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M. smegmatis MC2 155 MSMEG_5728 (-)

MSYPRDMVGYGRTPPDPQWPGGAAIAVQFVLNYEEGAENCVLDGDPASETFLSEMTPAEAFPNRHMSMES
LYEYGSRAGLWRVLRVFEQRGIPLTIFAVARAMQRNPEAVAAFTELGHEIACHGLRWKSYQLTDRDTERE
HMAEAVRILKELTGSAPLGWYTGRDSPYTRELVVEHGGFVYDSDSYADDLPYWVQVDGSDHLVVPYTLDT
NDMRFASPAGFANGEEFFAHLRDAFDVLYAEGLAGAPKMLSVGLHCRLVGRPARTAALQRFLDHVQSHDK
VWLARRIEIAEHWRTVHPA

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_5728	-	-	100% (299)	polysaccharide deacetylase family protein
M. smegmatis MC2 155	MSMEG_4373	-	1e-23	30.34% (290)	polysaccharide deacetylase, putative
M. smegmatis MC2 155	MSMEG_3412	-	6e-23	30.96% (281)	polysaccharide deacetylase family protein

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	Mflv_0796	-	2e-15	26.84% (272)	polysaccharide deacetylase
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. abscessus ATCC 19977	MAB_2935c	-	1e-148	81.67% (300)	polysaccharide deacetylase family protein
M. marinum M	MMAR_1211	-	1e-155	85.86% (297)	chitinase
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	MUL_2681	-	1e-154	85.52% (297)	chitinase
M. vanbaalenii PYR-1	Mvan_0934	-	1e-165	90.30% (299)	polysaccharide deacetylase

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_5728|M.smegmatis_MC2_155      MS-----------YPRDMVGYGRTPPDPQWPGGAAIAVQFVLNYEEGAEN
Mvan_0934|M.vanbaalenii_PYR-1       MN-----------YPRDMVGYGRTPPDPQWPGGAAIAVQFVLNYEEGAEN
MMAR_1211|M.marinum_M               MTG----------YPRDMTGYGRTPPDPQWPGGALIAVQFVLNYEEGAES
MUL_2681|M.ulcerans_Agy99           MTG----------YPRDMTGYGRTPPDPQWRGGALIAVQFVLNYEEGAES
MAB_2935c|M.abscessus_ATCC_199      MAHNEAHDEAPPATPRDMVGYGRTPPHPRWPGNARIAVQFVLNYEEGAEN
Mflv_0796|M.gilvum_PYR-GCK          -----------------MDAFR-------WPDGKTAAAAFTFDVDA--ES
                                                     * .:        * ..   *. *.:: :   *.

MSMEG_5728|M.smegmatis_MC2_155      CVLDGDPASETFLSEMTPAEAFPNRHMSMESLYEYGSRAGLWRVLRVFEQ
Mvan_0934|M.vanbaalenii_PYR-1       CVLDGDPASETFLSEITPAEAFPNRHMSMESLYEYGSRAGLWRVLRVFER
MMAR_1211|M.marinum_M               SVLDGDSGSETFLSEIVPAQSFPNRHMSMESLYEYGSRAGVWRVLRVCEQ
MUL_2681|M.ulcerans_Agy99           SVLDGDSGSETFLSEIVPAQSFPNRHMSMESLYEYGSRAGVWRVLRVCEQ
MAB_2935c|M.abscessus_ATCC_199      NVLDGSAGSETFLSEMVPVEAFPNRHMSMESLYEYGSRAGLWRVLRVFER
Mflv_0796|M.gilvum_PYR-GCK          AVLWGDES--------------VGARMSVMSHQAYGPLVGIPRILDLLEQ
                                     ** *. .               . :**: *   **. .*: *:* : *:

MSMEG_5728|M.smegmatis_MC2_155      RGIPLTIFAVARAMQRNPEAVAAFTELGHEIACHGLRWKSYQLTDRDTER
Mvan_0934|M.vanbaalenii_PYR-1       HDIPLTVFAVARALQRNPEAVAAFTELGHEIACHGLRWKSYQLTDRDTER
MMAR_1211|M.marinum_M               SGVPLTIFAVAQAMQRNPEVAKVFRELGHEIACHGLRWKSYQEIDRDTER
MUL_2681|M.ulcerans_Agy99           SGVPLTIFAVAQAMQRNPEVAKGFRELGHEIACHGLRWKSYQEIDRDTER
MAB_2935c|M.abscessus_ATCC_199      RGLPLTIFAVATALQRNPEAVSAFGELGHEIACHGLRWQSYQLVPPDIER
Mflv_0796|M.gilvum_PYR-GCK          HQITSTFFVPGHTADRYPEAVRSIVGAGHEIAHHGYLHEQPTALTLEEEI
                                      :. *.*. . : :* **..  :   ***** **   :.      : * 

MSMEG_5728|M.smegmatis_MC2_155      EHMAEAVRILKELTGSAPLGWYT-GRDSPYTRELVVEHGGFVYDSDSYAD
Mvan_0934|M.vanbaalenii_PYR-1       VHLAEAVQILQDLTGSTPSGWYT-GRDSPHTRELVVEHGGFVYDSDSYAD
MMAR_1211|M.marinum_M               AHLSEAVRIHHELTGSAPRGWYG-GRDSPHTRELVVEHGGFLYDSDSYAD
MUL_2681|M.ulcerans_Agy99           AHLSEAVRIHHELTGSAPRGWYG-GRDSPHTRELVVEHGGFLYDSDSYAD
MAB_2935c|M.abscessus_ATCC_199      EHMAQAVQILRDLTGQAPLGWYT-GRDSPQTRQLVVEHGGFSYDSDSYAD
Mflv_0796|M.gilvum_PYR-GCK          DALDRGLAALADVAGVRPAGYRAPMWDLSWRTPALLAERGFLYDSSLMDA
                                      : ..:    :::*  * *:     * .     :: . ** ***.    

MSMEG_5728|M.smegmatis_MC2_155      DLPYWVQVDG----SDHLVVPYTLDTNDMRFASPAGFANGEEFFAHLRDA
Mvan_0934|M.vanbaalenii_PYR-1       DLPYWVRVHD----TEHLVVPYTLDTNDMRFASPAGFSNGDEFFAHLRDA
MMAR_1211|M.marinum_M               DLPYWVRVGA----SDHLVVPYTLDTNDMRFASPAGFSNGDEFFAHLRDA
MUL_2681|M.ulcerans_Agy99           DLPYWVRVGA----SDHLVVPYTLDTNDMRFASPAGFSNGDEFFAHLRDA
MAB_2935c|M.abscessus_ATCC_199      DLPYWVRVPAPGGVADHLVVPYTLDTNDMRFSSPAGFPSGEQFFTHLRDA
Mflv_0796|M.gilvum_PYR-GCK          DHPYELAVTPG-AAQSLVEIPIQWALDDWEQYCFLPDISGSGLIESPRKA
                                    * ** : *       . : :*     :* .  .     .*. ::   *.*

MSMEG_5728|M.smegmatis_MC2_155      FDVLYAEGLAGAPK--MLSVGLHCRLVGRPARTAALQRFLDHVQSHDKVW
Mvan_0934|M.vanbaalenii_PYR-1       FDVLYAEGCDGSPK--MLSVGLHCRLVGRPARIAALQRFLDHVQSHPRVW
MMAR_1211|M.marinum_M               FDVLYAEGRAGSPK--MLSVGLHCRLVGRPARTAALQRFLDHVRSHDRVW
MUL_2681|M.ulcerans_Agy99           FDVLYAEGRAGSPK--MLSVGLHCRLVGRPARTAALQRFLDHVRSHDRVW
MAB_2935c|M.abscessus_ATCC_199      FDCLYAEGEAGSPK--MLSVGLHCRLVGRPARTVALERFVDHVQAHDGVW
Mflv_0796|M.gilvum_PYR-GCK          RELWQLEFDALRRVGGCWVLTNHPFLTGRPSRAAELGELMRYVLDHDDVW
                                     :    *            :  *  *.***:* . * .:: :*  *  **

MSMEG_5728|M.smegmatis_MC2_155      LARRIEIAEHWRTVHPA-----------
Mvan_0934|M.vanbaalenii_PYR-1       LARRIEIAEHWRAVHPARDREPRIQV--
MMAR_1211|M.marinum_M               LARRVEIAEHWREVHPAPTG--------
MUL_2681|M.ulcerans_Agy99           LARRVEIAEHWREVHPAPTG--------
MAB_2935c|M.abscessus_ATCC_199      ITKRIDIAEHWRRVHPAGTEPNESSSPA
Mflv_0796|M.gilvum_PYR-GCK          VVSQA-----------------------
                                    :. :