For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VNGDRPAQFRRPQPPIPPQSEPSQVIRRDTLPLRRPAEPSGAPPRQPTSAPPPPKPATGPVGPRRRRRTP TPAPPPRPAAPKARRKKTERRWGKIVALSLLTAVLLAGAGILGGALWLDTALHREPVLRDYADRPGPGRG TNWLIVGSDSRQGLTTEQQQELTTGGDPGDGRTDTILLVHLAGLGSSTPTALVSIPRDSYVPVRGYGRDK INAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQL DGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAENPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDL ARLGWALHGHPTALAVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGPP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_5013 | - | - | 100% (409) | transcriptional regulatory protein |
M. ulcerans Agy99 | MUL_2613 | - | 2e-31 | 33.44% (302) | hypothetical protein MUL_2613 |
M. ulcerans Agy99 | MUL_4040 | cpsA | 2e-23 | 26.70% (352) | membrane protein CpsA |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3870 | - | 5e-40 | 66.95% (118) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_1142 | - | 1e-135 | 61.18% (407) | cell envelope-related transcriptional attenuator |
M. tuberculosis H37Rv | Rv3840 | - | 5e-40 | 66.95% (118) | transcriptional regulatory protein |
M. leprae Br4923 | MLBr_00750 | - | 3e-32 | 31.60% (307) | hypothetical protein MLBr_00750 |
M. abscessus ATCC 19977 | MAB_0128c | - | 1e-106 | 59.74% (308) | transcriptional regulator |
M. marinum M | MMAR_5392 | - | 0.0 | 97.56% (409) | transcriptional regulatory protein |
M. avium 104 | MAV_0185 | - | 1e-129 | 71.06% (311) | transcriptional regulator |
M. smegmatis MC2 155 | MSMEG_6421 | - | 1e-136 | 57.37% (441) | transcriptional regulator |
M. thermoresistible (build 8) | TH_3471 | - | 1e-30 | 36.97% (238) | PUTATIVE cell envelope-related transcriptional attenuator |
M. vanbaalenii PYR-1 | Mvan_5665 | - | 1e-113 | 65.89% (302) | cell envelope-related transcriptional attenuator |
CLUSTAL 2.0.9 multiple sequence alignment Mb3870|M.bovis_AF2122/97 -------------------------------------------------- Rv3840|M.tuberculosis_H37Rv -------------------------------------------------- MUL_5013|M.ulcerans_Agy99 -------------------------------------------------- MMAR_5392|M.marinum_M -------------------------------------------------- MAV_0185|M.avium_104 -------------------------------------------------- Mflv_1142|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_5665|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_6421|M.smegmatis_MC2_155 MAQRNRPQGHRPGPPAGARRRPRRPRPRRADRVTRARVLRRGPHPGPECR MAB_0128c|M.abscessus_ATCC_199 -------------------------------------------------- MLBr_00750|M.leprae_Br4923 -------------------------------------------------- TH_3471|M.thermoresistible__bu -------------------------------------------------- Mb3870|M.bovis_AF2122/97 -------------------------------------------------- Rv3840|M.tuberculosis_H37Rv -------------------------------------------------- MUL_5013|M.ulcerans_Agy99 -------------------------------------------------- MMAR_5392|M.marinum_M -------------------------------------------------- MAV_0185|M.avium_104 -------------------------------------------------- Mflv_1142|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_5665|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_6421|M.smegmatis_MC2_155 RRTRRVVRHVVAHPGAARLGLCQRVGRGDHRRGFPAHPPAPTRHQPHAGV MAB_0128c|M.abscessus_ATCC_199 -------------------------------------------------- MLBr_00750|M.leprae_Br4923 -------------------------------------------------- TH_3471|M.thermoresistible__bu -------------------------------------------------- Mb3870|M.bovis_AF2122/97 -------------------------------------------------- Rv3840|M.tuberculosis_H37Rv -------------------------------------------------- MUL_5013|M.ulcerans_Agy99 -------------------------------------------------- MMAR_5392|M.marinum_M -------------------------------------------------- MAV_0185|M.avium_104 -------------------------------------------------- Mflv_1142|M.gilvum_PYR-GCK ---------------------------------------MTHERPPFPER Mvan_5665|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_6421|M.smegmatis_MC2_155 GALGAAARGLPPLPGLQRGPGQSGDGPGVRLRVAAHRAAVAADHRPHSDR MAB_0128c|M.abscessus_ATCC_199 -------------------------------------------------- MLBr_00750|M.leprae_Br4923 -------------------------------------------------- TH_3471|M.thermoresistible__bu -------------------------------------------------- Mb3870|M.bovis_AF2122/97 -------------------------------------------------- Rv3840|M.tuberculosis_H37Rv -------------------------------------------------- MUL_5013|M.ulcerans_Agy99 -------------------------------------------------- MMAR_5392|M.marinum_M -------------------------------------------------- MAV_0185|M.avium_104 -------------------------------------------------- Mflv_1142|M.gilvum_PYR-GCK R------------------------------------------------- Mvan_5665|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_6421|M.smegmatis_MC2_155 RGRVRRVCPVGATSRLVAVAATYIAEMNGFTPADGDRDPRMRRPGTPRPS MAB_0128c|M.abscessus_ATCC_199 -------------------------------------------------- MLBr_00750|M.leprae_Br4923 -------------------------------------------------- TH_3471|M.thermoresistible__bu -------------------------------------------------- Mb3870|M.bovis_AF2122/97 -------------------------------------------------- Rv3840|M.tuberculosis_H37Rv -------------------------------------------------- MUL_5013|M.ulcerans_Agy99 ---MNGDRPAQFRRPQPPIPPQSEPSQVIRRDTLPLRRPAEPSGAPPRQP MMAR_5392|M.marinum_M ---MNGDRPAQFRRPQPPIPPQSEPSQVIRRDTLPLRRPAEPTGTPPHQP MAV_0185|M.avium_104 -------------------------------------------------- Mflv_1142|M.gilvum_PYR-GCK -EPPQVIRRDPNRRPPWPP---NPPTPARRPIPPPHRARAVPPPPPPRRP Mvan_5665|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_6421|M.smegmatis_MC2_155 GEPSQFIRRDPNYRPPQPPPRPAPPPPARRVPPPPPRQAPPPPPRRPAAP MAB_0128c|M.abscessus_ATCC_199 -------------------------------------------------- MLBr_00750|M.leprae_Br4923 -------------------------------------------------- TH_3471|M.thermoresistible__bu -------------------------------------------------- Mb3870|M.bovis_AF2122/97 -------------------------------------------------- Rv3840|M.tuberculosis_H37Rv -------------------------------------------------- MUL_5013|M.ulcerans_Agy99 TSAPPPPKPATG--------------PVGPRRRRRTPTPAPPPRPAAPKA MMAR_5392|M.marinum_M TSAPPPPRPATG--------------PVGPRRRRRTPAPAPPPRPAAPKA MAV_0185|M.avium_104 -------------------------------------------------- Mflv_1142|M.gilvum_PYR-GCK PPPRPPAPRPP---------PPR-------------PPAPRPPAPVAAAP Mvan_5665|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_6421|M.smegmatis_MC2_155 PPAPPPPGRSPGQSPGQSSRPPRQFPPPPTRRKTSTPTAAAQSAPPAPTV MAB_0128c|M.abscessus_ATCC_199 -------------------------------------------------- MLBr_00750|M.leprae_Br4923 -------------------------------------------------- TH_3471|M.thermoresistible__bu -------------------------------------------------- Mb3870|M.bovis_AF2122/97 -------------------------------------------------- Rv3840|M.tuberculosis_H37Rv -------------------------------------------------- MUL_5013|M.ulcerans_Agy99 RRKKTERRWGKIVALSLLTAVLLAGAGILGGALWLDTALHREPVLRDYAD MMAR_5392|M.marinum_M RRKKTKRRWGKIVALSLLTAVLLAGAGILGGALWLDTALHREPVLRDYAD MAV_0185|M.avium_104 ------------MASALLVVLLLAGVGLGAGVAWFDTKLHREPVLADYPG Mflv_1142|M.gilvum_PYR-GCK RKPRRVRRW----FRIALACLLLIAVAGVAVGAWIDSSLSRLPALTDYAG Mvan_5665|M.vanbaalenii_PYR-1 ---------------------MLLAAGTVAAGVWIDSALTRISALTDYSD MSMEG_6421|M.smegmatis_MC2_155 RKPRRRRRW----GRIVLALLMIAVLAGAGAMIWVDTSLQRIPALAGYPE MAB_0128c|M.abscessus_ATCC_199 -----------------MTLMLLGFCGVIGTALWLDGRLHHVDALKDYPD MLBr_00750|M.leprae_Br4923 ---MPVQRVVRAVVTALTLAIVLGTGITWTSFRSFEDGIFHMSAP--SLG TH_3471|M.thermoresistible__bu ----VPARLIRALAVATAVVIVLSTGVAWSRIRAFEAGISQISSP--LLG Mb3870|M.bovis_AF2122/97 -----------MAGCIQR--------------FSHVRCLG---------- Rv3840|M.tuberculosis_H37Rv -----------MAGCIQR--------------FSHVRCLG---------- MUL_5013|M.ulcerans_Agy99 RPGPGRGTNWLIVGSDSRQGLT----TEQQQELTTGGDPGDGRTDTILLV MMAR_5392|M.marinum_M RPGPGRGTNWLIVGSDSRQGLT----TEQQRELTTGGDPGDGRTDTILLV MAV_0185|M.avium_104 RPEPGRGSNWLIVGSDSRQGLS----AEQQQQLATGGDIGDGRTDTILLV Mflv_1142|M.gilvum_PYR-GCK RPPAGAGTTWLLVGSDGREGLT----PEQQAELTTGGDLGASRTDTILLV Mvan_5665|M.vanbaalenii_PYR-1 RPAQGEGTTWLLVGSDGREGLT----PEQQAELATGGDLGASRTDTILVV MSMEG_6421|M.smegmatis_MC2_155 RPAAGRGTTWLLVGSDSREGLT----PEQQASLTTGGDLGTGRTDTILLV MAB_0128c|M.abscessus_ATCC_199 RPATGSGTNWLLVGSDSRQGLT----PDQETQLATGGDIGDGRTDTILLV MLBr_00750|M.leprae_Br4923 KGGNDGAIDILLVGLDSRTDAYGNPLSAEELATLRAGDEEATNTDTIILI TH_3471|M.thermoresistible__bu QGGEDGAVDILLVGMDSRTDAHGNPLSAEELAALRAGNDVATNTDTIVLV :.* * Mb3870|M.bovis_AF2122/97 --PGLASDNPTTLISIPRDSYVPIPGHGRDKINAAFALG----------- Rv3840|M.tuberculosis_H37Rv --PGLASDNPTTLISIPRDSYVPIPGHGRDKINAAFALG----------- MUL_5013|M.ulcerans_Agy99 HLAGLGSSTPTALVSIPRDSYVPVRGYGRDKINAAFAIG----------- MMAR_5392|M.marinum_M HLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIG----------- MAV_0185|M.avium_104 HLPGVGSGVAPTMVSIPRDSYVPIPEHGKDKINAAFAMG----------- Mflv_1142|M.gilvum_PYR-GCK HLPGIGSSTPATMVSIPRDSYVPIPEYGSDKINAAFSLG----------- Mvan_5665|M.vanbaalenii_PYR-1 HLPGLGSATPATMVSIPRDSYVSIPEYGSDKINAAFSVG----------- MSMEG_6421|M.smegmatis_MC2_155 HIPALGSSTPATMVSIPRDSYVEIPGYGEDKINAAFALG----------- MAB_0128c|M.abscessus_ATCC_199 HIPAFYDGGAATMVSLPRDSYVSIPENGSNKLNAAYSLG----------- MLBr_00750|M.leprae_Br4923 RIPNNGKS--ATAISIPRDSYVQAPGLGKAKINGVYGQTREAKRASLVRT TH_3471|M.thermoresistible__bu RIPNNGRS--ATAISIPRDSYVEAPGRGKMKINGVYGEVKFETMKQLVEV . .: :*:****** * *:*..:. Mb3870|M.bovis_AF2122/97 ---------------GGRLLTQTVELATGLHLDHYAEVGFSEFADLVDAF Rv3840|M.tuberculosis_H37Rv ---------------GGRLLTQTVELATGLHLDHYAEVGFSEFADLVDAF MUL_5013|M.ulcerans_Agy99 ---------------GAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDAL MMAR_5392|M.marinum_M ---------------GAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDAL MAV_0185|M.avium_104 ---------------GATLLVRTVEQATGLRIAHYAEIGFGGFAALVDAL Mflv_1142|M.gilvum_PYR-GCK ---------------GPPLLAQTVEQATGLRIDHYAEVGFGGFAGMVDAV Mvan_5665|M.vanbaalenii_PYR-1 ---------------GPRLLARTVELATGLRIDHYAEIGFGGFAELVDAV MSMEG_6421|M.smegmatis_MC2_155 ---------------GAPLLAQTVESATGLRLDHYAEIGFGGFASLVDAV MAB_0128c|M.abscessus_ATCC_199 ---------------GPALLTRTVEEATGLRIDHYAEIGFNGFASVVDAI MLBr_00750|M.leprae_Br4923 -GDSAEDAAAQGTEAGREALIKTVADLTGVTVDHYAEIGLLGFALIVDAL TH_3471|M.thermoresistible__bu QGMDPEVAEPLAVQDARGALIETVAELTGVTVDHYAEIGLLGFALITDAL . * .** **: : ****:*: ** :.**. Mb3870|M.bovis_AF2122/97 ------------DPLAGVDLPAGCQTLDGRAALGYVRTR-ATPRADLE-- Rv3840|M.tuberculosis_H37Rv ------------DPLAGVDLPAGCQTLDGRAALGYVRTR-ATPRADLE-- MUL_5013|M.ulcerans_Agy99 GGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSR-ATPRADLDRM MMAR_5392|M.marinum_M GGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSR-ATPRADLDRM MAV_0185|M.avium_104 GGVRVCPQAPMHDPLAGLDLPAGCQTLDGRNALAYVRSR-DTPRADLDRM Mflv_1142|M.gilvum_PYR-GCK GGVTVCPAEPINDPLAGIDLPAGCQELDGRNALGYVRSR-ATARADLDRM Mvan_5665|M.vanbaalenii_PYR-1 GGVTMCPEAPISDPLAGIDLPAGCQRLDGRTALGYVRSR-ATARADLDRM MSMEG_6421|M.smegmatis_MC2_155 GGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVRTR-ATARADLDRM MAB_0128c|M.abscessus_ATCC_199 GGVSMCLDEPIQDPLAGIDLTPGCQILNGPSALGYVRSR-ATPRADLDRM MLBr_00750|M.leprae_Br4923 GGVDVCLKDAVFEPMSGADFPAGRQKLNGPQALSFVRQRHELPRGDLDRV TH_3471|M.thermoresistible__bu GGVEVCLKNPVYEPLSGADFPAGWQRLDGAQALSFVRQRQDLPRGDLDRV :*::* *:..* * *:* **.:** * .*.**: Mb3870|M.bovis_AF2122/97 -------------------------------------------------- Rv3840|M.tuberculosis_H37Rv -------------------------------------------------- MUL_5013|M.ulcerans_Agy99 INQRQFMSALLRRAENPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLAR MMAR_5392|M.marinum_M INQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLAR MAV_0185|M.avium_104 VNQRQFVAALLHRAASPAVWLNPWRWYAAPRAVADSLTVDRADHAWDLAR Mflv_1142|M.gilvum_PYR-GCK ANQRQFMSALIERASSPAVLLNPLRWYPLASAAADTVAVDDGDHVWDLAR Mvan_5665|M.vanbaalenii_PYR-1 ANQRQFMSALVDRAASPTVLLNPLKWYPMARAAADTVTVNDGDHIWDLAR MSMEG_6421|M.smegmatis_MC2_155 IHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLAR MAB_0128c|M.abscessus_ATCC_199 THQRAFMSALFHRVSSPAVWANPFRWYPVATSTADAITLAEGDHSWNLAQ MLBr_00750|M.leprae_Br4923 VRQQAVMASLVHRVISGQTLSNPSTIKHLEQAIQRSVVISSGWNLMDFLK TH_3471|M.thermoresistible__bu TRQQTVMASLAREVISSKTLSSPATLDRLQRAIQRSVVLSDGWDVMEFVE Mb3870|M.bovis_AF2122/97 ----------------------------------------------GSDV Rv3840|M.tuberculosis_H37Rv ----------------------------------------------GSDV MUL_5013|M.ulcerans_Agy99 LGWALHGHPTALA----VPIGEFTTTDVGSVVVWNHDAAAEMFDALASDT MMAR_5392|M.marinum_M LGWALHGHPTALT----VPIGEFTTTDVGSVVVWNHDAAAEMFDALASDT MAV_0185|M.avium_104 LGWALHGSPATVT----VPIGEFTSGDAGSVVVWDHARAARLFDALSSDG Mflv_1142|M.gilvum_PYR-GCK LGWALRGDVTTVT----VPIGEFTENSAGSIVVWDSETAQRLFAALASDS Mvan_5665|M.vanbaalenii_PYR-1 LAWALRGDIVNVT----VPIGEFTENGSGSIVVWDSEAAQRLFGALASDT MSMEG_6421|M.smegmatis_MC2_155 LAWSLRGDPVTMT----VPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDA MAB_0128c|M.abscessus_ATCC_199 LGWALAGSVQNLT----MPIGSFSENWAGDIVTWDQDASSRLFDALRTGQ MLBr_00750|M.leprae_Br4923 QLQSLADRKVAFATIPVLDETGWSDDGMQSVVRVDPHQVQNFVSGLLHNQ TH_3471|M.thermoresistible__bu QLQGLAAGNIAFATIPIVREDGWSDDGMQSVVRVDPQQVRDWVSSLLEEQ Mb3870|M.bovis_AF2122/97 P-------------VPAAAFETQP-------------------------- Rv3840|M.tuberculosis_H37Rv P-------------VPAAAFETQP-------------------------- MUL_5013|M.ulcerans_Agy99 P-------------IPADAFDGPP-------------------------- MMAR_5392|M.marinum_M P-------------IPADAFDGPP-------------------------- MAV_0185|M.avium_104 Q-------------LPAGSTDEQQPSS----------------------- Mflv_1142|M.gilvum_PYR-GCK P-------------VPADVLEAGNR------------------------- Mvan_5665|M.vanbaalenii_PYR-1 P-------------VPQDVLDAANP------------------------- MSMEG_6421|M.smegmatis_MC2_155 P-------------VPPDVLENAVN------------------------- MAB_0128c|M.abscessus_ATCC_199 Q-------------IPADLLPDPATPTP---------------------- MLBr_00750|M.leprae_Br4923 AQDKTDELAYTPAKITANVANDTDINGLAAAVSDILTTKGFIAGSVANNQ TH_3471|M.thermoresistible__bu DEGKTEEIAYSRDKTTVEVLNGTDINGLAAAVSHVLTSNGFSPGPVGNAE . Mb3870|M.bovis_AF2122/97 -------------------------------------------------- Rv3840|M.tuberculosis_H37Rv -------------------------------------------------- MUL_5013|M.ulcerans_Agy99 -------------------------------------------------- MMAR_5392|M.marinum_M -------------------------------------------------- MAV_0185|M.avium_104 -------------------------------------------------- Mflv_1142|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_5665|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_6421|M.smegmatis_MC2_155 -------------------------------------------------- MAB_0128c|M.abscessus_ATCC_199 -------------------------------------------------- MLBr_00750|M.leprae_Br4923 GSHVKSSQVRAAKSDDLGAQKVSKELGGLPIVVDGSIPAGSVLVILANDY TH_3471|M.thermoresistible__bu DGPADRTEVRVAKQDDRGAREVADQLGDLPIVEDRTVAPGFVRVVLADDY Mb3870|M.bovis_AF2122/97 ------------------------------------------------- Rv3840|M.tuberculosis_H37Rv ------------------------------------------------- MUL_5013|M.ulcerans_Agy99 ------------------------------------------------- MMAR_5392|M.marinum_M ------------------------------------------------- MAV_0185|M.avium_104 ------------------------------------------------- Mflv_1142|M.gilvum_PYR-GCK ------------------------------------------------- Mvan_5665|M.vanbaalenii_PYR-1 ------------------------------------------------- MSMEG_6421|M.smegmatis_MC2_155 ------------------------------------------------- MAB_0128c|M.abscessus_ATCC_199 ------------------------------------------------- MLBr_00750|M.leprae_Br4923 TGPGSGLFGNGSIASDYASNPGASADPNIPVPSP--ILTAGSDQPECIN TH_3471|M.thermoresistible__bu TGPGSGLDGTDPTVTTLQQSSATVGQTVEAAPPPPQIITAGADDPKCVN