For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MIPTMTSAGWAPGVVQFREYQRRWLRGDVLAGLTVAAYLIPQAMAYATVAGLPPAAGLWASIAPLAIYAL LGSSRQLSIGPESATALMTAAVLAPMAAGDLRRYAVLAATLGLLVGLICLLAGTARLGFLASLLSRPVLV GYMAGIALVMISSQLGTITGTSVEGNEFFSEVHSFATSVTRVHWPTFVLAMSVLALLTMLTRWAPRAPGP IIAVLAATMLVAVMSLDAKGIAIVGRIPSGLPTPGVPPVSVEDLRALIIPAAGIAIVTFTDGVLTARAFA ARRGQEVNANAELRAVGACNIAAGLTHGFPVSSSSSRTALADVVGGRTQLYSLIALGLVVIVMVFASGLL AMFPIAALGALVVYAALRLIDLSEFRRLARFRRSELMLALATTAAVLGLGVFYGVLAAVALSILELLRRV AHPHDSVLGFVPGIAGMHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVVDQDPGQVEWFVLN AESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDKIGEDHIFMTLPTAVQAFRRR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1768c | - | - | 100% (560) | sulphate-transport transmembrane protein ABC transporter |
| M. bovis AF2122 / 97 | Mb1734 | - | 6e-24 | 25.19% (393) | transmembrane protein |
| M. bovis AF2122 / 97 | Mb3301 | - | 2e-23 | 22.60% (407) | transmembrane carbonic anhydrase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4975 | - | 0.0 | 60.66% (544) | sulfate transporter |
| M. tuberculosis H37Rv | Rv1739c | - | 0.0 | 99.82% (560) | sulphate-transport transmembrane protein ABC transporter |
| M. leprae Br4923 | MLBr_02279 | - | 2e-26 | 22.92% (397) | putative transmembrane transport protein |
| M. abscessus ATCC 19977 | MAB_4448 | - | 4e-50 | 28.68% (551) | putative sulfate transporter |
| M. marinum M | MMAR_4750 | - | 7e-37 | 27.84% (528) | integral membrane transporter |
| M. avium 104 | MAV_0121 | - | 5e-30 | 25.19% (401) | carbonate dehydratase |
| M. smegmatis MC2 155 | MSMEG_6453 | - | 6e-45 | 25.37% (544) | sulfate permease |
| M. thermoresistible (build 8) | TH_2104 | - | 2e-47 | 26.22% (553) | sulfate permease |
| M. ulcerans Agy99 | MUL_0321 | - | 2e-37 | 27.40% (551) | integral membrane transporter |
| M. vanbaalenii PYR-1 | Mvan_1430 | - | 0.0 | 60.58% (553) | sulfate transporter |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_6453|M.smegmatis_MC2_155 ----------MLANLARLLPHKNDYTDVPRTWRQDVLAGITVGVVALPLA
TH_2104|M.thermoresistible__bu ------VIATAKENLIRLLPSRRDYAELPRSWRRDILAGITVGVVALPLA
MMAR_4750|M.marinum_M ---------------------MLAALRSPTRLRTEVLAGLVVALALIPEA
MUL_0321|M.ulcerans_Agy99 MSSQQVSAVPTIRKAGDPSTAVLAALRSPTRLRTEVLAGLVVALALIPEA
MLBr_02279|M.leprae_Br4923 ---------------------------MRSAIRYDLPASLVVFLVALPLS
MAV_0121|M.avium_104 -------------------MSTSRSERLREVLRYDLPASLVVFLVALPLS
Mb1768c|M.bovis_AF2122/97 -------MIPTMTSAGWAPGVVQFREYQRRWLRGDVLAGLTVAAYLIPQA
Rv1739c|M.tuberculosis_H37Rv -------MIPTMTSAGWAPGVVQFREYQRRWLRGDVLAGLTVAAYLIPQA
Mflv_4975|M.gilvum_PYR-GCK ----------------MTSNFGELRSYRRSALRDDTQAGLSVAAYLVPQA
Mvan_1430|M.vanbaalenii_PYR-1 ------------MLTRWAPGLAGLREGRGAPLRVDLLAGLSVSAYLIPQA
MAB_4448|M.abscessus_ATCC_1997 ----------------MPSAPGLFESYDAIKARRDVIAGLTVAAISLPQA
* : *.: * :* :
MSMEG_6453|M.smegmatis_MC2_155 LAFGISSGVGAAAGLITAVVAGLVAAVFGGSHVQVSGPTGAMAVVLAPIV
TH_2104|M.thermoresistible__bu LAFGISSGVGAAAGLITAVVAGLVAAVFGGSHIQVSGPTGAMAVILAPIV
MMAR_4750|M.marinum_M ISFSIIAGVDPRVGLFASFTMAVTIAVVGGRPAMISAATGAIALVIAPLA
MUL_0321|M.ulcerans_Agy99 ISFSIIAGVDPRVGLFASFTMAVTIAVVGGRLAMISAATGAIALVIAPLA
MLBr_02279|M.leprae_Br4923 LGIAIASDTPVLAGLIAAIVGGIVAGALGGSPLQVSGPAAGLTVVIADLI
MAV_0121|M.avium_104 LGIAIASDAPVLAGLIAAIVGGIVGGWLGGSPLQVSGPAAGLTVVVADVV
Mb1768c|M.bovis_AF2122/97 MAYATVAGLPPAAGLWASIAPLAIYALLGSSRQLSIGPESATALMTAAVL
Rv1739c|M.tuberculosis_H37Rv MAYATVAGLPPAAGLWASIAPLAIYALLGSSRQLSIGPESATALMTAAVL
Mflv_4975|M.gilvum_PYR-GCK LAYATLAGLSPAAGLWAALPPLLVYAILGSSRQLSVGPESTTALMTAAVL
Mvan_1430|M.vanbaalenii_PYR-1 LAYAALAGLSPIVGLWAALPPLLIYAILGSSRQLSVGPESTTSLMTAAVL
MAB_4448|M.abscessus_ATCC_1997 MAYALIAGVDPKYGVYSAIVVTAIASIFGSSSHLINGPTSAISLLVFSSL
:. . :. *: ::. . .*. .. . :::
MSMEG_6453|M.smegmatis_MC2_155 AEHGLG--------SIALVTVLAGLLVLAAGITGLGRAVTFIPWPVIEGF
TH_2104|M.thermoresistible__bu AQHGLT--------SIALVTVLAGLIVLAAGITGLGRAVTFIPWPVIEGF
MMAR_4750|M.marinum_M REHGAD--------YFIAAVILAGLVQITLSLLGVARLMRFIPRSVMVGF
MUL_0321|M.ulcerans_Agy99 REQGAD--------YFIAAVILAGLVQITLSLLGVARLMRFIPRSVMVGF
MLBr_02279|M.leprae_Br4923 SDFGWG--------VTCFITVAAGVLQVLLGLSRVARAALAISPVVVHAM
MAV_0121|M.avium_104 AEFGWG--------VTCFITVVAGVLQVLLGFSRIARAALAISPVVVHAM
Mb1768c|M.bovis_AF2122/97 APMAAG-DLRRYAVLAATLGLLVGLICLLAGTARLGFLASLLSRPVLVGY
Rv1739c|M.tuberculosis_H37Rv APMAAG-DLRRYAVLAATLGLLVGLICLLAGTARLGFLASLRSRPVLVGY
Mflv_4975|M.gilvum_PYR-GCK APVVGGDDPVRYAASAAVLAILVGLVCLGAGMLRLGYLANMLSKPVLVGY
Mvan_1430|M.vanbaalenii_PYR-1 VPLVGGNDPVRYATYAAILAILVGVLCLAAGIIGLGYLANLLSKPVLVGY
MAB_4448|M.abscessus_ATCC_1997 AFLDPE-NRTGLFEALFLLGVLVGTIQILIAVFKLGDLTRYISESVVIGF
: .* : : . :. . *: .
MSMEG_6453|M.smegmatis_MC2_155 TLGIAAIIFLQQVPAALAQQAPSGE-RTLLAAFTVVRNADWGEAAKTLAV
TH_2104|M.thermoresistible__bu TLGIAAIIFLQQVPAAFATEAPAGQ-RTLVAAWHVVTHADWTAAVKTLSV
MMAR_4750|M.marinum_M VNALAILIFLSQLPHLLGVPP------------------------VVYPF
MUL_0321|M.ulcerans_Agy99 VNALAILIFLSQVPHLLGVPA------------------------VVYPF
MLBr_02279|M.leprae_Br4923 LAGVGITIALQQAHVLLGGKSKSTA-WHNAIGLPSQILGAHRPGVILGVL
MAV_0121|M.avium_104 LAGIGITIALQQVHVLLGGSSKSSA-WSNVTGLPAQILGAHRPGLVLGLL
Mb1768c|M.bovis_AF2122/97 MAGIALVMISSQLGTITGTSVEGN---EFFSEVHSFATSVTRVHWPTFVL
Rv1739c|M.tuberculosis_H37Rv MAGIALVMISSQLGTITGTSVEGN---EFFSEVHSFATSVTRVHWPTFVL
Mflv_4975|M.gilvum_PYR-GCK MLGVALAMVAGQLGRIAGVEVTGD---TVPAQLAAFAAAVDGVHWPTAGL
Mvan_1430|M.vanbaalenii_PYR-1 LFGIAIAMVTGQLERISGVPVSGE---SVVEQVRAFASGIGQVHWPTLMM
MAB_4448|M.abscessus_ATCC_1997 MASAALLLAIGQLANAIGVRDKGDGHMQVLQRAWLTLFHGDAVNYRALFL
. . : * . .
MSMEG_6453|M.smegmatis_MC2_155 VGVVAVLMIVLPRVHSGIPASLTAVIVATVLIVALDIPV----------A
TH_2104|M.thermoresistible__bu VSLVALLMVVLPRLHRSIPESLTAVVAATVIVTVFGISV----------A
MMAR_4750|M.marinum_M VIVGLLLMVFLPKLTTVVPAPLVAIVVLTAAAVAFSVEI----------P
MUL_0321|M.ulcerans_Agy99 VIVGLLLMVFLPKLTTVVPAPLVAIVVLTAAAVAFSVEI----------L
MLBr_02279|M.leprae_Br4923 VITILIAWRWVPARVARIPGPLVAIVVTTLVSVVFPFHV----------S
MAV_0121|M.avium_104 VIAILVAWRWVPARLAIVPGPLVAIVVVTIISMVLPFKV----------S
Mb1768c|M.bovis_AF2122/97 AMSVLALLTMLTRWAPRAPGPIIAVLAATMLVAVMSLDA----------K
Rv1739c|M.tuberculosis_H37Rv AMSVLALLTMLTRWAPRAPGPIIAVLAATMLVAVMSLDA----------K
Mflv_4975|M.gilvum_PYR-GCK ALGVLVLVLTMERVAPTLPAPLIGVVVATVVTWAGELTR----------F
Mvan_1430|M.vanbaalenii_PYR-1 AAAVLLCVVAVERAAPRLPGPLIAVLGAAAVVAVWSLTR----------Y
MAB_4448|M.abscessus_ATCC_1997 SVTAVALAVLLRRLVQRYELPQIDMLLVLIVTAVIAYAYGWTVPDGTGHT
: . :: .
MSMEG_6453|M.smegmatis_MC2_155 TIG---ELPSHLPAPVLPHV--DVNTLRTMFSAALAIAALAAIESLLSAR
TH_2104|M.thermoresistible__bu TIG---ELPSQLPTPVLPQA--DMGAMQTLLGAALAIAALAAIESLLSAR
MMAR_4750|M.marinum_M NVGDEGQLPSSLPTLLVPHVPFALETLSIIGPYALAMALVGLLESLLTAK
MUL_0321|M.ulcerans_Agy99 NVGDEGQLPSSLPTLLVPHVPFALETLSIIGPYALAMALVGLLESLLTAK
MLBr_02279|M.leprae_Br4923 RIQ--VDNRSSLDVLQLPKLP--DGHWGAVVLGVITVALIASVESLLSAV
MAV_0121|M.avium_104 RIE--LDG-SVLDAVRLPSLP--HGNWGAVAIAVITVTLITSVQSLLTAV
Mb1768c|M.bovis_AF2122/97 GIAIVGRIPSGLPTPGVPPVS--VEDLRALIIPAAGIAIVTFTDGVLTAR
Rv1739c|M.tuberculosis_H37Rv GIAIVGRIPSGLPTPGVPPVS--VEDLRALIIPAAGIAIVTFTDGVLTAR
Mflv_4975|M.gilvum_PYR-GCK GVAVVGDVPVGLPAPALPWLT--VDQIQALIVPAIGISVVAFSDNILTAR
Mvan_1430|M.vanbaalenii_PYR-1 GIDVVGAIPAGAPSPAVPVLA--DVPVRELLMAAVGIAVVAFSDNILTAR
MAB_4448|M.abscessus_ATCC_1997 DVKISGKIPASLPEFHIPEVQ--VSTLGELSHGALAIAFIGLIEALSIAK
: :* : . :: : : : *
MSMEG_6453|M.smegmatis_MC2_155 VAATMSPTGPYDPNRELVGQGLASVASGAFGGMPATGAIARTAVNVRS-G
TH_2104|M.thermoresistible__bu VAATMSATGPYHPDRELVGQGMASVASGLFGGMPATGAIARTAVNVRS-G
MMAR_4750|M.marinum_M LVDDITDTHSN-KTREAWGQGVANVVTGFFGGMGGCAMIGQTMINVKVSG
MUL_0321|M.ulcerans_Agy99 LVDDITDTHSN-KTREAWGQGVANVVTGFFGGMGGCAMIGQTMINVKVPG
MLBr_02279|M.leprae_Br4923 SLDKMHNGPRTDLNRELIGQGAANIVSGAIGGLPITGVIVRSSTNVIA-G
MAV_0121|M.avium_104 SIDRMHTGPRTDFNRELIGQGAANIASGALGGLPIAGVIVRSSANVNA-G
Mb1768c|M.bovis_AF2122/97 AFAARR-GQEVNANAELRAVGACNIAAGLTHGFPVSSSSSRTALADVV-G
Rv1739c|M.tuberculosis_H37Rv AFAARR-GQEVNANAELRAVGACNIAAGLTHGFPVSSSSSRTALADVV-G
Mflv_4975|M.gilvum_PYR-GCK AFASRA-GQNIDPNTELRALGVSNLAVGFLRGFPVSSSASRTALAAAA-G
Mvan_1430|M.vanbaalenii_PYR-1 AFAARV-GETVDANAELRALGVSNIAVGFLRGFPVSSSGSRTALAAAA-G
MAB_4448|M.abscessus_ATCC_1997 AIAHHT-GQQIDYNRQILAEGLANLAGGFFQSLPGSGSLSRSAINYQS-G
: . * ..:. * .: . :: *
MSMEG_6453|M.smegmatis_MC2_155 AATRLSAIVHSLVLLAVVYLATGPVSAIPLSALAGVLMVTSFRMISATTI
TH_2104|M.thermoresistible__bu ARTRLAAIVHSLVLLAVVYLATGPVSAIPLSALAGVLMVTSFRMVSLHTA
MMAR_4750|M.marinum_M ARTRISTFLAGLFLLGLVVGLGDVVALIPMAALVAVMIMVSVGTMDWHSI
MUL_0321|M.ulcerans_Agy99 ARTRISTFLAGLFLLGLVVGLGDVVALIPMAALVAVMIMVSVGTMDWHSI
MLBr_02279|M.leprae_Br4923 AKSRASSIMHGIWILLFTIPFAGLVDQIPSAALAGLLIVVGVQLLKPAHI
MAV_0121|M.avium_104 AKTRASTIMHGFWVLVFAVPFAGLVEKIPTAALAGLLIVIGIELLKPAHI
Mb1768c|M.bovis_AF2122/97 GRTQLYSLIALGLVVIVMVFASGLLAMFPIAALGALVVYAALRLIDLSEF
Rv1739c|M.tuberculosis_H37Rv GRTQLYSLIALGLVVIVMVFASGLLAMFPIAALGALVVYAALRLIDLSEF
Mflv_4975|M.gilvum_PYR-GCK ARTQMYSLVVLAVVAVVVVFGGGLVSHVPAAALGGLIVYAALKLVDVRSF
Mvan_1430|M.vanbaalenii_PYR-1 ARTQRYSLVVLVVVSVVVLFGGSVVSTIPAAALGGLIVYAAAKLVDVAGF
MAB_4448|M.abscessus_ATCC_1997 AATRFSGIVSAATVTIALLLFAPLLRYIPQAALAGLLLVTAVRLVDFHRL
. :: :: : : .* :** .::: . :.
MSMEG_6453|M.smegmatis_MC2_155 R--KIVRSTRSDALIFVLTAVITVCFD-LIEAVEIGILVAAFFALRSVAR
TH_2104|M.thermoresistible__bu R--RILRSTRSDALTFVLTALVTITFD-LIEAVQIGVLVAAFFALRNVAR
MMAR_4750|M.marinum_M APATLRRMPRSETLVMLATVVVTVATHNLAYGVVAGVLTAMVLFARRVAH
MUL_0321|M.ulcerans_Agy99 APATLRRMPRSETLVMLATVVVTVATHNLAYGVVAGVLTAMVLFARRVAH
MLBr_02279|M.leprae_Br4923 ET-----ALRNGDLAVYLVTAVCVVFLNLLHGVMIGLAVAIALTGWRVIR
MAV_0121|M.avium_104 ET-----ALRNGDLAIYLVTVTSVIFLNLLHGVLIGLLLAVVVTGWRVVR
Mb1768c|M.bovis_AF2122/97 RR---LARFRRSELMLALATTAAVLGLGVFYGVLAAVALSILELLRRVAH
Rv1739c|M.tuberculosis_H37Rv RR---LARFRRSELMLALATTAAVLGLGVFYGVLAAVALSILELLRRVAH
Mflv_4975|M.gilvum_PYR-GCK RA---LARFRRSEVVLAALTAIAVTVFGLLYGVVIAVALSVLDLLRRLSH
Mvan_1430|M.vanbaalenii_PYR-1 KA---LARFRRSELVLALLTTFAVAVFGVLYGVLVAIGLTVLDLLRRLSH
MAB_4448|M.abscessus_ATCC_1997 VY---AIKASRYDAGLVIITALVGVAVNLDTAVLVGVVLSILLFVPRAAK
. . : .* .: : :
MSMEG_6453|M.smegmatis_MC2_155 RSSVVREELPGPRRP----------GDDQIALLRLDGAMFFGAAERISNA
TH_2104|M.thermoresistible__bu RSGVTREELPGEPQP----------GDERIALLRLEGSMFFGVAERMSST
MMAR_4750|M.marinum_M FMTVERIVESDTG------------SAAETVVYRVSGELFFASSNDLVYQ
MUL_0321|M.ulcerans_Agy99 FMTVERIVESDTG------------SAAETVVYRVSCELFFASSNDLVYQ
MLBr_02279|M.leprae_Br4923 ----ARVEAQPVG---------------DEWHVLVAGACTFLALPRLTRV
MAV_0121|M.avium_104 ----ARIEAEPVG---------------DGWHVVIEGACTFLALPRLTGV
Mb1768c|M.bovis_AF2122/97 PHDSVLGFVPGIAGMHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRR
Rv1739c|M.tuberculosis_H37Rv PHDSVLGFVPGIAGMHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRR
Mflv_4975|M.gilvum_PYR-GCK AHDSVQGLVPGLAGMHDVDDYPDARIVPGLVVYRYDAPLCFANAEDFRRR
Mvan_1430|M.vanbaalenii_PYR-1 AHDSVLGLVPGVAGMHDVDDYPDAALIPGLLVYRYDAPLCFANAEDFRRR
MAB_4448|M.abscessus_ATCC_1997 LKAAELVVTDEGVIRERTPQ-DRPTGAGAPVIYDLEGELFFGAAPELDRY
* :
MSMEG_6453|M.smegmatis_MC2_155 ITDAEH------PHVSVVIIRMSQLGMLDATGAHTLAEITTELESRGITV
TH_2104|M.thermoresistible__bu ISEIEA------DDISVVIIRLSQLGTLDATGANSLAQIATELERRGITV
MMAR_4750|M.marinum_M FNYVDD------PDN--VVIDMSQSHIWDASTVAALDAIITKYHAKGRCV
MUL_0321|M.ulcerans_Agy99 FNYVDD------PDN--VVIDMSQSHIWDASTVAALDAIITKYHAKGRCV
MLBr_02279|M.leprae_Br4923 LASVPP------CTR---VTVNISVNYLDHAAHQAIHDWQRQHHATGGTV
MAV_0121|M.avium_104 LASIPE------RTS---VTVHLLTNYLDHAAHQAIGDWQRRHCATGGTV
Mb1768c|M.bovis_AF2122/97 ALTVVD---QDPGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVF
Rv1739c|M.tuberculosis_H37Rv ALTVVD---QDPGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVF
Mflv_4975|M.gilvum_PYR-GCK ALEAIDQMDQPT---RWFVLNAEANVEVDMTAIEALDQVRQDCLRRGIVF
Mvan_1430|M.vanbaalenii_PYR-1 ALEAVDHMDQASPPVRWFLLNAEANVEVDMTAIEALDQLREECGRRGIVF
MAB_4448|M.abscessus_ATCC_1997 LESLHTR--IRDEHLKVVILRLKRVRHPDVVCIERLEHFIREQQQLGVTV
: * : * .
MSMEG_6453|M.smegmatis_MC2_155 IIKGVRPEHMDLLANVGVFESLRHENHLLDSLDDAVAHARTHVARQPH--
TH_2104|M.thermoresistible__bu IIKGVQPEHSKLLSNVGVFESLRHEKHLIDSLEDAIEHARSHVARQQTAR
MMAR_4750|M.marinum_M EIIGLNQDSAERHGRLSGQFGAEH--------------------------
MUL_0321|M.ulcerans_Agy99 EIIGLNQDSAERHGRLSGQFGAEH--------------------------
MLBr_02279|M.leprae_Br4923 HINGVVETGHFSRCAMGDLIGPEQQPEAAA--------------------
MAV_0121|M.avium_104 EVRDTTEPAARRRNSHLSLVEQVSSPGGA---------------------
Mb1768c|M.bovis_AF2122/97 AMARVKQDLRESLRAASLLDKIGEDHIFMTLPTAVQAFRRR---------
Rv1739c|M.tuberculosis_H37Rv AMARVKQDLRESLRAASLLDKIGEDHIFMTLPTAVQAFRRR---------
Mflv_4975|M.gilvum_PYR-GCK AMARVKQDLREALAAGGVLDEIGQDRLYMTLPTAVAAYQAWVASGNKG--
Mvan_1430|M.vanbaalenii_PYR-1 AMARVKQDLRDALTAAGVIDKIGEDRLYMTLPTAVEAYRAWAASRGTD--
MAB_4448|M.abscessus_ATCC_1997 LLAGVRPDSLALLENVGFTHWLPPEQVFPEEEKEFSATLRAVRYAQSRLE
:
MSMEG_6453|M.smegmatis_MC2_155 -----------------
TH_2104|M.thermoresistible__bu TTS--------------
MMAR_4750|M.marinum_M -----------------
MUL_0321|M.ulcerans_Agy99 -----------------
MLBr_02279|M.leprae_Br4923 -----------------
MAV_0121|M.avium_104 -----------------
Mb1768c|M.bovis_AF2122/97 -----------------
Rv1739c|M.tuberculosis_H37Rv -----------------
Mflv_4975|M.gilvum_PYR-GCK -----------------
Mvan_1430|M.vanbaalenii_PYR-1 -----------------
MAB_4448|M.abscessus_ATCC_1997 EEPPNPAANPEKLYYLV