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M. smegmatis MC2 155 MSMEG_3412 (-)

TLSRPPFEYSPITERAPLRWPNDARVAVYIGLNVEHFLPDHPSTSIWEGTAELRPDALNHGWRDYGARVG
IWRMIESLDRHGIRPSVLLNSMVVDEYPQIVAAGVQRDWTWLAHGQTNSILHTGMSVDDERLVLAEITKT
ITAATGRQPRGWMGPGLTETHHTPELLAELGFEYVLDWTNDDQPYPLTVPGMLSVPYTVELNDLLIFSKG
ITGPEFVQMVRDQYEQLHADSATGGRVLALALHPFVIGQPFRHKYLDQALGFLAGQPDVWLTTSDDIARH
YREQTAG*

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_3412	-	-	100% (288)	polysaccharide deacetylase family protein
M. smegmatis MC2 155	MSMEG_4130	-	e-142	90.80% (261)	polysaccharide deacetylase family protein
M. smegmatis MC2 155	MSMEG_5728	-	6e-23	30.96% (281)	polysaccharide deacetylase family protein

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	Mflv_0796	-	2e-16	27.07% (266)	polysaccharide deacetylase
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. abscessus ATCC 19977	MAB_2935c	-	2e-22	27.43% (288)	polysaccharide deacetylase family protein
M. marinum M	MMAR_1211	-	3e-22	28.07% (285)	chitinase
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	MUL_2681	-	6e-22	30.09% (226)	chitinase
M. vanbaalenii PYR-1	Mvan_3154	-	5e-34	31.71% (287)	polysaccharide deacetylase

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_3412|M.smegmatis_MC2_155      MTLS---------RPPFEYSPITERAPLRWPNDARVAVYIGLNVEHFLPD
Mvan_3154|M.vanbaalenii_PYR-1       MTER---------RAPAPFALSTQAPRLTPPAAATVLVNVVVNLEHWTLD
MMAR_1211|M.marinum_M               MTG----------YPRDMTGYGRTPPDPQWPGGALIAVQFVLNYEEGAES
MUL_2681|M.ulcerans_Agy99           MTG----------YPRDMTGYGRTPPDPQWRGGALIAVQFVLNYEEGAES
MAB_2935c|M.abscessus_ATCC_199      MAHNEAHDEAPPATPRDMVGYGRTPPHPRWPGNARIAVQFVLNYEEGAEN
Mflv_0796|M.gilvum_PYR-GCK          ------------------------MDAFRWPDGKTAAAAFTFDVDAESAV
                                                                         . . .: :     

MSMEG_3412|M.smegmatis_MC2_155      HPSTSIWEGT---AELRPDALN-------HGWRDYGARVGIWRMIESLDR
Mvan_3154|M.vanbaalenii_PYR-1       QPMPRAALPAPHGVSVVPDVAN-------HSWVLYGLRSGLPRLAEALAP
MMAR_1211|M.marinum_M               SVLDGDSGSETFLSEIVPAQSFPNRHMSMESLYEYGSRAGVWRVLRVCEQ
MUL_2681|M.ulcerans_Agy99           SVLDGDSGSETFLSEIVPAQSFPNRHMSMESLYEYGSRAGVWRVLRVCEQ
MAB_2935c|M.abscessus_ATCC_199      NVLDGSAGSETFLSEMVPVEAFPNRHMSMESLYEYGSRAGLWRVLRVFER
Mflv_0796|M.gilvum_PYR-GCK          LWGDESVGAR----------------MSVMSHQAYGPLVGIPRILDLLEQ
                                                                  .   **   *: *:      

MSMEG_3412|M.smegmatis_MC2_155      HGIRPSVLLNSMVVDEYPQIVAAGVQRDWTWLAHGQTNSILHTGMSVDDE
Mvan_3154|M.vanbaalenii_PYR-1       LGSAVTVALNADVIDHYPQVADLIDERGWEVVAHGVRQRSIQS---YDEE
MMAR_1211|M.marinum_M               SGVPLTIFAVAQAMQRNPEVAKVFRELGHEIACHGLRWKSYQEID-RDTE
MUL_2681|M.ulcerans_Agy99           SGVPLTIFAVAQAMQRNPEVAKGFRELGHEIACHGLRWKSYQEID-RDTE
MAB_2935c|M.abscessus_ATCC_199      RGLPLTIFAVATALQRNPEAVSAFGELGHEIACHGLRWQSYQLVP-PDIE
Mflv_0796|M.gilvum_PYR-GCK          HQITSTFFVPGHTADRYPEAVRSIVGAGHEIAHHGYLHEQPTALT-LEEE
                                         :.   . . :. *: .      .     **            : *

MSMEG_3412|M.smegmatis_MC2_155      RLVLAEITKTITAATGRQ--PRGWMGPGLTETHHTPELLAELGFEYVLDW
Mvan_3154|M.vanbaalenii_PYR-1       EPVVAEAVSRIRQRFGAGGWPRGWLSPGMNQTDESLRIMREHGLEFNHDW
MMAR_1211|M.marinum_M               RAHLSEAVRIHHELTGSA--PRGWYG-GRDSPHTRELVVEHGGFLYDSDS
MUL_2681|M.ulcerans_Agy99           RAHLSEAVRIHHELTGSA--PRGWYG-GRDSPHTRELVVEHGGFLYDSDS
MAB_2935c|M.abscessus_ATCC_199      REHMAQAVQILRDLTGQA--PLGWYT-GRDSPQTRQLVVEHGGFSYDSDS
Mflv_0796|M.gilvum_PYR-GCK          IDALDRGLAALADVAGVR--PAGYRAPMWDLSWRTPALLAERGFLYDSSL
                                       : .         *    * *:       .     :: . *: :  . 

MSMEG_3412|M.smegmatis_MC2_155      TNDDQPYPLTVPG------MLSVPYTVELNDLLIFS-KGITGP-EFVQMV
Mvan_3154|M.vanbaalenii_PYR-1       MIDDRPVWLTTPAG----PILGLPYTLTLNDVTTYQ-IGLQADGALADRT
MMAR_1211|M.marinum_M               YADDLPYWVRV----GASDHLVVPYTLDTNDMRFASPAGFSNGDEFFAHL
MUL_2681|M.ulcerans_Agy99           YADDLPYWVRV----GASDHLVVPYTLDTNDMRFASPAGFSNGDEFFAHL
MAB_2935c|M.abscessus_ATCC_199      YADDLPYWVRVPAPGGVADHLVVPYTLDTNDMRFSSPAGFPSGEQFFTHL
Mflv_0796|M.gilvum_PYR-GCK          MDADHPYELAVTPG-AAQSLVEIPIQWALDDWEQYCFLPDISGSGLIESP
                                       * *  : .         : :*     :*              :    

MSMEG_3412|M.smegmatis_MC2_155      R--DQYEQLHADSATG-GRVLALALHPFVIGQPFRHKYLDQALGFLAGQP
Mvan_3154|M.vanbaalenii_PYR-1       L--RSLERHRVEGAVN-PVVMPIGLHPHIVGVAHRIGEIDEIVAAVVGAP
MMAR_1211|M.marinum_M               R--DAFDVLYAEGRAGSPKMLSVGLHCRLVGRPARTAALQRFLDHVRSHD
MUL_2681|M.ulcerans_Agy99           R--DAFDVLYAEGRAGSPKMLSVGLHCRLVGRPARTAALQRFLDHVRSHD
MAB_2935c|M.abscessus_ATCC_199      R--DAFDCLYAEGEAGSPKMLSVGLHCRLVGRPARTVALERFVDHVQAHD
Mflv_0796|M.gilvum_PYR-GCK          RKARELWQLEFDALRRVGGCWVLTNHPFLTGRPSRAAELGELMRYVLDHD
                                               :.         :  *  : * . *   : . :  :    

MSMEG_3412|M.smegmatis_MC2_155      DVWLTTSDDIARHYREQTAG-----------
Mvan_3154|M.vanbaalenii_PYR-1       DVAAVTSSQIHDWFVGQVPAP----------
MMAR_1211|M.marinum_M               RVWLARRVEIAEHWREVHPAPTG--------
MUL_2681|M.ulcerans_Agy99           RVWLARRVEIAEHWREVHPAPTG--------
MAB_2935c|M.abscessus_ATCC_199      GVWITKRIDIAEHWRRVHPAGTEPNESSSPA
Mflv_0796|M.gilvum_PYR-GCK          DVWVVSQA-----------------------
                                     *  .