For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SPTPRRRATLASLAAELKVSRSTISNAFNRPDQLSVELRERVLATAKRMGYPGPDPVARSLRTRKAGAVG LVMAEPLTYFFSDPAARDFVTGVAQSCEELGQGLLLVAVGASRSLEDGTAAVLNAGVDGFVVYSVRDDDP YLQVVLQRRLPVVVVDQPKELAGVSRVGIDDRAAMRKIADYVLSLGHRQIGLLTMRLGRDRRQDLVDAER LKSPTFDVQRERITGVWEAMTAAGVDPESLTVVESYEHLPTSGGDAAKVALEANPRITALMCTADILALS AMDYLRGHGIYVPGQMTVTGFDGVPEAISRGLTTVSQPSLQKGRRAGELLQNPPRSGLPVVELLDTELIR GRTAGPPA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_4146 | - | - | 100% (359) | PurR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3606c | - | 0.0 | 89.69% (359) | transcriptional regulatory protein LacI-family |
M. gilvum PYR-GCK | Mflv_1457 | - | 1e-158 | 76.52% (362) | periplasmic binding protein/LacI transcriptional regulator |
M. tuberculosis H37Rv | Rv3575c | - | 0.0 | 89.69% (359) | transcriptional regulatory protein LacI-family |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2023c | - | 2e-06 | 25.00% (228) | LacI family transcriptional regulator |
M. marinum M | MMAR_5070 | - | 0.0 | 99.44% (359) | PurR family transcriptional regulator |
M. avium 104 | MAV_0585 | - | 0.0 | 90.53% (359) | transcriptional regulator, LacI family protein |
M. smegmatis MC2 155 | MSMEG_6044 | - | 1e-153 | 74.38% (363) | ligand-binding /sugar binding domain-containing protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_5317 | - | 1e-159 | 77.41% (363) | periplasmic binding protein/LacI transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1457|M.gilvum_PYR-GCK MSRSPTPRRRATLASLAAELKVSRTTVSNAYNRPDQLSAELRERVLSTAK Mvan_5317|M.vanbaalenii_PYR-1 MPRSPTPRRRATLASLAAELKVSRTTVSNAYNRPDQLSAELRERVLSTAE MSMEG_6044|M.smegmatis_MC2_155 MPRSPHPPRRATLASLAAELKVSRTTISNAYNRPDQLSADLRERIFDAAK MUL_4146|M.ulcerans_Agy99 --MSPTPRRRATLASLAAELKVSRSTISNAFNRPDQLSVELRERVLATAK MMAR_5070|M.marinum_M --MSPTPRRRATLASLAAELKVSRSTISNAFNRPDQLSAELRERVLATAK Mb3606c|M.bovis_AF2122/97 --MSPTPRRRATLASLAAELKVSRTTVSNAFNRPDQLSADLRERVLATAK Rv3575c|M.tuberculosis_H37Rv --MSPTPRRRATLASLAAELKVSRTTVSNAFNRPDQLSADLRERVLATAK MAV_0585|M.avium_104 --MSPTPRRRATLASLADELKVSRTTVSNAFNRPDQLSADLRERVLATAK MAB_2023c|M.abscessus_ATCC_199 -------------------MGLSKTTVADALGGSGRVSEATREKTRLVAE : :*::*:::* . ..::* **: .*: Mflv_1457|M.gilvum_PYR-GCK RLGYPGPDPVARSLRTRRAGAVGLVITEPLNYSFSDPAALDFVAGLAESC Mvan_5317|M.vanbaalenii_PYR-1 RLGYPGPDPVARSLRTRRAGAVGLVITEPLNYSFSDPAALDFVAGLAESC MSMEG_6044|M.smegmatis_MC2_155 RLGYPGPDPVARSLRTRKAGAVGLMITEPLDYSFSDPAALDFVAGLAESC MUL_4146|M.ulcerans_Agy99 RMGYPGPDPVARSLRTRKAGAVGLVMAEPLTYFFSDPAARDFVTGVAQSC MMAR_5070|M.marinum_M RMGYPGPDPVARSLRTRKAGAVGLVMAEPLTYFFSDPAARDFVTGVAQSC Mb3606c|M.bovis_AF2122/97 RLGYAGPDPVARSLRTRKAGAVGLVMAEPLTYFFSDPAARDFVAGVAQSC Rv3575c|M.tuberculosis_H37Rv RLGYAGPDPVARSLRTRKAGAVGLVMAEPLTYFFSDPAARDFVAGVAQSC MAV_0585|M.avium_104 RLGYPGPDPVARSLRTRKAGAVGLVMAEPLTYFFSDPAARDFVTGVAQSC MAB_2023c|M.abscessus_ATCC_199 RMGYVS-NRAARLLRRNETGALGLYIPGDVRNLS---FYMELAFGAADES *:** . : .** ** ..:**:** :. : ::. * *:.. Mflv_1457|M.gilvum_PYR-GCK EAVGQGLLLVAVGPNRSVAEGSAAVLAAGVDGFVVYSASDDDPYLPAVME Mvan_5317|M.vanbaalenii_PYR-1 EAVGQGLLLVAVGPNRSVADGSAAVLAAGVDGFVVYSASDDDPYLPAVLQ MSMEG_6044|M.smegmatis_MC2_155 EEAGQGLLLVAVGPNRTFEEGSNSVLAAGVDGFVVYSASDDDPYLPVLQQ MUL_4146|M.ulcerans_Agy99 EELGQGLLLVAVGASRSLEDGTAAVLNAGVDGFVVYSVRDDDPYLQVVLQ MMAR_5070|M.marinum_M EELGQGLLLVAVGASRSLEDGTAAVLNAGVDGFVVYSVRDDDPYLQVVLQ Mb3606c|M.bovis_AF2122/97 EELGQGLQLVSVGSSRSLADGTAAVLGAGVDGFVVYSVGDDDPYLQVVLQ Rv3575c|M.tuberculosis_H37Rv EELGQGLQLVSVGSSRSLADGTAAVLGAGVDGFVVYSVGDDDPYLQVVLQ MAV_0585|M.avium_104 EALGQGLLLVAVGPSRSLDEGTAAVLSAGVDGFVVYSVCDDDPYLQAVLQ MAB_2023c|M.abscessus_ATCC_199 AALGLDLTLIGR-----HLTGENRSRPPQVDGIIAVDPVPGDAALESLLT * .* *:. * . ***::. . .*. * : Mflv_1457|M.gilvum_PYR-GCK RHLPVVVVDQPRDVPG---ASQVRIDDRAAMRSLAEHVIDLGHREIGLLT Mvan_5317|M.vanbaalenii_PYR-1 RHLPVVVVDQPRDVAG---TSRVCIDDRAAMRRLAEHVIELGHREIGLLT MSMEG_6044|M.smegmatis_MC2_155 RQLPMVVVDQPKDVPG---VSRISIDDRGAMRELAEYVLELGHRDIGLLT MUL_4146|M.ulcerans_Agy99 RRLPVVVVDQPKELAG---VSRVGIDDRAAMRKIADYVLSLGHRQIGLLT MMAR_5070|M.marinum_M RRLPVVVVDQPKELAG---VSRVGIDDRAAMRKIADYVLGLGHRQIGLLT Mb3606c|M.bovis_AF2122/97 RRLPVVVVDQPKDLSG---VSRVGIDDRAAMRELAGYVLGLGHRELGLLT Rv3575c|M.tuberculosis_H37Rv RRLPVVVVDQPKDLSG---VSRVGIDDRAAMRELAGYVLGLGHRELGLLT MAV_0585|M.avium_104 RRLPVVVVDQPKGLTG---VSRVGIDDRAAMRELADYVLGLGHREIGLLT MAB_2023c|M.abscessus_ATCC_199 SNVPIVTVGRILDKDVSHHAAEIEIDHYRMVTLLLDAIRAAGGKRPALAA .:*:*.*.: .:.: **. : : : * : .* : Mflv_1457|M.gilvum_PYR-GCK MRLGRDWPHG-PGPALADPERVRAPNFHVQCERIHGVYDAMTAAGLDPAS Mvan_5317|M.vanbaalenii_PYR-1 MRLGRDRPHGGSTPVLADPERLRTPHFHVQGERIRGVYDAMTAAGLDPGS MSMEG_6044|M.smegmatis_MC2_155 MRLGRDWPHGDPRPALADPERVLSPHFHVQRERIHGVYDAMSAAGLDPSS MUL_4146|M.ulcerans_Agy99 MRLGRDRRQD-----LVDAERLKSPTFDVQRERITGVWEAMTAAGVDPES MMAR_5070|M.marinum_M MRLGRDRRQD-----LVDAERLKSPTFDVQRERITGVWEAMTAAGVDPES Mb3606c|M.bovis_AF2122/97 MRLGRDRRQD-----LVDAERLRSPTFDVQRERIVGVWEAMTAAGVDPDS Rv3575c|M.tuberculosis_H37Rv MRLGRDRRQD-----LVDAERLRSPTFDVQRERIVGVWEAMTAAGVDPDS MAV_0585|M.avium_104 MRLGRDRRQG-----LVDAERLRSPAFDVQRERITGVWEAMTAAGVDPDS MAB_2023c|M.abscessus_ATCC_199 LDQGAD----------------SSYVFDVSR----GYQEWCAKAGVVPLA : * * : *.*. * : : **: * : Mflv_1457|M.gilvum_PYR-GCK LTLVESYEHLPTSGGAGADIALEANPRITALMCTADVLALSAMDHLRAKG Mvan_5317|M.vanbaalenii_PYR-1 LTVVESYEHLPSSGGAGADVALDANPRITALMCTADVLALSAMDHLRAKG MSMEG_6044|M.smegmatis_MC2_155 LTVVESYEHLPTSGGAAAEVALEVNPRITALMCTADVLALSAMDHLRSRG MUL_4146|M.ulcerans_Agy99 LTVVESYEHLPTSGGDAAKVALEANPRITALMCTADILALSAMDYLRGHG MMAR_5070|M.marinum_M LTVVESYEHLPTSGGDAAKVALEANPRITALMCTADILALSAMDYLRGHG Mb3606c|M.bovis_AF2122/97 LTVVESYEHLPTSGGTAAKVALQANPRLTALMCTADILALSAMDYLRAHG Rv3575c|M.tuberculosis_H37Rv LTVVESYEHLPTSGGTAAKVALQANPRLTALMCTADILALSAMDYLRAHG MAV_0585|M.avium_104 LTVVESYEHLPESGGAAAKVALEANPRITALMCTADILALSAMDYLRAHG MAB_2023c|M.abscessus_ATCC_199 TRLSATPTDVELAQAIRGIVEHQG---IDALVVGAQGLAARSLPVLQSLG : : .: : . . : : : **: *: ** :: *:. * Mflv_1457|M.gilvum_PYR-GCK IYVPGQMTVTGFDG--VPEARQRGLTTVAQPGVEKGRRAGELLH--NPPR Mvan_5317|M.vanbaalenii_PYR-1 IYVPGQMTVTGFDG--VPEARRRGLTTVVQPSVEKGRRAGELLH--HPPR MSMEG_6044|M.smegmatis_MC2_155 IYVPGHMTVTGFDG--VRDALRRGLTTVKQPSMEKGRRAGHLLH--NPPG MUL_4146|M.ulcerans_Agy99 IYVPGQMTVTGFDG--VPEAISRGLTTVSQPSLQKGRRAGELLQ--NPPR MMAR_5070|M.marinum_M IYVPGQMTVTGFDG--VPEAISRGLTTVSQPSLQKGRRAGELLQ--NPPR Mb3606c|M.bovis_AF2122/97 IYVPGQMTVTGFDG--VPEALSRGLTTVAQPSLHKGHRAGELLL--KPPR Rv3575c|M.tuberculosis_H37Rv IYVPGQMTVTGFDG--VPEALSRGLTTVAQPSLHKGHRAGELLL--KPPR MAV_0585|M.avium_104 VYVPGQLTVTGFDG--VPDAISRGLTTVSQSSLHKGRRAGELLL--KPAR MAB_2023c|M.abscessus_ATCC_199 HEVGSNFHLGTLVGDPATELTNPDIHAVDLRPREFGHQAVTFLHDIIAGR * .:: : : * . : .: :* . *::* :* . Mflv_1457|M.gilvum_PYR-GCK SGLPVVEVLDTEVIRGRTSGPPA------- Mvan_5317|M.vanbaalenii_PYR-1 SGLPVIEVLDTEMVRGRTSGPPA------- MSMEG_6044|M.smegmatis_MC2_155 SGLPVIDVLETEVVRGRTSGPPA------- MUL_4146|M.ulcerans_Agy99 SGLPVVELLDTELIRGRTAGPPA------- MMAR_5070|M.marinum_M SGLPVVELLDTELIRGRTAGPPA------- Mb3606c|M.bovis_AF2122/97 SGLPVIEVLDTELVRGRTAGPPA------- Rv3575c|M.tuberculosis_H37Rv SGLPVIEVLDTELVRGRTAGPPA------- MAV_0585|M.avium_104 SGLPVVELLDTELIRGRTAGPPA------- MAB_2023c|M.abscessus_ATCC_199 ASANDRRTHQARLKIAGVSSPPAIRRAMSD :. ::.: . .:.***