:*. :* :* . :* ** : * :*::*..:* :*.:*
TH_3017|M.thermoresistible__bu TRTINRLRAQLLEYFPALERAFDYSTSKAALLLLTGYQTPDGLRRAGAAR
MMAR_3782|M.marinum_M VRAINRLRQTLLEYFPPLERAFDYSKSKAALTLLSRYQTPDSLRRIGPTR
Mflv_4200|M.gilvum_PYR-GCK TRTINRLRQQLVAVCPALERAAQPSQDRGWVILLARYQRPKAIRQSGVSR
Mvan_0416|M.vanbaalenii_PYR-1 TRTINRLRQQLVAVCPALERAAQPSQDRGWVILLARYQRPKAIRQSGVSR
MSMEG_4550|M.smegmatis_MC2_155 TRTINRLRQQLVAVCPALERAAQLSQDRGWVVLLARYQRPKAIRQSGVSR
Mb3360|M.bovis_AF2122/97 TSAINRLRWLVHELDPERAPAARSLD------------------------
Rv0797|M.tuberculosis_H37Rv TSAINRLRWLVHELDPERAPAARSLD------------------------
MAV_1059|M.avium_104 TAMINRLRWRVHELDPERAPGPASLD------------------------
. ***** : * .
TH_3017|M.thermoresistible__bu LAVWLGKRKARNADAVAAKALQAAHAQHTVIPGQQLAAAMVARLAKEVMA
MMAR_3782|M.marinum_M LATWLKARGCRNSATVAQTAVQAAQTQHTTLPTQTVGAQLVPRLAAEITT
Mflv_4200|M.gilvum_PYR-GCK LTKVLTDAGVRNAASIAAAAVAAVKTQTMRLPGEEVAAGLIADLAREVIA
Mvan_0416|M.vanbaalenii_PYR-1 LTKVLTDAGVRNAASIAAAAVAAVKTQTMRLPGEEVAAGLIADLAREVIA
MSMEG_4550|M.smegmatis_MC2_155 LTKVLTDAGVRNAASIAGAAVAAVKTQTVRLPGEEVAAGLVADLAREVIA
Mb3360|M.bovis_AF2122/97 ----------------AAKHQQALRTWLDTQPG--LVAELARAELTDIIR
Rv0797|M.tuberculosis_H37Rv ----------------AAKHQQALRTWLDTQPG--LVAELARAELTDIIR
MAV_1059|M.avium_104 ----------------RGKHRHLLGAWLATVPG--LVAELARDELADITR
: * : * : ::
TH_3017|M.thermoresistible__bu LDTEIGDTDAMIEERFHRHRHAEIIVSMSGFGVTLGAEFLAATGGDMSAF
MMAR_3782|M.marinum_M IDAELAHVDNEITARFADHDSAEILTSMPGFGPVLAATFLAQIGGNLDGF
Mflv_4200|M.gilvum_PYR-GCK LDDRIKTTDADIEGRFRRHPLAEVITSMPGIGFRLGAEFLAAVG-DPALI
Mvan_0416|M.vanbaalenii_PYR-1 LDDRIKTTDADIEGRFRRHPLAEVITSMPGIGFRLGAEFLAAVG-DPALI
MSMEG_4550|M.smegmatis_MC2_155 LDDRIKTTDADIEGRFRRHPLAEVITSMPGMGFRLGAELLAAVG-DPALI
Mb3360|M.bovis_AF2122/97 LTGEINTLAQRISARVH--QVAPALLEIPGCAELTAAKIVGEAA-GVTRF
Rv0797|M.tuberculosis_H37Rv LTGEINTLAQRISARVH--QVAPALLEIPGCAELTAAKIVGEAA-GVTRF
MAV_1059|M.avium_104 LTEAINALAKRIGSRVR--TVAPALLAMPGCAELTAAKLVGETA-GVTRF
: : * *. * : :.* . .* ::. . . :
TH_3017|M.thermoresistible__bu DSVDRLAGVAGLAPVPRDSGRISGNLQRPRRYNRRLLRVCYLSALSSIRS
MMAR_3782|M.marinum_M DTVDRLACVAGLAPVPRDSGRISGNLHRPRRFNRRLLRPCYLAALSSLKN
Mflv_4200|M.gilvum_PYR-GCK GSADQLAAWAGLAPVSRDSGKRTGRLHTPKRYSRRLRRVMYMSALTAIRC
Mvan_0416|M.vanbaalenii_PYR-1 GSADQLAAWAGLAPVSRDSGKRTGRLHTPKRYSRRLRRVMYMSALTAIRC
MSMEG_4550|M.smegmatis_MC2_155 GSADQLAAWAGLAPVSRDSRKRTGRLHTPKRYSRRLRRVMYMSALTAIRC
Mb3360|M.bovis_AF2122/97 KSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRM
Rv0797|M.tuberculosis_H37Rv KSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRM
MAV_1059|M.avium_104 KSEAAFARHAGVAPVPVWSGNTAGRVRMTRSGNRQLNAALHRIAITQIRL
: :* *.:**:. * . :*.:: .: .*:* : *:: ::
TH_3017|M.thermoresistible__bu DP-ASRTYYNRKRAEGKRHSQAVLALARRRLNVLWAMLRDHTTYQPTTPT
MMAR_3782|M.marinum_M SP-ASRTFYDRKRAEGKSHKQALIALARRRINVIWAMLRDHTHYHEPDLV
Mflv_4200|M.gilvum_PYR-GCK DP-DSKAYYQRKRDEGKRPIPATICLARRRTNVLYALIRDNRTWQPDSPP
Mvan_0416|M.vanbaalenii_PYR-1 DP-DSKAYYQRKRDEGKRPIPATICLARRRTNVLYALIRDNRTWQPDSPP
MSMEG_4550|M.smegmatis_MC2_155 DP-DSKAYYQRKRDEGKRPIPATICLARRRTNVLYALIRDNRTWQPESPP
Mb3360|M.bovis_AF2122/97 TDSRGQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQ
Rv0797|M.tuberculosis_H37Rv TDSRGQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQ
MAV_1059|M.avium_104 EG-LGQTYYRHRLAAGDSNPEALRCLKRRLARIIFGHLHTDHQHRTQPCQ
.:::* : *. * .* ** . :: ::
TH_3017|M.thermoresistible__bu AAAAA---------------------------------------------
MMAR_3782|M.marinum_M NTPLAA--------------------------------------------
Mflv_4200|M.gilvum_PYR-GCK VTAAA---------------------------------------------
Mvan_0416|M.vanbaalenii_PYR-1 VTAAA---------------------------------------------
MSMEG_4550|M.smegmatis_MC2_155 NIAAA---------------------------------------------
Mb3360|M.bovis_AF2122/97 PAAACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKR
Rv0797|M.tuberculosis_H37Rv PAAACHRSYCS-----RSCLSG----------------------------
MAV_1059|M.avium_104 TAAA----------------------------------------------
.
TH_3017|M.thermoresistible__bu --------------------------------------------------
MMAR_3782|M.marinum_M --------------------------------------------------
Mflv_4200|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0416|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_4550|M.smegmatis_MC2_155 --------------------------------------------------
Mb3360|M.bovis_AF2122/97 RFGEVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTAR
Rv0797|M.tuberculosis_H37Rv --------------------------------------------------
MAV_1059|M.avium_104 --------------------------------------------------
TH_3017|M.thermoresistible__bu --------------------------------------------------
MMAR_3782|M.marinum_M --------------------------------------------------
Mflv_4200|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0416|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_4550|M.smegmatis_MC2_155 --------------------------------------------------
Mb3360|M.bovis_AF2122/97 SIGCSWCVDFGAMLQRLDGLDVDRLTDIDNYATSSKFSDDERAAIAYAEA
Rv0797|M.tuberculosis_H37Rv --------------------------------------------------
MAV_1059|M.avium_104 --------------------------------------------------
TH_3017|M.thermoresistible__bu --------------------------------------------------
MMAR_3782|M.marinum_M --------------------------------------------------
Mflv_4200|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0416|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_4550|M.smegmatis_MC2_155 --------------------------------------------------
Mb3360|M.bovis_AF2122/97 MTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSALGITEQ
Rv0797|M.tuberculosis_H37Rv --------------------------------------------------
MAV_1059|M.avium_104 --------------------------------------------------
TH_3017|M.thermoresistible__bu -----------------------
MMAR_3782|M.marinum_M -----------------------
Mflv_4200|M.gilvum_PYR-GCK -----------------------
Mvan_0416|M.vanbaalenii_PYR-1 -----------------------
MSMEG_4550|M.smegmatis_MC2_155 -----------------------
Mb3360|M.bovis_AF2122/97 GFNSGDACRVPWAAPDVPSAESR
Rv0797|M.tuberculosis_H37Rv -----------------------
MAV_1059|M.avium_104 -----------------------