For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MLIRRIARPMLSAAFIGQGVESLLNPKPAAQAAAPAVAGLRTLPEPMGSRVPADPETVAQINAAVQIGGG LLLATGRLPRLASAALALTVVPGNLGAHMFWNEPDPDRKAQKRREFLTDVSLLGGLIIASADTAGKPSLA WRGRRAAEKLSGAVSSALPGSDDMRLESELGDKIVHGIQAGAERGRELASTAAEKSAPYAEAALERGREL ASTAAEKGAPLAEAARRRGERLAHSARVRGAELAETARHQGTQLADTARARVEAPVRGRRH
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_2258 | - | - | 100% (271) | hypothetical protein MUL_2258 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3130 | - | 2e-80 | 58.65% (266) | DoxX family protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4785 | - | 5e-43 | 40.08% (257) | hypothetical protein MAB_4785 |
M. marinum M | MMAR_3017 | - | 1e-147 | 98.89% (271) | hypothetical protein MMAR_3017 |
M. avium 104 | MAV_2471 | - | 3e-99 | 74.10% (251) | DoxX subfamily protein, putative |
M. smegmatis MC2 155 | MSMEG_3255 | - | 3e-78 | 56.04% (273) | DoxX subfamily protein, putative |
M. thermoresistible (build 8) | TH_4441 | - | 1e-35 | 68.32% (101) | PUTATIVE putative conserved hypothetical protein |
M. vanbaalenii PYR-1 | Mvan_3403 | - | 2e-80 | 57.86% (280) | DoxX family protein |
CLUSTAL 2.0.9 multiple sequence alignment MUL_2258|M.ulcerans_Agy99 MLIRRIARPMLSAAFIGQGVESLLNPKPAAQAAAPAVAGLRTLPEPMGSR MMAR_3017|M.marinum_M MLIRRIARPMLSAAFIGQGVESLLNPKPAAQAAAPAVAGLRTLPEPMGSR MAV_2471|M.avium_104 ------------MAFIGQGVNSLLNPKSAAEAAAPAVDGLQALPDPVSGN Mflv_3130|M.gilvum_PYR-GCK MLIRRVARPMLSAVFISRGVDALRSPKPATDATRQTLEELSKLPDPVGTK Mvan_3403|M.vanbaalenii_PYR-1 MLIRRVARPMLSAVFISRGVEALRSPKPAADATRHTLEGLSKLPDPVGTN MSMEG_3255|M.smegmatis_MC2_155 ---------MLSATFIARGVDALRNPKPAADAARPTLGMMSSLPDPVGSK MAB_4785|M.abscessus_ATCC_1997 ---------MLGSIFIVAGADGLTRPSASVAATEPLVSSLLEHTPESARR TH_4441|M.thermoresistible__bu ---------MLSAVFIGRGVDAVRSPKPAADAARPTIEGLTKLPEPVGPR ** *.:.: *..:. *: : : . . . MUL_2258|M.ulcerans_Agy99 --VPADPETVAQINAAVQIGGGLLLATGRLPRLASAALALTVVPGNLGAH MMAR_3017|M.marinum_M --VPADPETVAQINAAVQIGGGLLLATGRLPRLASAALALTVVPGNLGAH MAV_2471|M.avium_104 --IPSDPETVAQITAAVQIGGGLLLATGKLPRVASAALALTVLPANLGAH Mflv_3130|M.gilvum_PYR-GCK VPVPSNAETVAKVTAAVQIGGGLLLATGKLPRFASAALALSVVPGSLGGH Mvan_3403|M.vanbaalenii_PYR-1 --VPSNAETVAKVAAAVQIGGGLLLATGRLPRVASAALALSVVPSSLGGH MSMEG_3255|M.smegmatis_MC2_155 --VPSDAETVAKINGAVQVVGGLLLASGKMPRLTAAALALSVVPGSLGSH MAB_4785|M.abscessus_ATCC_1997 -YLPSDPQTYVRIHGATQLAAGLALASGKLPRISAWVLAGTLVPATLTDQ TH_4441|M.thermoresistible__bu --VPTDAETVARINGMVQIAGGALLATGKLPRVASAVLALSVVPGSLGGH :*::.:* .:: . .*: .* **:*::**.:: .** :::*..* : MUL_2258|M.ulcerans_Agy99 MFWNEPDPDRKAQKRREFLTDVSLLGGLIIASADTAGKPSLAWRGRRAAE MMAR_3017|M.marinum_M MFWNEPDPDRKAQKRREFLTDVSLLGGLIIASADTAGKPSLAWRGRRAAE MAV_2471|M.avium_104 SFWNESDPVAKAQKRQQFLTDLSLLGGLLIASADTAGKPSLGWRGRRAAE Mflv_3130|M.gilvum_PYR-GCK SFWNEVDPQRKAEERRAFITDVSLIGGLIIAAVDTEGKPSLGWRGRRAAR Mvan_3403|M.vanbaalenii_PYR-1 AFWNEADPQRKADERRAFVTDISLIGGLIIAAVDTEGKPSLGWRGRRAAH MSMEG_3255|M.smegmatis_MC2_155 SFWKESDPQRSAQERREFLTDLSLIGGLIIAAADTEGKPSLAWRGRRAAH MAB_4785|M.abscessus_ATCC_1997 AYWRQTDPALKLQQKTHFWKNISILGGLIIAGIDTEGRPGLSWRARRAAR TH_4441|M.thermoresistible__bu MFWTESDPQRKAXXXTGGYPPAGFPPPGGFGASYRFG-DAFNWAWSAFTR :* : ** . .: :.. * .: * :. MUL_2258|M.ulcerans_Agy99 KLSGAVSSALP------------------GSDDMRLES---ELGDKIVHG MMAR_3017|M.marinum_M QLSGAVSSALP------------------GSDDVRLES---ELGDKIVHG MAV_2471|M.avium_104 RLSERVSSAWP------------------GSDDSGFEADLSELGERIAHG Mflv_3130|M.gilvum_PYR-GCK KVSETVAAALP------------------AGAAAGSSLTDSAFAEKVGHG Mvan_3403|M.vanbaalenii_PYR-1 KVSEAVAAALP------------------AGAAAGGSLADSEFVEKVEHG MSMEG_3255|M.smegmatis_MC2_155 KVTASVAAALP------------------AGAAASESIADSAVAEKLGHG MAB_4785|M.abscessus_ATCC_1997 DAVAAVTSALP------------------GVEQTSQSLG----AKTLELG TH_4441|M.thermoresistible__bu HAAPLMLAALAYVAIIFALSFLFSLVLTAFTPGGATTVDPDSFFDMFGVG : :* . . . * MUL_2258|M.ulcerans_Agy99 IQAGAER----------------GRELASTAAEKSAPYAEAALER----- MMAR_3017|M.marinum_M IQAGAER----------------GRELASTAAEKSAPYAEAALER----- MAV_2471|M.avium_104 LQIGAER----------------GRELASTAAERGAPYAEAALER----- Mflv_3130|M.gilvum_PYR-GCK LHVGAER----------------GRELAHVAGERGSELAEVARERGGKWA Mvan_3403|M.vanbaalenii_PYR-1 LQVGAER----------------GRELAHVARERGGELAHVARER----- MSMEG_3255|M.smegmatis_MC2_155 LSVGAER----------------GRELAEIARERAAELAHAAREH----- MAB_4785|M.abscessus_ATCC_1997 -EATRER----------------IPDLVEHARERGAEIAETAQRR----- TH_4441|M.thermoresistible__bu GTLTMVVGVILLLFVSGVITSAFLNGLLAIADGQQIELASFFRPRNVGSV * * : * : MUL_2258|M.ulcerans_Agy99 ------GRELASTAAEK-----------GAPLAEAARRRG---------- MMAR_3017|M.marinum_M ------GRELASTAAEK-----------GAPLAEAARRRG---------- MAV_2471|M.avium_104 ------GRELASTAAER-----------GAPYAEAALERGRELASTAAER Mflv_3130|M.gilvum_PYR-GCK EVAREHGGELAEIARERGAELAEVARDRSAVLAERARDRA---------- Mvan_3403|M.vanbaalenii_PYR-1 ------APVLAEAARER----AETARERAAVLAELARERG---------- MSMEG_3255|M.smegmatis_MC2_155 ------APELAEAARER----SAHLAERGAVLADVARERG---------- MAB_4785|M.abscessus_ATCC_1997 ------GSQFAETASRR-----------GSELAERLSERG---------- TH_4441|M.thermoresistible__bu VIATVIVGVLSYIGTALCVVPGLIVSLFAMFTTVAVVDRNLSPIDG---- :: . . : * MUL_2258|M.ulcerans_Agy99 -------------------------------------------------- MMAR_3017|M.marinum_M -------------------------------------------------- MAV_2471|M.avium_104 GRPLAKKARKRGEELADEAAERAAYLAQKARKRSEELAEEAAERGKPLAK Mflv_3130|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_3403|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_3255|M.smegmatis_MC2_155 -------------------------------------------------- MAB_4785|M.abscessus_ATCC_1997 -------------------------------------------------- TH_4441|M.thermoresistible__bu -------------------------------------------------- MUL_2258|M.ulcerans_Agy99 -----------------ERLAHSARVRGA-----------ELAETARHQG MMAR_3017|M.marinum_M -----------------ERLAHSARVRGA-----------ELAETARHQG MAV_2471|M.avium_104 KARKRSEKLAKKARKRSEKLAGTARVRGE-----------ELAETARQRG Mflv_3130|M.gilvum_PYR-GCK -----------------PELADVARDRGTEWAELAR----DRAELARERA Mvan_3403|M.vanbaalenii_PYR-1 -----------------PELAEAAR---------------ERAEAARERA MSMEG_3255|M.smegmatis_MC2_155 -----------------LEFADVAQKRGLEFADVARGRGAELAETAREAA MAB_4785|M.abscessus_ATCC_1997 -----------------SELASAAE-------------------KGRHQV TH_4441|M.thermoresistible__bu ---------------ILASVDVVKKNFGPAILVWLASGVLIFLGSLLCGV . . MUL_2258|M.ulcerans_Agy99 TQLADTARARVEA-------PVR-GRRH--- MMAR_3017|M.marinum_M THLADTARARVEA-------PVR-GRRH--- MAV_2471|M.avium_104 SLLADTARERVGG-------QVGTGRRKLSW Mflv_3130|M.gilvum_PYR-GCK AVLADTAGKEAKKVSKEAKKQAKKQQRRVR- Mvan_3403|M.vanbaalenii_PYR-1 AMLADTAGTEVK-----------KQKRRLR- MSMEG_3255|M.smegmatis_MC2_155 PELAETARAHGNVLANRTRKQLKQARRR--- MAB_4785|M.abscessus_ATCC_1997 EALAADPPPRVRR-------FVHAFIRR--- TH_4441|M.thermoresistible__bu GLLITGPLAGLLVVCTFRRLTGAPVAPQAV- * . :