For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VMLLTLTGCGSTHQALGPPSGLPDASPNERSAIQIPAGRIDDAVAKVDGLVGELMQNTGIPGMAVAIVHG GKTLYAKGFGVRDVGKGGGPDNKVDADTVFQLASVSKSVGATVVAHAVTDNVVTWDTPVVSKLPWFALRD PYVTGQVTIADLYSHRSGLPDHAGDLLEDLGYDRRQVLQRLKYLPLAPFRISYAYTNFGVTAAAEAVAAA AGQSWEDLSDEVLYRPLGMGSTSSRFTDFLARPNHAVNHVKVADRWEARYQRDPDAQSPAGGVSSSLNDM THWLAMVLADGVYNGRRITSPEALLLVYTPQVISRHPVSPRARASFYGYGFNVGVTSSGRTEYSHSGAFG LGAAANFVVLPSEDLAIIALTNAGPIGVPETLTAEFMDLVQYGQVREDWAALYKKAFAPLNELAGSLVGK QSPANPAPSRPLNDYVGVYANDYWGPATVTYHDGQLRLSLGPKNQTFDLTHWDGDTFTFTLSTENALPGS ISKATFAGDTLNLEYYDADKLGTFTR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0931 | - | - | 100% (516) | hypothetical protein Mb0931 |
M. bovis AF2122 / 97 | Mb1759c | - | 8e-25 | 28.08% (349) | penicillin-binding protein |
M. bovis AF2122 / 97 | Mb1957 | - | 1e-13 | 27.62% (239) | lipoprotein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1757 | - | 1e-176 | 59.50% (516) | beta-lactamase |
M. tuberculosis H37Rv | Rv0907 | - | 0.0 | 99.41% (511) | hypothetical protein Rv0907 |
M. leprae Br4923 | MLBr_01782 | - | 1e-05 | 24.00% (300) | hypothetical protein MLBr_01782 |
M. abscessus ATCC 19977 | MAB_0330 | - | 1e-12 | 26.02% (342) | Beta-lactamase |
M. marinum M | MMAR_4623 | - | 0.0 | 77.71% (516) | penicillin binding protein |
M. avium 104 | MAV_1030 | - | 0.0 | 72.97% (518) | penicillin-binding protein 4 |
M. smegmatis MC2 155 | MSMEG_5637 | - | 0.0 | 62.07% (522) | penicillin-binding protein 4 |
M. thermoresistible (build 8) | TH_0096 | - | 0.0 | 61.07% (524) | penicillin-binding protein 4 |
M. ulcerans Agy99 | MUL_1772 | - | 2e-11 | 22.35% (358) | beta-lactamase |
M. vanbaalenii PYR-1 | Mvan_4990 | - | 1e-175 | 59.11% (516) | beta-lactamase |
CLUSTAL 2.0.9 multiple sequence alignment Mb0931|M.bovis_AF2122/97 ---------MMLLT----------------LTGCGSTHQALGPPSGL--- Rv0907|M.tuberculosis_H37Rv ---------MATICGHDQTSGNGRHGDVADVNGCGSTHQALGPPSGL--- MMAR_4623|M.marinum_M ---------MTKRAAT-----TAVVMMFLALVGCAPKQSISNPPSTP--- MAV_1030|M.avium_104 ---------MSKRAAV-------LTAVLLGLTGCGSAQQPAGAPPRP--- Mflv_1757|M.gilvum_PYR-GCK ---MK----SRVGAVA-------LVMAVALLAGCAAESTEPAASSTPAPG Mvan_4990|M.vanbaalenii_PYR-1 ---MK----PRARVAA-------LALTAALLAGCGTEGAEPAASSTPAPS MSMEG_5637|M.smegmatis_MC2_155 MYSMRRSVFARAVGSA-------LVVGLAVSGCAGGDDTADAQRSAQPSQ TH_0096|M.thermoresistible__bu ---------VLKRFAA-------VLTALVLLAGCRSGDDASTAHPS---- MLBr_01782|M.leprae_Br4923 -------------------------------------------------- MAB_0330|M.abscessus_ATCC_1997 --------------------------MPELSTRCFDESSLMRRILAVVLT MUL_1772|M.ulcerans_Agy99 -------------------------MGVARPRWRGPRAAWFAGARKP--- Mb0931|M.bovis_AF2122/97 --PDASPNERSAIQIPAGRIDDAVAKVDGLVGELMQNTGIPGMAVAIVHG Rv0907|M.tuberculosis_H37Rv --PDASPNERSAIQIPAGRIDDAVAKVDGLVGELMQNTGIPGMAVAIVHG MMAR_4623|M.marinum_M --SQLPPNEVSGIDIPPGRIDEAVAKVDGLVAELMKSTGIPGMAVAIVHG MAV_1030|M.avium_104 --SDVSPNQVSALAIPAGRIDEAVAKVDGLVADLMRSSGIPGMAVAIVHG Mflv_1757|M.gilvum_PYR-GCK PLSDVPPPLVPAMPLPENAVANAVAKLDGLAEDLMSTSGVPGMAVAVVHQ Mvan_4990|M.vanbaalenii_PYR-1 PASDVPPPLVPAMPLPENAVADAVAKLDGLAEDLMSKSGIPGMAVAVVHG MSMEG_5637|M.smegmatis_MC2_155 TFADEPPPLVPAMALPENAVENAVAKLDGIAEDLMRSSGIPGMAVAVVHG TH_0096|M.thermoresistible__bu --SDLPPPLVAAVDLPADAVANAVARLDGLAADLLEQSGIPGLAVAVVHG MLBr_01782|M.leprae_Br4923 ----------------------------MVALDALDDWPVPTTAAAVVGP MAB_0330|M.abscessus_ATCC_1997 IALLVSACGKHSAIVVAELDPQTTAKLDSAINEILTSAAVPGAIVGVWGP MUL_1772|M.ulcerans_Agy99 ----SDGRRLTRRPPAANLNPVNLDANQADIREVCDAGLLSGAVTVVWQH : :. . : Mb0931|M.bovis_AF2122/97 GKTLYAKGFGVRDVGKGGGPDNKVDADTVFQLASVSKSVGATVVAHAVTD Rv0907|M.tuberculosis_H37Rv GKTLYAKGFGVRDVGKGGGPDNKVDADTVFQLASVSKSVGATVVAHAVTD MMAR_4623|M.marinum_M GKTLYAKGFGVRDVSKGDGQDNKVDTDTVFQLASMSKPIGATVVAHEVST MAV_1030|M.avium_104 GKVLYAKGFGVKDVTSGQGRDNAVDTDTVFQLASVSKSVGATVVAHEVSD Mflv_1757|M.gilvum_PYR-GCK GKTVYAKGFGVKNNTQSDSPENRVDADTVFQLASLSKPLSATVVAALVGQ Mvan_4990|M.vanbaalenii_PYR-1 GKAVYAKGFGVRNNTMSDEPHNEVDADTVFQLASLSKPLSATAVAALVGQ MSMEG_5637|M.smegmatis_MC2_155 GKTVYAKGFGVRDVRNGDVESNRVDPDTVFQLASLSKPIAATVVAHQVGT TH_0096|M.thermoresistible__bu GKTVYAKGFGVKDIRTGDP----VGADTVFQLASLSKPIGATVVAHQVGT MLBr_01782|M.leprae_Br4923 TGVLAARG----------------DTEQVFPLASVTKPLVARAVQIAIEE MAB_0330|M.abscessus_ATCC_1997 -KGQYVRTFGVANTATRAP----LRPDFYHRIGSVTKTFTVTAVLQLVDE MUL_1772|M.ulcerans_Agy99 GEVLQVNEIGYRDVEAGLP----MQRDTLFRIASMTKPVTVAAAMSMVDE .. : . :.*::*.. . .. : Mb0931|M.bovis_AF2122/97 NVVTWDTPVVSKLPWF------------ALRDPYVTGQVTIADLYSHRSG Rv0907|M.tuberculosis_H37Rv NVVTWDTPVVSKLPWF------------ALRDPYVTGQVTIADLYSHRSG MMAR_4623|M.marinum_M NVVSWDTPVVSKLPEF------------ALSDPYVTDHATIADLYSHRSG MAV_1030|M.avium_104 HVVGWDTPVVSTLPWF------------ALGDPYVTGHVTVGDLYSHRSG Mflv_1757|M.gilvum_PYR-GCK DQVGWDTPVVSRLPWF------------ALSDPTTTQMVTVGDMFSHRSG Mvan_4990|M.vanbaalenii_PYR-1 NQVSWDTPIVSRLPWF------------ALSDPAVTQMVTVGDMFSHRSG MSMEG_5637|M.smegmatis_MC2_155 GAIGWDTPVVEHLPWF------------ALSDPVTTRMVTVGDLFAHRSG TH_0096|M.thermoresistible__bu GAISWDTPVISRLPWF------------RLSDPVVTERVTIGDMYAHRSG MLBr_01782|M.leprae_Br4923 GVVDLDT----------------------VAGPPGS---TIRHLLAHASG MAB_0330|M.abscessus_ATCC_1997 GKVELDDPIAKYVDKV------------PNGNKITLRELARMQSGLFNYS MUL_1772|M.ulcerans_Agy99 GKIALRDPITRWAPELRDIRVLDDPHGPLDRTHPTRRPILIEDLLTHTSG : . . . Mb0931|M.bovis_AF2122/97 LPDHAGDLLEDL--------GYDRRQVLQRLKYLPLAPF----RISYAYT Rv0907|M.tuberculosis_H37Rv LPDHAGDLLEDL--------GYDRRQVLQRLKYLPLAPF----RISYAYT MMAR_4623|M.marinum_M LPDHAGDALEDL--------GYDTTQVLERLKYLPLDPF----RISYAYT MAV_1030|M.avium_104 LPDHAGDKLEDL--------GYGRRQICERLRLLPLRPF----RNSYAYT Mflv_1757|M.gilvum_PYR-GCK LPDHAGDQLEDL--------GYDRRQVLDRLRQLPLAQF----RTSYAYT Mvan_4990|M.vanbaalenii_PYR-1 LPDHAGDQLEDL--------GYDRRQVLERLRQLPLDQF----RTSYAYT MSMEG_5637|M.smegmatis_MC2_155 LPDHAGDQLEDL--------GYDRRYILEHLRALPLDPF----RNSYAYT TH_0096|M.thermoresistible__bu LPDHAGDLLEDL--------GYDRRQVLEKLAQLPLAPF----RISYAYT MLBr_01782|M.leprae_Br4923 LAMHSKYVMAPP--------GTRR-----------------------IYS MAB_0330|M.abscessus_ATCC_1997 MSLAFSRDLEAD--------PRRQYSTHELLDYAFAQPSNFVPGQGYEYS MUL_1772|M.ulcerans_Agy99 LAYSFSVSGDISRAYMRLPFGHGSDAWLAELAALPLVHQ----PGERVTY :. Mb0931|M.bovis_AF2122/97 NFGVTAAAEAVAAAAGQSWEDLSDEVLYRPLGMGSTSS-RFTDFLARPNH Rv0907|M.tuberculosis_H37Rv NFGVTAAAEAVAAAAGQSWEDLSDEVLYRPLGMGSTSS-RFTDFLARPNH MMAR_4623|M.marinum_M NFGVTAAADAVAAAAGKAWPDLSEEVLYRPLGMTSTSS-RFADFLARPNH MAV_1030|M.avium_104 NYGITAAAEAVAAAAGKTWEELSDEVLYRPLGMTSTSS-RFADFLARPNR Mflv_1757|M.gilvum_PYR-GCK NFGLTAGAEAVATGAGKSWEDLAADTLLRPLGMGVTSY-RFEDYASRRDR Mvan_4990|M.vanbaalenii_PYR-1 NFGLTAGAEAVATGAGKSWEDLAADTLLRPLGMGATSY-RFSDYESRRDR MSMEG_5637|M.smegmatis_MC2_155 NFGLTAAAEAVAAAAGRSWEDLARDVLYRPLGMDSTSS-RFADYEATQNR TH_0096|M.thermoresistible__bu NFGXTAAAEAVAADAGMPWEELSGRVLYEPLGMASTSS-RFADYQARADR MLBr_01782|M.leprae_Br4923 NYGFRVLAETVQREAGIGFSRYLTEAVLEPLAMTATKL-EDGTWAAG--- MAB_0330|M.abscessus_ATCC_1997 NTNAVLLGQVVEKVSGQTLPAFVQEHITGPLGMRRTSFPETSAIADPHAR MUL_1772|M.ulcerans_Agy99 SHAIDLLGVIMSRIDDKPFYQVLDERILGPAGMTDTGFFVSTQAQRRAAT . . : . : * .* * Mb0931|M.bovis_AF2122/97 AVNHVKVADR----WEARYQRDPDAQSPAGGVSSSLNDMTHWLAMVLADG Rv0907|M.tuberculosis_H37Rv AVNHVKVADR----WEARYQRDPDAQSPAGGVSSSLNDMTHWLAMVLADG MMAR_4623|M.marinum_M AVNHIKVGDR----WEARFQRDPDAQTPAGGVSSSLNDMAHWLTMVLANG MAV_1030|M.avium_104 AVNHIKIGDS----WQARFQRNPDAQSPAGGVSSSVRDMARWLMMLLDNG Mflv_1757|M.gilvum_PYR-GCK AVGHIRIDDG----YQPRYVRDAQAQSPAGGASSSVNDMTRWMAMVLAEG Mvan_4990|M.vanbaalenii_PYR-1 AVGHIRIDGG----YQPRFVRDAQAQSPAGGASSSVNDMTRWMAMVLADG MSMEG_5637|M.smegmatis_MC2_155 AVGHIRVDGR----YEPQYVRNADAQTPAGGVSASVDDMTRWLAMVLGDG TH_0096|M.thermoresistible__bu AVGHIHVDGG----YQPFYLRDPDAESPAGGVSSSVNDVARWLAMVLGDG MLBr_01782|M.leprae_Br4923 -----------------------------FGATSTVADLAAFANDLLRPA MAB_0330|M.abscessus_ATCC_1997 GYTQLTPTGS----LVDSTDWNPSWASWAGAMISTLDDLRIWVPALATG- MUL_1772|M.ulcerans_Agy99 MYRLDELDQLRHDVMGPPHVRPPSFCNAGGGLWSTADDYLRFVRLLLGDG . :: * : : Mb0931|M.bovis_AF2122/97 VYNGRRITSPEALLLVYTPQVISRHPVSPRARASFYG---YGFNVGVTSS Rv0907|M.tuberculosis_H37Rv VYNGRRITSPEALLPVYTPQVISRHPVSPRARASFYG---YGFNVGVTSS MMAR_4623|M.marinum_M EYNGQQIVSPEALLPAITPQVISSAARSPKARAGFYG---HGFTVSVSSA MAV_1030|M.avium_104 THDGQHIASPEALLPALSPQVVSAPATTPKARTGFYG---YGFNTSVDAS Mflv_1757|M.gilvum_PYR-GCK RHDGNALIDPQALLPAISPQVTSAPPTEPAMRPGFYG---YGFNVGTTSA Mvan_4990|M.vanbaalenii_PYR-1 RHDGNQLIDPTALLPAITPQVTSSRGSEPAMRSGFYG---YGFNVGTTSA MSMEG_5637|M.smegmatis_MC2_155 VFEGERIVEESTLLPAITPQVVSDRASQPAMRSGFYG---YGFNVGTTSA TH_0096|M.thermoresistible__bu SFEGRRIVDPDALLPALTPQIVSSPATEPAMRSGFYG---YGFNVGITSA MLBr_01782|M.leprae_Br4923 TVSAQIHAEATSVQFPDLDGVLPGHGVQ---RPNDWG---LGYEIKNSK- MAB_0330|M.abscessus_ATCC_1997 -----VLLKPDSQQQRLQTVAMPPVPDDIRYGLGIFD---ARGWIGHSGS MUL_1772|M.ulcerans_Agy99 TIDGVRVLSPESVRLMRTDRLSDEHKRHNFLGAPFWVGRGFGLNLSVVTD . : : Mb0931|M.bovis_AF2122/97 GRTEYSHSGAFGLGAAANFVVLPSEDLAIIALTNAGPIGVPETLTAEFMD Rv0907|M.tuberculosis_H37Rv GRTEYSHSGAFGLGAAANFVVLPSEDLAIIALTNAGPIGVPETLTAEFMD MMAR_4623|M.marinum_M GRTQYGHSGAFGLGAATNFVVLPSEDIAIVALTNAAPYGIPEALTAQFMD MAV_1030|M.avium_104 GRTEYSHSGAFDLGAATNFVVLPSEDLAIIALTNAAPYGIPETLTAEFMD Mflv_1757|M.gilvum_PYR-GCK ARTQLSHSGAFELGAATNVLFLPSADVAIIALTNATPTGVPETLTAQFAD Mvan_4990|M.vanbaalenii_PYR-1 ARTQLSHSGAFELGAATNVLFLPSADVAIVALTNATPTGIPETLTAQFAD MSMEG_5637|M.smegmatis_MC2_155 ARTQLSHSGAFELGAATNFVILPSADVGIVALTNGTPAGIPETLTAEFAD TH_0096|M.thermoresistible__bu ARTELSHSGAFELGTGTNFVILPSADAGIVALTNATPSGVAEALTAQFAD MLBr_01782|M.leprae_Br4923 ---------------------LP-------------------HWTGTLNS MAB_0330|M.abscessus_ATCC_1997 --------------------------------------------IPGYQT MUL_1772|M.ulcerans_Agy99 PVQSTPLFGP--------------------------------GGLGTFSW Mb0931|M.bovis_AF2122/97 LVQYGQVREDWAALYKKAFAPLNELAGSLVGKQSPANPAPSRPLNDYVGV Rv0907|M.tuberculosis_H37Rv LVQYGQVREDWAALYKKAFAPLNELAGSLVGKQSPANPAPSRPLNDYVGV MMAR_4623|M.marinum_M LVQYGEVREDWTNLYRQQMSPINTPEGSLVGKQPPVNPEPARPPSDYVGV MAV_1030|M.avium_104 LVQYGQIREDWAALYRKAIGWLNNPLGSLVGKQPPSAPAPARPLRDYTGV Mflv_1757|M.gilvum_PYR-GCK LVQFGEIRQDWAALYGKAFADMDKPVGSLVGQQRHVNAQTHGPLDSYTGV Mvan_4990|M.vanbaalenii_PYR-1 LVQFGEIRQDWYALYAKAFEDMDKPVGSLVGQQRPANAQAHGPLAAYTGV MSMEG_5637|M.smegmatis_MC2_155 LVQFGEVRQDWRKLYADAFASMDGPEGELVGKKPPAVPAPARPLPDYVGV TH_0096|M.thermoresistible__bu LVQFGEIREDWYRLYRELMAPLEQPQGSLVGRPRPADPAPPAPLSTYVGT MLBr_01782|M.leprae_Br4923 ARTYGHFGQ----------------SGGFIWADPEAELALVVLTDRDFGE MAB_0330|M.abscessus_ATCC_1997 LAIYSPAEQT-----------------TVVALLNTDVAKQPAQPSTLFGT MUL_1772|M.ulcerans_Agy99 PGAYGTWWQADPG--------ADLILLYLIQHCPDLSVNAAAAVAGNPGL :. : .: * Mb0931|M.bovis_AF2122/97 YANDYWGPATVTYHDGQLRLSLGPKN--------QTFDLTHWDGDTFTFT Rv0907|M.tuberculosis_H37Rv YANDYWGPATVTYHDGQLRLSLGPKN--------QTFDLTHWDGDTFTFT MMAR_4623|M.marinum_M YANDYWGPATVTERDGQLQLSMGPKN--------QTFDLTHWDGDTFTFA MAV_1030|M.avium_104 YANDYWGPAVITEHDGALQLTMGPQH--------RTATLTHWDGDTFTFP Mflv_1757|M.gilvum_PYR-GCK YGNDYWGPATVTERDGRLQLALGPR---------GVFELDAWDGNVFVFP Mvan_4990|M.vanbaalenii_PYR-1 YRNDYWGPATVTERDGHLELALGPR---------GVFKLQPWDGNVFTFP MSMEG_5637|M.smegmatis_MC2_155 YRNDYWGPATVTEQDGALQLALGPK---------FKARLTHWDGDVFTFR TH_0096|M.thermoresistible__bu YHNDYWGPARVTERDGKLVLDMGPPDARPQPGAPDEFPLTHWDGNVFTFT MLBr_01782|M.leprae_Br4923 WALQLWPAISDAVISEYAR------------------------------- MAB_0330|M.abscessus_ATCC_1997 AITKVISPDHVFLLENAIPQPR---------------------------- MUL_1772|M.ulcerans_Agy99 AKLRTAQPRFVRRTYRALGL------------------------------ . Mb0931|M.bovis_AF2122/97 LSTENALPGSISKATFAG---DTLNLEYYDADKLGTFTR Rv0907|M.tuberculosis_H37Rv LSTENALPGSISKATFAG---DTLNLEYYDADKLGTFTR MMAR_4623|M.marinum_M LSTENALPGSISKATFAG---DTLNLEYFDSNKLGTFTR MAV_1030|M.avium_104 LTGENAPPGTVSTATFTGSPAARLNLEYYDTDQLGTFTR Mflv_1757|M.gilvum_PYR-GCK VSSENAPPGTVSAATFDG---GALTLEYFDQEGNGVFVR Mvan_4990|M.vanbaalenii_PYR-1 VSSENAPPGTVSAATFDA---GSLTLEYFDDEGKGVFTR MSMEG_5637|M.smegmatis_MC2_155 FVSENAPPGTISKATFAG---DKLTLEYFDEDGTGTFTR TH_0096|M.thermoresistible__bu LVTENAPPGTISKATFDG---DRLTLEYYDDVHDGVFVK MLBr_01782|M.leprae_Br4923 --------------------------------------- MAB_0330|M.abscessus_ATCC_1997 --------------------------------------- MUL_1772|M.ulcerans_Agy99 ---------------------------------------