For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AGNSQRRGAIRKSGTKKGTSVGSGGQRRRGLEGRGPTPSAHMRPNHPAAKRAKAQQRRPARGRTDETETV LGRNPVLECLRAGVPSTALYVALGVEADERLTESVSRAADSGIPILEVPRTDLDRMTANHLHQGIALQVP PYNYAHPDDLLAAALDTPPALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGA AARMPVARATNLTRALKDWADRGVRVVGLDAGGDTAIDDLDGSDPIVVVVGSEGKGLSRLVRQTCDEVVS VPMAGPTESLNASVAAGVVLAEIARQRRT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_4155 | - | - | 100% (310) | tRNA/rRNA methyltransferase |
| M. ulcerans Agy99 | MUL_0269 | - | 6e-17 | 28.96% (221) | rRNA methyltransferase |
| M. ulcerans Agy99 | MUL_1630 | tsnR | 8e-14 | 29.81% (161) | 23S rRNA methyltransferase TsnR |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3610c | - | 1e-151 | 86.41% (309) | putative tRNA/rRNA methyltransferase |
| M. gilvum PYR-GCK | Mflv_1447 | - | 1e-136 | 80.19% (313) | RNA methyltransferase |
| M. tuberculosis H37Rv | Rv3579c | - | 1e-152 | 87.06% (309) | tRNA/rRNA methyltransferase |
| M. leprae Br4923 | MLBr_00324 | - | 1e-130 | 83.09% (278) | putative methyltransferase |
| M. abscessus ATCC 19977 | MAB_0572 | - | 1e-134 | 77.60% (317) | putative tRNA/rRNA methyltransferase |
| M. marinum M | MMAR_5079 | - | 1e-174 | 99.68% (310) | tRNA/rRNA methyltransferase |
| M. avium 104 | MAV_0574 | - | 1e-155 | 88.03% (309) | RNA methyltransferase, TrmH family protein, group 3 |
| M. smegmatis MC2 155 | MSMEG_6073 | - | 1e-137 | 79.68% (315) | RNA methyltransferase, TrmH family protein, group 3 |
| M. thermoresistible (build 8) | TH_1749 | - | 1e-109 | 82.92% (240) | POSSIBLE TRNA/RRNA METHYLTRANSFERASE |
| M. vanbaalenii PYR-1 | Mvan_5337 | - | 1e-140 | 81.85% (314) | RNA methyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1447|M.gilvum_PYR-GCK MAGNSQRRGAVRKAGTKKGPQVGSGGVRRRGLEGRGATPPAHERPHHPAG
Mvan_5337|M.vanbaalenii_PYR-1 MAGNSQRRGAVRKAGTKKGPTVGSGGVRRRGLEGKGATPPAHQRPHHPAG
MSMEG_6073|M.smegmatis_MC2_155 MAGNSQRRGAVRKPGTKKGPTVGSGGVRRRGLEGRGATPPAHMRPNHPAA
MUL_4155|M.ulcerans_Agy99 MAGNSQRRGAIRKSGTKKGTSVGSGGQRRRGLEGRGPTPSAHMRPNHPAA
MMAR_5079|M.marinum_M MAGNSQRRGAIRKSGTKKGTSVGSGGQRRRGLEGRGPTPPAHMRPNHPAA
Mb3610c|M.bovis_AF2122/97 MPGNSRRRGAVRKSGTKKGAGVGSGGQRRRGLEGRGPTPPAHLRPHHPAA
Rv3579c|M.tuberculosis_H37Rv MPGNSRRRGAVRKSGTKKGAGVGSGGQRRRGLEGRGPTPPAHLRPHHPAA
MLBr_00324|M.leprae_Br4923 -------------------------------MEGRGPTPPAYLRPNHPAA
MAV_0574|M.avium_104 MAGNSRRRGAVRKAGTKKGPTVGSGGQRRRGLEGRGPTPPAHLRPNHPAA
TH_1749|M.thermoresistible__bu --------------------------------------------------
MAB_0572|M.abscessus_ATCC_1997 MAGNSQRRGAVRKPGTKKGPTVGSGGVRRRGLEGKGATPPAEQRTKHPAA
Mflv_1447|M.gilvum_PYR-GCK KRAAKAARQAQGRH---KKTDDTEIVLGRNPVVECLRAGVPATALYVALG
Mvan_5337|M.vanbaalenii_PYR-1 KRAAKAARQAQGRH---KKTDDTEIVLGRNPVLECLRAGVPATALYVALG
MSMEG_6073|M.smegmatis_MC2_155 KKARAAAKAQQQRAG--RKADETELVLGRNPVLECLRAKVPATALYVALG
MUL_4155|M.ulcerans_Agy99 KRAKAQQRR-PARG----RTDETETVLGRNPVLECLRAGVPSTALYVALG
MMAR_5079|M.marinum_M KRAKAQQRR-PARG----RTDETETVLGRNPVLECLRAGVPSTALYVALG
Mb3610c|M.bovis_AF2122/97 KRARAQPRR-PVK-----RADETETVLGRNPVLECLRAGVPATALYVALG
Rv3579c|M.tuberculosis_H37Rv KRARAQPRR-PVK-----RADETETVLGRNPVLECLRAGVPATALYVALG
MLBr_00324|M.leprae_Br4923 KRNQSSPHR-PVK-----RTDETETVLGRNPVLECLRAGVPATALYVALG
MAV_0574|M.avium_104 KRAQSPPRR-PAK-----RTEETETVLGRNPVLECLRAGVPATALYVALG
TH_1749|M.thermoresistible__bu -------------------------VLGRNPVVECLRAEVPATALYVALG
MAB_0572|M.abscessus_ATCC_1997 KRAAVQRKIADAKQRRLKQGDEAEMVLGRNPVLECLRTGVPATALYVAVG
*******:****: **:******:*
Mflv_1447|M.gilvum_PYR-GCK TDADERLTESVQMAADRGISILEVQRHDLDRMAANGLHQGIALQVPPYAY
Mvan_5337|M.vanbaalenii_PYR-1 ADSDERLTESVQIAADKGIAILEVPRHDLDRIAANGMHQGIALQVPPYNY
MSMEG_6073|M.smegmatis_MC2_155 TDADERVTESVQIAADRGISILEVPRTDLDRMSNHGLHQGLGLQVPPYAY
MUL_4155|M.ulcerans_Agy99 VEADERLTESVSRAADSGIPILEVPRTDLDRMTANHLHQGIALQVPPYNY
MMAR_5079|M.marinum_M VEADERLTESVSRAADSGIPILEVPRTDLDRMTANHLHQGIALQVPPYNY
Mb3610c|M.bovis_AF2122/97 TEADERLTECVARAADSGIAIVELLRADLDRMTANHLHQGIALQVPPYNY
Rv3579c|M.tuberculosis_H37Rv TEADERLTECVARAADSGIAIVELLRADLDRMTANHLHQGIALQVPPYNY
MLBr_00324|M.leprae_Br4923 TEVDKRLTESVMRAADVGVAILEVPRTYLDRITNNHLHQGIALQVPPYHY
MAV_0574|M.avium_104 TEADERLTESVSRAADSGISILEVPRADLDRMTGNHLHQGIALQVPPYIY
TH_1749|M.thermoresistible__bu TEADERLTEAVRLAADAGISILEVPRHDLDRISANGLHQGIALQVPPYQY
MAB_0572|M.abscessus_ATCC_1997 ADNDERLTESVALAADAGIAILEVPRPDLDRMSTNGLHQGLALQIPPYKY
.: *:*:**.* *** *:.*:*: * ***:: : :***:.**:*** *
Mflv_1447|M.gilvum_PYR-GCK AHPDDLLRDAKSDAAPALLVALDNISDPRNLGAIVRSVAAFGGHGVVLPQ
Mvan_5337|M.vanbaalenii_PYR-1 AHPDDLLAEAKSDAMPALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQ
MSMEG_6073|M.smegmatis_MC2_155 AHPDDLLATARADAAPALLVALDNISDPRNLGAIVRSVAAFAGHGVVIPQ
MUL_4155|M.ulcerans_Agy99 AHPDDLLA-AALDTPPALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQ
MMAR_5079|M.marinum_M AHPDDLLA-AALDTPPALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQ
Mb3610c|M.bovis_AF2122/97 AHPDDLLA-AALDQPPALLVALDNLSDPRNLGAIMRSVAAFGGHGVLIPQ
Rv3579c|M.tuberculosis_H37Rv AHPDDLLA-AALDQPPALLVALDNLSDPRNLGAIVRSVAAFGGHGVLIPQ
MLBr_00324|M.leprae_Br4923 VHSDDLLA-AATDSPPALLVALDNISDPRNLGAIVRSVAAFSGHGILIPQ
MAV_0574|M.avium_104 AHPDDLLE-AAAGSPPALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQ
TH_1749|M.thermoresistible__bu AHPDDLLERATTDTEPALLVALDNISDPRNLGAIVRSVAAFAGHGVVIPQ
MAB_0572|M.abscessus_ATCC_1997 AHPDDLLARARAEAQPALLVALDNISDPRNLGAIVRSVAAFGGHGVVIPQ
.*.**** * *********:*********:******.***:::**
Mflv_1447|M.gilvum_PYR-GCK RRSASVTAVAWRTSAGAAARTPVARATNLNRTLKQYADAGLQVVGLDAGG
Mvan_5337|M.vanbaalenii_PYR-1 RRSASVTAVAWRTSAGAAARTPVARATNLTRALKQWADAGLQVVGLDADG
MSMEG_6073|M.smegmatis_MC2_155 RRSASVTAVAWRTSAGAAARVPVARATNLNRTLKSFADAGLQIVGLDAGG
MUL_4155|M.ulcerans_Agy99 RRSASVTAVAWRTSAGAAARMPVARATNLTRALKDWADRGVRVVGLDAGG
MMAR_5079|M.marinum_M RRSASVTAVAWRTSAGAAARMPVARATNLTRALKDWADRGVRVVGLDAGG
Mb3610c|M.bovis_AF2122/97 RRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIGLDAGG
Rv3579c|M.tuberculosis_H37Rv RRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIGLDAGG
MLBr_00324|M.leprae_Br4923 RRSASVTAVAWRTSAGAAARIPVARATNLTRALKVWADQGLRVIGLDHDG
MAV_0574|M.avium_104 RRSASVTAVAWRTSAGAAARIPVARATNLTRTLQDWADRGLRVIGLDAGG
TH_1749|M.thermoresistible__bu RRSASVTAVAWRTSAGAAARVPVARATNLNRTLKNWADAGLMIVGLDAGG
MAB_0572|M.abscessus_ATCC_1997 RRSASVTAVAWRTSAGAAARLPVARATNLTRTLKDWQDKGITIVGLDAGG
******************** ********.*:*: : * *: ::*** .*
Mflv_1447|M.gilvum_PYR-GCK DTTIDEIDGLTPTIVVVGSEGKGLSRLVRENCDRIVSIPMAGPTESLNAS
Mvan_5337|M.vanbaalenii_PYR-1 DTTVDQIDGAGPIVVVVGSEGKGLSRLVRENCDAVVSIPMAGPTESLNAS
MSMEG_6073|M.smegmatis_MC2_155 DTTLDELDATGPTVVVVGSEGKGLSRLVREHCDAIVSIPMAGPTESLNAS
MUL_4155|M.ulcerans_Agy99 DTAIDDLDGSDPIVVVVGSEGKGLSRLVRQTCDEVVSVPMAGPTESLNAS
MMAR_5079|M.marinum_M DTAIDDLDGSDPIVVVVGSEGKGLSRLVRQTCDEVVSVPMAGPTESLNAS
Mb3610c|M.bovis_AF2122/97 GTALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIPMAAQAESLNAS
Rv3579c|M.tuberculosis_H37Rv GTALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIPMAAQAESLNAS
MLBr_00324|M.leprae_Br4923 DTALDDLDGTDPLAVVVGSEGKGLSRLVRHSCDEVVSIPMAGQVESLNAS
MAV_0574|M.avium_104 DTTLDDLDGSDPLVVVVGSEGKGLSRLVRQNCDEVVSIPMAGSAESLNAS
TH_1749|M.thermoresistible__bu DTTLDELDGTTPLVVVVGSEGKGLSRLVRENCDLVVSIPMAGPAESLNAS
MAB_0572|M.abscessus_ATCC_1997 DTELDNLDGVGDIAVVVGSEGKGLSQLVRKTCDAVVSIPMAGPVESLNAS
.* :*::*. ***********:***. ** :**:***. .******
Mflv_1447|M.gilvum_PYR-GCK VAAGVVLAEIARQRRLS---------------------------------
Mvan_5337|M.vanbaalenii_PYR-1 VAAGVVLAEIARQRRSA---------------------------------
MSMEG_6073|M.smegmatis_MC2_155 VAAGVVLAEIARQRRS----------------------------------
MUL_4155|M.ulcerans_Agy99 VAAGVVLAEIARQRRT----------------------------------
MMAR_5079|M.marinum_M VAAGVVLAEIARQRRT----------------------------------
Mb3610c|M.bovis_AF2122/97 VAAGVVLAAIARQRRRPREPREQDAESHDLSSNHAILRLLAPLRLDPQNL
Rv3579c|M.tuberculosis_H37Rv VAAGVVLAEIARQRRRPREPREQ-------TQNRMI--------------
MLBr_00324|M.leprae_Br4923 VAVGVVLAEIARQRRL----------------------------------
MAV_0574|M.avium_104 VAAGVVLAEISRQRRG----------------------------------
TH_1749|M.thermoresistible__bu VAAGVVLADIARQRRR----------------------------------
MAB_0572|M.abscessus_ATCC_1997 VAAGVVLAEIARQRR-----------------------------------
**.***** *:****
Mflv_1447|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5337|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6073|M.smegmatis_MC2_155 --------------------------------------------------
MUL_4155|M.ulcerans_Agy99 --------------------------------------------------
MMAR_5079|M.marinum_M --------------------------------------------------
Mb3610c|M.bovis_AF2122/97 GAGPQREHRHRQGRRHGAQSQSGVLADAGVDVVPAQHAPPQQVRQRTGIG
Rv3579c|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_00324|M.leprae_Br4923 --------------------------------------------------
MAV_0574|M.avium_104 --------------------------------------------------
TH_1749|M.thermoresistible__bu --------------------------------------------------
MAB_0572|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_1447|M.gilvum_PYR-GCK ---------
Mvan_5337|M.vanbaalenii_PYR-1 ---------
MSMEG_6073|M.smegmatis_MC2_155 ---------
MUL_4155|M.ulcerans_Agy99 ---------
MMAR_5079|M.marinum_M ---------
Mb3610c|M.bovis_AF2122/97 QVGSDVDPE
Rv3579c|M.tuberculosis_H37Rv ---------
MLBr_00324|M.leprae_Br4923 ---------
MAV_0574|M.avium_104 ---------
TH_1749|M.thermoresistible__bu ---------
MAB_0572|M.abscessus_ATCC_1997 ---------