For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SYVLTAPDLLASAATDVDGIAATLQVANSAAAALTSGLLAAAQDEVSAAIAKVFSAYGQEYQAAIAQASA FHTEFTRALAAAGAAYAQAEAANASLITAGVSDALTAITTPIQSLLGPAAIGTGGAGSAGALTAVSSTLM ADPVVALIMGGTSVPLPGPGYVSDINNNYIQPLFSGAIPQALFTPEQFWPVTPGLGNLTFNQSVAQGVTL LNDAINTQLALGNKVVAFGYSQSATIVNNEILALMAMGTGAPDPGDLSFIMVGAPNNPDGGLLARFPGFY IPFLDVSFNGATPAANPYPTSIFTAQYDGIAHAPQYRLNILSDINAIMGYFYVHGNYPDLMSGQAIQLPT SPGYTGNTDYYMYLTQDLPLVQPIRDIPYAGPPLADLIQPQLRVLVDLGYSDYGPGLSYADVPTPAGLLS VPNPFAVSYYLLKGSLQAPYGAAVEIGVEAGLLGPESFPDTYPWVPSLNPGLNFYLGQPSVTLLSLLSGG LGDIFHLIPPPVFP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_1034 | - | - | 100% (505) | PE family protein |
M. ulcerans Agy99 | MUL_0967 | - | 3e-85 | 41.54% (467) | PE family protein |
M. ulcerans Agy99 | MUL_2440 | - | 4e-66 | 37.45% (502) | PPE family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0165c | PE4 | 0.0 | 71.79% (507) | PE family protein |
M. gilvum PYR-GCK | Mflv_1918 | - | 3e-36 | 35.25% (295) | hypothetical protein Mflv_1918 |
M. tuberculosis H37Rv | Rv0160c | PE4 | 0.0 | 72.19% (507) | PE family protein |
M. leprae Br4923 | MLBr_01183 | - | 3e-12 | 36.78% (87) | hypothetical protein MLBr_01183 |
M. abscessus ATCC 19977 | MAB_4141 | - | 3e-29 | 36.80% (231) | PE/PPE family protein |
M. marinum M | MMAR_0384 | - | 0.0 | 99.60% (505) | PE family protein, PE4 |
M. avium 104 | MAV_1346 | - | 2e-15 | 33.73% (169) | PE family protein |
M. smegmatis MC2 155 | MSMEG_5455 | - | 4e-40 | 33.77% (308) | PE family protein |
M. thermoresistible (build 8) | TH_3724 | - | 9e-45 | 36.68% (319) | PUTATIVE putative PE-PPE, C-terminal domain protein |
M. vanbaalenii PYR-1 | Mvan_4726 | - | 8e-42 | 33.77% (379) | hypothetical protein Mvan_4726 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1918|M.gilvum_PYR-GCK MGKGDFGLKASEFTGRSSTRFADSVRRRPGGATYGLYRHDGLGVGTWAWV MSMEG_5455|M.smegmatis_MC2_155 MGRLLHSLSTAFLVFVAVVVLCVSTS------------------------ MUL_1034|M.ulcerans_Agy99 ---------MS-YVLTAPDLLASAAT------------------------ MMAR_0384|M.marinum_M ---------MS-YVLTAPDLLASAAT------------------------ Mb0165c|M.bovis_AF2122/97 ---------MS-HLVTAPDMLATAAA------------------------ Rv0160c|M.tuberculosis_H37Rv ---------MS-HLVTAPDMLATAAA------------------------ MLBr_01183|M.leprae_Br4923 ---------MPLFLNAEPQALTAAAN------------------------ MAV_1346|M.avium_104 ---------MS-FVTTRPEALLAVAS------------------------ TH_3724|M.thermoresistible__bu ------VVAVGALTWGGXGVASPAGQPE---------------------- Mvan_4726|M.vanbaalenii_PYR-1 MRRRLRSAAWGLLSLVIAVLFAWG-------------------------- MAB_4141|M.abscessus_ATCC_1997 -MAGQYSVPGKRHSLRRYVATITAVA------------------------ Mflv_1918|M.gilvum_PYR-GCK FARSSRSFPRSRRCWRYPRGVPTPVAVLVANTTALVMGGTFHPLTGPRDS MSMEG_5455|M.smegmatis_MC2_155 --------------------MPTAAHLLLNHPHALVIGGTGTPVP----P MUL_1034|M.ulcerans_Agy99 --------------------DVDGIAATLQVANSAAAALTSGLLAAAQDE MMAR_0384|M.marinum_M --------------------DVDGIAATLQVANSAAAAPTSGLLAAAQDE Mb0165c|M.bovis_AF2122/97 --------------------HVDEIASTLRAANAAAAGPTCNLLAAAGDE Rv0160c|M.tuberculosis_H37Rv --------------------HVDEIASTLRAANAAAAGPTCNLLAAAGDE MLBr_01183|M.leprae_Br4923 --------------------TLEGLSAATVASNAAAAQLTTEIAPPAADD MAV_1346|M.avium_104 --------------------MLEGLGSSMDAQNAAAAAPTTSIAPAAADE TH_3724|M.thermoresistible__bu --------------------RAAALRLTATADAIIMPGTKIGYIPSQDEF Mvan_4726|M.vanbaalenii_PYR-1 ---------------------SVVTSTSAGAGTALVMGGNGHPLSVPQDT MAB_4141|M.abscessus_ATCC_1997 --------------------ATCTVLAPLAMESRTIASTLASYVIGIGGN Mflv_1918|M.gilvum_PYR-GCK PEFVTAYLDNAVDNQISAAYGYAVTN---AVAVYTPEEFFPLGG-LTFDD MSMEG_5455|M.smegmatis_MC2_155 PEYVNGQTDNYIGAEFPGEYRYAVH---------TPQNFWPVYGSMSFDE MUL_1034|M.ulcerans_Agy99 VSAAIAKVFSAYGQEYQAAIAQASA----------------FHTEFTRAL MMAR_0384|M.marinum_M VSAAIAKVFSAYGQEYQAAIAQASA----------------FHTEFTRAL Mb0165c|M.bovis_AF2122/97 VSAATAALFSAYGREYQAVVKQAAA----------------FHSEFTRTL Rv0160c|M.tuberculosis_H37Rv VSAATAALFSAYGREYQAVVKQAAA----------------FHSEFTRTL MLBr_01183|M.leprae_Br4923 VSILLAHFFSGHGRQYQAHASQGAT----------------NHQDLIQSL MAV_1346|M.avium_104 VSALQAAQFSAYGTWYQQVSAQAKA----------------IHQTLVQNL TH_3724|M.thermoresistible__bu TAYATAVIGATAGAPGAVDYLGVPG----------EFWPATGLDSLTFDA Mvan_4726|M.vanbaalenii_PYR-1 PDYINKYVTAADDAFIAPSGLCGPQCSLVATYTPAQIRFVNGIFDMTYDE MAB_4141|M.abscessus_ATCC_1997 NDGASANIPRKLGGAYSVDYHPVSYPG--------AIWPVSGLTAPTFKT . Mflv_1918|M.gilvum_PYR-GCK SVAEGLANLGRCLRAEPGCVFNADPAVAARVGTVAPRHDDTFVVFGYSQS MSMEG_5455|M.smegmatis_MC2_155 STVAGLAALQAEMAKEG-------------------HFGSPLVILGYSSS MUL_1034|M.ulcerans_Agy99 AAAGAAYAQAEAANASLITAGVSDALTAITTPIQSLLGPAAIGTGGAGSA MMAR_0384|M.marinum_M AAAGAAYAQAEAANASLITAGVSDALTAITTPIQSLLGPAAIGTGGAGSA Mb0165c|M.bovis_AF2122/97 EAAGNAYAHAEAANA----ARVSHALDTINAPIRTLLGRTPLSPNGSSGA Rv0160c|M.tuberculosis_H37Rv EAAGNAYAHAEAANA----ARVSHALDTINAPIRTLLGRAPLSPNGSSGA MLBr_01183|M.leprae_Br4923 LTSSSAYAGTETAN------------------------------------ MAV_1346|M.avium_104 DTNADSYGATEAANR-------------VNTSAAALQGLAPNVIPNAAPA TH_3724|M.thermoresistible__bu SVAXGQAMLTPMVDG-------------------AIESDTPIVVFGHSQS Mvan_4726|M.vanbaalenii_PYR-1 SVAVGQANLNDCIQGSD----CTATLAPYSETGPHTVADSTYVIYAYSQS MAB_4141|M.abscessus_ATCC_1997 SVAQGRTNLNDEIVT---------------------AGNQPITIVGYSLG . Mflv_1918|M.gilvum_PYR-GCK AAVASLLKRQLIDAP--GPEPAATTFMLAANPMRPNGGVLGRFPALTIPI MSMEG_5455|M.smegmatis_MC2_155 TRILTADKNRRIAD---GDYAVDINYVLVSDVAKGNGGVMARFPGWHIPI MUL_1034|M.ulcerans_Agy99 GALTAVSSTLMADPV--VALIMGGTSVPLPGPGYVSDINNNYIQPLFSGA MMAR_0384|M.marinum_M GALTAVSSTLMADPV--VALIMGGTSVPLPGPGYVSDINNNYIQPLFSGA Mb0165c|M.bovis_AF2122/97 GGLPAIAQLAAESPI--TALIMGGTNNPLPDPEYVTDINKAFIQTLFPGA Rv0160c|M.tuberculosis_H37Rv GGLPAIAQLAAESPI--TALIMGGTNNPLPDPEYVTDINKAFIQTLFPGA MLBr_01183|M.leprae_Br4923 -------HDSL--------------------------------------- MAV_1346|M.avium_104 ADPPPAGTTSLGT-------------------------SIGWAQNVGAAA TH_3724|M.thermoresistible__bu AVIATKEKQRLLAEYPDPDTAPDVTFVMVANPNRPNGGLLARFPGLYIPI Mvan_4726|M.vanbaalenii_PYR-1 ATVAANQKLQLIAHP----VASTVSFLLVANPNRPDGGILERFVGAYIPL MAB_4141|M.abscessus_ATCC_1997 AVVVSKSHSDLLQRYP--GGNPNIQFVLMGSANTPNGGIFARFPWLKIPL Mflv_1918|M.gilvum_PYR-GCK LGITFHGATPTAGVDG-AYRTVDVVRQYDGLGGDFPVRPLNLLATVNALL MSMEG_5455|M.smegmatis_MC2_155 LGVTFDGATRTDSDGY-AFDTKSISFVHDGWS-DFPVYPLNVLALANAVA MUL_1034|M.ulcerans_Agy99 IPQALFTPEQFWPVTP-GLGNLTFNQSVAQGVTLLNDAINTQLALGNKVV MMAR_0384|M.marinum_M IPQALFTPEQFWPVTP-GLGNLTFNQSVAQGVTLLNDAINTQLALGNKVV Mb0165c|M.bovis_AF2122/97 VSQGLFTPEQFWPVTP-DLGNLTFNQSVTEGVALLNTTVNNQLALDNKVV Rv0160c|M.tuberculosis_H37Rv VSQGLFTPEQFWPVTP-DLGNLTFNQSVTEGVALLNTAVNNQLALDNKVV MLBr_01183|M.leprae_Br4923 -------------------------------------------------- MAV_1346|M.avium_104 SDFITLGEGQFAPVPG-AAGIPNFNPGLTAATTAGPPAPAAPAAAAGAPV TH_3724|M.thermoresistible__bu LGVTFNGATP-APADG-PFDSYDVAREFDGWA-DFPRYPLNLVATANAIL Mvan_4726|M.vanbaalenii_PYR-1 LGITFNGSTPTFSPQPRPLTTVDVARQYDGWA-DFPTNPLNLLADLNAIM MAB_4141|M.abscessus_ATCC_1997 ADIESNGAWE-----PDQFKTKVINTEYDTYG-DFPAY-FNPLALANSIA Mflv_1918|M.gilvum_PYR-GCK GYGIMH-GETVDVPF--------AQARFQGREGDTDYYLIGTDLLPLLQP MSMEG_5455|M.smegmatis_MC2_155 GIAVLH-PTYPELDR--------PDLVPVGSTGDTEYFVIGTDIMPLLMP MUL_1034|M.ulcerans_Agy99 AFGYSQ-SATIVNNE--------ILALMAMGTGAPDPGDLSFIMVGAPNN MMAR_0384|M.marinum_M AFGYSQ-SATIVNNE--------ILALMAMGTGAPDPGDLSFIMVGAPNN Mb0165c|M.bovis_AF2122/97 AFGYSQ-SATIINNY--------INSLMAMGS--PNPDDISFVMIGSGNN Rv0160c|M.tuberculosis_H37Rv AFGYSQ-SATIINNY--------INSLMAMGS--PNPDDISFVMIGSGNN MLBr_01183|M.leprae_Br4923 -------------------------------------------------- MAV_1346|M.avium_104 LASMGR-GPSIGGLS--------VPPSWAPGGVAPAANATPAQLVG---- TH_3724|M.thermoresistible__bu GIYYLH-GGYYELLTENPDILDDPERTIVQQYGDTTYYLIRTEQLPLLRP Mvan_4726|M.vanbaalenii_PYR-1 GTILLH-PNYSDAGT----------PQLQGQYQDSTYYLIPAPITPVLVP MAB_4141|M.abscessus_ATCC_1997 AIQYAHPDAYYDRIDPAALDDPDNPNVVKTVQGNTTYYLVRAEHLPLLQP Mflv_1918|M.gilvum_PYR-GCK LLLF-VP---RPILSALDAPLRVLVEDAYDRDAGPGDPTTARWWPVKDFA MSMEG_5455|M.smegmatis_MC2_155 LETIGVP---RPILLAVDEPLRVLVEAGYRRDIAPGAPTPARLIPIVNPI MUL_1034|M.ulcerans_Agy99 PDGGLLA---RFPGFYIPFLDVSFNGATPAANPYPTSIFTAQYDGIAHAP MMAR_0384|M.marinum_M PDGGLLA---RFPGFYIPFLDVSFNGATPAANPYPTSIFTAQYDGIAHAP Mb0165c|M.bovis_AF2122/97 PVGGLLA---RFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAP Rv0160c|M.tuberculosis_H37Rv PVGGLLA---RFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAP MLBr_01183|M.leprae_Br4923 -------------------------------------------------- MAV_1346|M.avium_104 ------------AGFTSAAPDTAPVTAVPGGVPSMATAGRGGYG--LGAP TH_3724|M.thermoresistible__bu LRDLGVP---EEFVDALEPYVRRIVDLGYDRNTPYGEPAPVRVLPPLTPA Mvan_4726|M.vanbaalenii_PYR-1 LTWVPIVG--KPLAIALDPAVRVLVEMGYDRTVNPGQPTPARYLYVPNLI MAB_4141|M.abscessus_ATCC_1997 LRDLTNPIGASFVLDAIEPTLRVFIDMAYDRDTGPGTTTQFSFFTPSKNI Mflv_1918|M.gilvum_PYR-GCK GTAAKLIASVPV----AVDNLTEGFGLGRVLGTPVPGVFGVGG------- MSMEG_5455|M.smegmatis_MC2_155 TLTRNFIAAIPV----GVDDAMEELGHGRPLGTQPSGVFGVGGEDTELKG MUL_1034|M.ulcerans_Agy99 QYRLNILSDINA----IMGYFYVHGNYPDLMS---GQAIQLPTSPGYTGN MMAR_0384|M.marinum_M QYPLNILSDINA----IMGYFYVHGNYPDLMS---GQAIQLPTSPGYTGN Mb0165c|M.bovis_AF2122/97 QFPLRILSDINA----FMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGN Rv0160c|M.tuberculosis_H37Rv QFPLRILSDINA----FMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGN MLBr_01183|M.leprae_Br4923 -------------------------------------------------- MAV_1346|M.avium_104 RYGVKPTVMPKP----AI-------------------------------- TH_3724|M.thermoresistible__bu PGPATQHNAG---------------------------------------- Mvan_4726|M.vanbaalenii_PYR-1 KAALNFAMAIPTGWDDAISYLTGDPDCRPFHTTVPASPFGVGGPPVYTGA MAB_4141|M.abscessus_ATCC_1997 VDAFNKLPTAIAEGAHNVENGLAGATPKQSASPEKPASPPVPQPGPTNPG Mflv_1918|M.gilvum_PYR-GCK ----------PDLPDVDEGGAVTSDIDEDAVAQRDSASSTERSAPAEESR MSMEG_5455|M.smegmatis_MC2_155 LPAGVISLAKPTLPVSSHTTVVEKTERKDLAKPAAEPEPVVEDEPAVEDE MUL_1034|M.ulcerans_Agy99 TDYYMYLTQDLPLVQPIRDIPYAGPPLADLIQPQLRVLVDLGYSDYGPGL MMAR_0384|M.marinum_M TDYYMYLTQDLPLVQPIRDIPYAGPPLADLIQPQLRVLVDLGYSDYGPGL Mb0165c|M.bovis_AF2122/97 TQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGG Rv0160c|M.tuberculosis_H37Rv TQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGG MLBr_01183|M.leprae_Br4923 -------------------------------------------------- MAV_1346|M.avium_104 -------------------------------------------------- TH_3724|M.thermoresistible__bu -----------------QGITVASATSTPDKRTPVVEAPVEEPPVQTGRS Mvan_4726|M.vanbaalenii_PYR-1 IDPYGEPTPYLAPPVETHGEAAPGSGSPAAHPAGTEPPETVTFSPTTEST MAB_4141|M.abscessus_ATCC_1997 SATTQIPAPEAPTPSVVSLSTAEPPAPPASAKAADPTAISVSTAGASTAR Mflv_1918|M.gilvum_PYR-GCK SAVGGADSDGRDDVVDPEPAAPEAETSE-----------AETVTETEADD MSMEG_5455|M.smegmatis_MC2_155 TPVADTKKASPKPLRPKVRGPISFDAPK-----------LPTIRKATGDR MUL_1034|M.ulcerans_Agy99 SYADVPTPAGLLSVPNPFAVSYYLLKGS-----------LQAPYGAAVEI MMAR_0384|M.marinum_M SYADVPTPAGLLSVPNPFAVSYYLLKGS-----------LQAPYGAAVEI Mb0165c|M.bovis_AF2122/97 NYADIPTPAGLFSIPNPFAVTYYLIKGS-----------LQAPYGAIVEI Rv0160c|M.tuberculosis_H37Rv NYADIPTPAGLFSIPNPFAVTYYLIKGS-----------LQAPYGAIVEI MLBr_01183|M.leprae_Br4923 -------------------------------------------------- MAV_1346|M.avium_104 -------------------------------------------------- TH_3724|M.thermoresistible__bu TLKREKPVSARHLVRNSLRAVPGLRRGE-----------PAATP------ Mvan_4726|M.vanbaalenii_PYR-1 PSTLLPETPAESEDMPPDFVENDTPDSD-----------EVSPTEDDALK MAB_4141|M.abscessus_ATCC_1997 DQDFQPDTKPDPKSTPPPTKDSVGEADKSKNTLKPTLRLPKLPVAQPGTA Mflv_1918|M.gilvum_PYR-GCK ---------ADDADDGADADDEDIDADGADADGEDTAGNTAEAA------ MSMEG_5455|M.smegmatis_MC2_155 PLKRLLSALTPKRPKPASSHDAGPAAGNKDTDNADKPAARADDAA----- MUL_1034|M.ulcerans_Agy99 GVEAGLLGPESFPDTYPWVPSLNPGLNFYLGQPSVTLLSLLSGGLGDIFH MMAR_0384|M.marinum_M GVEAGLLGPESFPDTYPWVPSLNPGLNFYLGQPSVTLLSLLSGGLGDIFH Mb0165c|M.bovis_AF2122/97 GVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGGLGNILH Rv0160c|M.tuberculosis_H37Rv GVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGGLGNILH MLBr_01183|M.leprae_Br4923 -------------------------------------------------- MAV_1346|M.avium_104 -------------------------------------------------- TH_3724|M.thermoresistible__bu -------TPDVTPDVTPDAPAGQPEPAEPNESAAPPAAAEADDASE---- Mvan_4726|M.vanbaalenii_PYR-1 DTETINESQDGPTESASGVSGEDAADADSRSADADSLSADAGDSAPADAA MAB_4141|M.abscessus_ATCC_1997 PKSPKFPSLKNHLKSVPGLSEKKNPAADASSKHSQPANAPAHTSDKTSDH Mflv_1918|M.gilvum_PYR-GCK --------- MSMEG_5455|M.smegmatis_MC2_155 --------- MUL_1034|M.ulcerans_Agy99 LIPPPVFP- MMAR_0384|M.marinum_M LIPPPVFP- Mb0165c|M.bovis_AF2122/97 LIPPPVFT- Rv0160c|M.tuberculosis_H37Rv LIPPPVFT- MLBr_01183|M.leprae_Br4923 --------- MAV_1346|M.avium_104 --------- TH_3724|M.thermoresistible__bu --------- Mvan_4726|M.vanbaalenii_PYR-1 AADTAA--- MAB_4141|M.abscessus_ATCC_1997 ASETGRGAA