For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RMVVMGTGYLGATHAACMAELGHEVLGVDIDPAKLAKLEAGEVPFFEPGLSEVLRRHTSSGRLRFSSSYQ EAAEFADVFFVAVATPQKKGDYGADLCFVDAVIDNLAPLLDKPSLIIGKSTVPVGTATRLGRCVRDLAPA GDAVELVWNPEFLREGFAVQGTLHPDRLVLGVERPGSGRAEGIVREIYADLINDGVPFIVTDLATAELVK VSANAFLATKISFINAIAEVCEAVDADVTVLADAIGYDSRIGRRFLNAGLGFGGGCLPKDIRAFMARAGE LGANQALTFLREVDSINMRRRTRVVEIAREICGGGFIGSRVAVLGAAFKPDSDDVRDSPALNVAGQIQLQ GACVNVFDPQAMDNSRTLFPTLNYATSAFEACDGADVVLVLTEWEEFRSIDPAELKTTVRSAAVIDGRNC LDAAAWCAAGWYYRALGRPAAPRGANASVVTK*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5982 | - | - | 100% (453) | UDP-glucose 6-dehydrogenase |
M. smegmatis MC2 155 | MSMEG_0680 | - | e-179 | 71.95% (435) | UDP-glucose 6-dehydrogenase |
M. smegmatis MC2 155 | MSMEG_5957 | algD | 2e-41 | 30.30% (439) | GDP-mannose 6-dehydrogenase AlgD |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0330 | udgA | 1e-171 | 67.95% (440) | UDP-glucose 6-dehydrogenase UdgA |
M. gilvum PYR-GCK | Mflv_0289 | - | 0.0 | 71.98% (439) | UDP-glucose 6-dehydrogenase |
M. tuberculosis H37Rv | Rv0322 | udgA | 1e-171 | 67.95% (440) | UDP-glucose 6-dehydrogenase UdgA |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4295c | - | 0.0 | 71.53% (439) | UDP-glucose 6-dehydrogenase (UdgA) |
M. marinum M | MMAR_0603 | udgA | 1e-173 | 68.49% (438) | UDP-glucose dehydrogenase UdgA |
M. avium 104 | MAV_4823 | - | 1e-173 | 68.81% (436) | UDP-glucose 6-dehydrogenase |
M. thermoresistible (build 8) | TH_0768 | udgA | 1e-170 | 66.97% (439) | PROBABLE UDP-GLUCOSE 6-DEHYDROGENASE UDGA (UDP-GLC |
M. ulcerans Agy99 | MUL_1511 | - | 5e-16 | 24.65% (361) | UDP-glucose 6-dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_0598 | - | 0.0 | 72.67% (439) | UDP-glucose 6-dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0289|M.gilvum_PYR-GCK -------MRCTVFGTGYLGATHAAGMAELGHEVVGVDIDPGKVAKLAAGE Mvan_0598|M.vanbaalenii_PYR-1 -------MRCTVFGTGYLGATHAAGMAELGHDVLGVDIDAGKVAKLSGGE TH_0768|M.thermoresistible__bu -------MRCTVFGAGYLGTTHAAGMAALGHEVIAVDVDAGKVAKLAAGE Mb0330|M.bovis_AF2122/97 -------MRCSVFGTGYLGATHAVGMAQLGHEVVGVDIDPGKVAKLAGGD Rv0322|M.tuberculosis_H37Rv -------MRCSVFGTGYLGATHAVGMAQLGHEVVGVDIDPGKVAKLAGGD MMAR_0603|M.marinum_M -------MRCTVFGTGYLGATHAVGMAQLGHEVVGVDIDPGKVAKLAGGD MAV_4823|M.avium_104 -----------MFGTGYLGATHAVGMAELGHDVLGVDIDPGKVAKLAGGD MAB_4295c|M.abscessus_ATCC_199 -------MRCTVFGTGYLGATHAACMAELGHEVLGVDIDPGKVAKLSSGD MSMEG_5982|M.smegmatis_MC2_155 -------MRMVVMGTGYLGATHAACMAELGHEVLGVDIDPAKLAKLEAGE MUL_1511|M.ulcerans_Agy99 MTTQPSERICIVGGAGHVGLPLALVLADEGYNVDILDTNAEALETIMAGR : *:*::* . * :* *::* :* :. : .: .* Mflv_0289|M.gilvum_PYR-GCK VPFYEPGLREALQRNIEAGRLRFTTDYAEAAEFADVHFLGVGTPQKKGEY Mvan_0598|M.vanbaalenii_PYR-1 VPFYEPGLREMLRRNIDAGRLRFTTDYAEAAGFADVHFLGVGTPQKKGEY TH_0768|M.thermoresistible__bu VPFYEPGLRALVTENLATGRLQFTTDYDAAADFADLHFLGVGTPQQRGDY Mb0330|M.bovis_AF2122/97 IPFYEPGLRKLLTDNLAAGRLRFTTDYDMAADFADVHFLGVGTPQKIGEY Rv0322|M.tuberculosis_H37Rv IPFYEPGLRKLLTDNLAAGRLRFTTDYDMAADFADVHFLGVGTPQKIGEY MMAR_0603|M.marinum_M IPFYEPGLRKLLRDNLAAGRLHFTTDYDMAAEFADVHFLGVGTPQKRGEY MAV_4823|M.avium_104 IPFYEPGLRKLLNENLAAGRLRFTTDYDMAAGFADVHFLGVGTPQKKGEY MAB_4295c|M.abscessus_ATCC_199 IPFYEPGLRKILQSNIASGRLRFTTSYAEAAEFADVHFLGVGTPQKKGEY MSMEG_5982|M.smegmatis_MC2_155 VPFFEPGLSEVLRRHTSSGRLRFSSSYQEAAEFADVFFVAVATPQKKGDY MUL_1511|M.ulcerans_Agy99 MPFIETGAEDLLKPLLPTGRISGSTDSQVVRN-SDIVICVVGTP-VDEYL :** *.* : :**: ::. . :*: : *.** Mflv_0289|M.gilvum_PYR-GCK AADLRHVYAVIDTLVPLLRRPAVIVGKSTVPVGTAAELVERAAGLAPDGV Mvan_0598|M.vanbaalenii_PYR-1 GADLRHVYAVIDTLVPLLTRPAVIVGKSTVPVGTAADLSERAAGLAPEGV TH_0768|M.thermoresistible__bu SADLTQVHAVVDTLVPRLRRPAVIVGKSTVPVGTARDLLERARRLAPTGV Mb0330|M.bovis_AF2122/97 GADLRHVHAVIDALVPRLVRASILVGKSTVPVGTAAELGHRAGALAPRGV Rv0322|M.tuberculosis_H37Rv GADLRHVHAVIDALVPRLVRASILVGKSTVPVGTAAELGHRAGALAPRGV MMAR_0603|M.marinum_M GADLRHIHAVIDTLVPRLTRTSVLIGKSTVPVGTAAELARRAAGLAVAGV MAV_4823|M.avium_104 GADLRHVYAVIDELVPRLTTSAVLVGKSTVPVGTAAELNQRAAALAPRGV MAB_4295c|M.abscessus_ATCC_199 GADLRHVHSVIDTLVPLLSRSAVIIGKSTVPVGTARELGQRAAGFAAAGV MSMEG_5982|M.smegmatis_MC2_155 GADLCFVDAVIDNLAPLLDKPSLIIGKSTVPVGTATRLGRCVRDLAPAGD MUL_1511|M.ulcerans_Agy99 TPQAHTFFRVIDEISPYFHDGQTLILRSTVYPGLSQRVHD---MFSERGI .: . *:* : * : :: :*** * : : :: * Mflv_0289|M.gilvum_PYR-GCK TVEVAWNPEFLREGFAVQDTLHPDRIVLGVQK-DSRIAEPVLRELYAALL Mvan_0598|M.vanbaalenii_PYR-1 TVEVAWNPEFLREGFAVADTLHPDRIVLGVQR-DSQLAEPVLREMYAPLL TH_0768|M.thermoresistible__bu DVEVAWNPEFLREGFAVRDTLHPDRIVVGAPP-DSVRAEPMLRELYAPLL Mb0330|M.bovis_AF2122/97 DVEIAWNPEFLREGFAVHDTLNPDRIVLGVQD-DSTRAEVAVRELYAPLL Rv0322|M.tuberculosis_H37Rv DVEIAWNPEFLREGFAVHDTLNPDRIVLGVQD-DSTRAEVAVRELYAPLL MMAR_0603|M.marinum_M GVEIAWNPEFLREGFAVRDTLRPDRIVLGVQE-DSILAEQFVRELYGPLL MAV_4823|M.avium_104 NVEIAWNPEFLREGYAVQDTLRPDRIVLGIKQ-DSPRAEAAVRELYGPLL MAB_4295c|M.abscessus_ATCC_199 DVEVAWNPEFLREGYAVKDTLHPDRIVLGVQR-DSDRAEKLVRELYGPIL MSMEG_5982|M.smegmatis_MC2_155 AVELVWNPEFLREGFAVQGTLHPDRLVLGVERPGSGRAEGIVREIYADLI MUL_1511|M.ulcerans_Agy99 GVHVTFCPERIAQGHSIRELRIIPQIISGFDA----EGLRVVRELFSGIA *.:.: ** : :*.:: ::: * . :**::. : Mflv_0289|M.gilvum_PYR-GCK ADGAPFLVSDLQTAELAKVSANAFLATKISFINAISEVCEAVGADVTLLA Mvan_0598|M.vanbaalenii_PYR-1 AAGVPFLIADLQTAELVKVSANAFLATKISFINAISEVCEAVDADVTLLA TH_0768|M.thermoresistible__bu GDGVPWLSTDLQTAELVKVSANAFLATKISFINAISDVCEAVGADVVTLA Mb0330|M.bovis_AF2122/97 AAGVPFLVTDLQTAELVKVSANAFLATKISFINAISEVCEAAGADVSQLA Rv0322|M.tuberculosis_H37Rv AAGVPFLVTDLQTAELVKVSANAFLATKISFINAISEVCEAAGADVSQLA MMAR_0603|M.marinum_M EAGVPFLVTDLQTAELVKVSANAFLATKISFINAISEVCEAAGADVSLLA MAV_4823|M.avium_104 DAGVPFLVTDLQTAELVKVSANAFLATKISFINAISEVCEAAGADVSLLA MAB_4295c|M.abscessus_ATCC_199 DEEVPFLVTDLETAELVKVSANAFLATKISFINAISEVCEAVGADVTTLA MSMEG_5982|M.smegmatis_MC2_155 NDGVPFIVTDLATAELVKVSANAFLATKISFINAIAEVCEAVDADVTVLA MUL_1511|M.ulcerans_Agy99 SE---IIKVEPQEAELAKLFCNSYRYIQFAVANQFYLLSREAGQDFDRVH : : ***.*: .*:: :::. * : :.. .. *. : Mflv_0289|M.gilvum_PYR-GCK DALGHDARIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGANQALTFLRE Mvan_0598|M.vanbaalenii_PYR-1 DALGHDARIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGANHALTFLRE TH_0768|M.thermoresistible__bu DALGHDPRIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGANHTLTLLRE Mb0330|M.bovis_AF2122/97 DALGYDPRIGRQCLNAGLGFGGGCLPKDIRAFMARAGELGADQALTFLRE Rv0322|M.tuberculosis_H37Rv DALGYDPRIGRQCLNAGLGFGGGCLPKDIRAFMARAGELGADQALTFLRE MMAR_0603|M.marinum_M DALGYDTRIGRQCLNAGLGFGGGCLPKDIRAFMARAGELGANQALTFLRE MAV_4823|M.avium_104 DALGYDPRIGRQFLNAGLGFGGGCLPKDIRAFMARAGELGADQALTFLRE MAB_4295c|M.abscessus_ATCC_199 DALGYDPRIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGASHALTFLRE MSMEG_5982|M.smegmatis_MC2_155 DAIGYDSRIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGANQALTFLRE MUL_1511|M.ulcerans_Agy99 HATTYKNSRVDSLPRAGLAAG-PCLLKDTMQLAAFS-----NNNFMLGHS .* :. .***. * ** ** : * : .: : : :. Mflv_0289|M.gilvum_PYR-GCK VDSINMRRRTRMVELATTACGGSLLGANIAVLGAAFKPESDDVRDSPALN Mvan_0598|M.vanbaalenii_PYR-1 VDSINMRRRTRMVELATKACGGSLLGANVAVLGAAFKPESDDVRDSPALN TH_0768|M.thermoresistible__bu VDSINMRRRARMVELATTACGGSLLGANIAVLGAAFKPDSDDVRDSPALN Mb0330|M.bovis_AF2122/97 VDSINMRRRTKMVELATTACGGSLLGANIAVLGAAFKPESDDVRDSPALN Rv0322|M.tuberculosis_H37Rv VDSINMRRRTKMVELATTACGGSLLGANIAVLGAAFKPESDDVRDSPALN MMAR_0603|M.marinum_M VDSINMRRRTRMVELATTACGGSLLGANLAVLGAAFKPESDDVRDSPALN MAV_4823|M.avium_104 VDSINMRRRTRMVELASAACGGSLLGANVAVLGAAFKPESDDVRDSPALN MAB_4295c|M.abscessus_ATCC_199 VDSINMRRRTRMVELATKACGGSLLGANVAVLGAAFKPESDDVRDSPALN MSMEG_5982|M.smegmatis_MC2_155 VDSINMRRRTRVVEIAREICGGGFIGSRVAVLGAAFKPDSDDVRDSPALN MUL_1511|M.ulcerans_Agy99 AMLINEGQPQFIVNMLKRRVN--LRDKTVGILGMTFKADCDDTRDSLSFK . ** : :*:: . : . :.:** :**.:.**.*** ::: Mflv_0289|M.gilvum_PYR-GCK VAGMLQLHGATVNVYDPKAMDNSRRLFPTLNYSASALDACERADAVLVLT Mvan_0598|M.vanbaalenii_PYR-1 VAGMLQLNGATVNVYDPQAIENSRRLFPTLNYATTVVEACDRADAVLVLT TH_0768|M.thermoresistible__bu VAGMLQLNGATVTVYDPKAMENSRRVFPTLTYSTSVAEACDRADAVLVLT Mb0330|M.bovis_AF2122/97 VAGQLQLNGATVHVYDPKALDNAHRLFPTLNYAVSVAEACERADAVLVLT Rv0322|M.tuberculosis_H37Rv VAGQLQLNGATVHVYDPKALDNAHRLFPTLNYAVSVAEACERADAVLVLT MMAR_0603|M.marinum_M VAGQLQLNGAAVNVYDPKALDNANRLFPTLNYAVSVAEACERADAVLILT MAV_4823|M.avium_104 VAGQLQLNGAAVNVYDPKALDNAQRLFPTLNYAVSVEEACERADAVLVLT MAB_4295c|M.abscessus_ATCC_199 VAGLLQLNGAAVNVYDPKALENSRRLFPTLNYATSVLEAADRADAVLLLT MSMEG_5982|M.smegmatis_MC2_155 VAGQIQLQGACVNVFDPQAMDNSRTLFPTLNYATSAFEACDGADVVLVLT MUL_1511|M.ulcerans_Agy99 LRHLLMLEAKEVILHDPFLEGKDYHPLQTV---------VDRSDVIVVGV : : *.. * :.** : : *: : :*.::: . Mflv_0289|M.gilvum_PYR-GCK EWSEFVGMHPDELSAAVRTKVIVDGRNCLDIGVWRDAGWQVHALGRTVEV Mvan_0598|M.vanbaalenii_PYR-1 EWREFVELDPVLLADTVRAKVVVDGRNCLDVGRWQQAGWQVFALGRFGGE TH_0768|M.thermoresistible__bu EWQEFIDLNPAELADIVRAKVIVDGRNCLDVRRWQRAGWKVFCLGRTP-- Mb0330|M.bovis_AF2122/97 EWREFIDLEPADLANRVRARVIVDGRNCLDVTRWRRAGWRVFRLG--VPR Rv0322|M.tuberculosis_H37Rv EWREFIDLEPADLANRVRARVIVDGRNCLDVTRWRRAGWRVFRLG--VPR MMAR_0603|M.marinum_M EWQEFVDLDPDDLADRVRARVIVDGRNCLDVSRWERAGWRVFRLG--ARI MAV_4823|M.avium_104 EWRQFVEMDPDDLADRVRARVVVDGRNCLDVTRWQRAGWRVYRLG--APR MAB_4295c|M.abscessus_ATCC_199 EWQEFVDFDPDALAKVVRTKVIVDGRNCLDAAKWVNAGWRVFCLGKRVEE MSMEG_5982|M.smegmatis_MC2_155 EWEEFRSIDPAELKTTVRSAAVIDGRNCLDAAAWCAAGWYYRALGRPAAP MUL_1511|M.ulcerans_Agy99 PHSAYRGLR------VPRGKVVEDVWGCLDVTEFDVDPCNGANLAELGTA : : * .: * .*** : *. Mflv_0289|M.gilvum_PYR-GCK GA-------- Mvan_0598|M.vanbaalenii_PYR-1 PAAA------ TH_0768|M.thermoresistible__bu ---------- Mb0330|M.bovis_AF2122/97 LGH------- Rv0322|M.tuberculosis_H37Rv LGH------- MMAR_0603|M.marinum_M RAAS------ MAV_4823|M.avium_104 P--------- MAB_4295c|M.abscessus_ATCC_199 LAHT------ MSMEG_5982|M.smegmatis_MC2_155 RGANASVVTK MUL_1511|M.ulcerans_Agy99 AAR-------