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TDSTTELTPAAPVSWPDGKTCAVAFTFDVDAESPLLTTDPAFADRMGTMSHQAYGPLVGVPRLLGILDEF NVPGTFFVPGYTAHRHPEPIRSIARAGHEIAHHGYLHESLVGADEDTERKILTRGIEALEEVAGVHPVGY RAPMWEMNWHTPKLLAEFGFLYDSTLMDSDHPYELAVGDGSLVELPVSWALDDWQQYCFVPDFSGTGLIE TPAKAIELWRAELNAMRDIGGAWVLTNHPFLSGRPGRAAALREFIAEVCAMDDVWVAGMSQIAEHVRAQK LTPRTLTRPELTPVAE*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_4373 | - | - | 100% (297) | polysaccharide deacetylase, putative |
| M. smegmatis MC2 155 | MSMEG_1074 | - | e-104 | 62.55% (275) | polysaccharide deacetylase |
| M. smegmatis MC2 155 | MSMEG_2970 | - | 6e-68 | 46.01% (276) | polysaccharide deacetylase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_0796 | - | 4e-97 | 62.93% (259) | polysaccharide deacetylase |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2935c | - | 5e-17 | 28.86% (298) | polysaccharide deacetylase family protein |
| M. marinum M | MMAR_1211 | - | 4e-23 | 31.96% (291) | chitinase |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2681 | - | 2e-22 | 31.62% (291) | chitinase |
| M. vanbaalenii PYR-1 | Mvan_0047 | - | 1e-105 | 62.14% (280) | polysaccharide deacetylase |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1211|M.marinum_M MTG----------YPRDMTGYGRTPPDPQWPGGALIAVQFVLNYEEGAES
MUL_2681|M.ulcerans_Agy99 MTG----------YPRDMTGYGRTPPDPQWRGGALIAVQFVLNYEEGAES
MAB_2935c|M.abscessus_ATCC_199 MAHNEAHDEAPPATPRDMVGYGRTPPHPRWPGNARIAVQFVLNYEEGAEN
Mflv_0796|M.gilvum_PYR-GCK ---------------MDA---------FRWPDGKTAAAAFTFDVDA--ES
Mvan_0047|M.vanbaalenii_PYR-1 --------------MMDR---------FRWPDGKTAAAAFTFDVDA--ES
MSMEG_4373|M.smegmatis_MC2_155 --------------MTDSTTELTPAAPVSWPDGKTCAVAFTFDVDA--ES
* * .. *. *.:: : *.
MMAR_1211|M.marinum_M SVLDGDSGSETFLSEIVPAQSFPNRHMSMESLYEYGSRAGVWRVLRVCEQ
MUL_2681|M.ulcerans_Agy99 SVLDGDSGSETFLSEIVPAQSFPNRHMSMESLYEYGSRAGVWRVLRVCEQ
MAB_2935c|M.abscessus_ATCC_199 NVLDGSAGSETFLSEMVPVEAFPNRHMSMESLYEYGSRAGLWRVLRVFER
Mflv_0796|M.gilvum_PYR-GCK AVLWGDES--------------VGARMSVMSHQAYGPLVGIPRILDLLEQ
Mvan_0047|M.vanbaalenii_PYR-1 AILWGNES--------------VGARMSVMSHQAYGPLVGIPRILDLLEQ
MSMEG_4373|M.smegmatis_MC2_155 PLLTTDPA--------------FADRMGTMSHQAYGPLVGVPRLLGILDE
:* . . :*. * **. .*: *:* : :.
MMAR_1211|M.marinum_M SGVPLTIFAVAQAMQRNPEVAKVFRELGHEIACHGLRWKSYQEIDRDTER
MUL_2681|M.ulcerans_Agy99 SGVPLTIFAVAQAMQRNPEVAKGFRELGHEIACHGLRWKSYQEIDRDTER
MAB_2935c|M.abscessus_ATCC_199 RGLPLTIFAVATALQRNPEAVSAFGELGHEIACHGLRWQSYQLVPPDIER
Mflv_0796|M.gilvum_PYR-GCK HQITSTFFVPGHTADRYPEAVRSIVGAGHEIAHHGYLHEQPTALTLEEEI
Mvan_0047|M.vanbaalenii_PYR-1 HQVPSTFFVPGHTADRYPEAVRSIVAAGHEIAHHGYLHEQPTALTLEQEI
MSMEG_4373|M.smegmatis_MC2_155 FNVPGTFFVPGYTAHRHPEPIRSIARAGHEIAHHGYLHESLVGADEDTER
:. *:*. . : .* ** : ***** ** :. : *
MMAR_1211|M.marinum_M AHLSEAVRIHHELTGSAPRGWYG-GRDSPHTRELVVEHGGFLYDSDSYAD
MUL_2681|M.ulcerans_Agy99 AHLSEAVRIHHELTGSAPRGWYG-GRDSPHTRELVVEHGGFLYDSDSYAD
MAB_2935c|M.abscessus_ATCC_199 EHMAQAVQILRDLTGQAPLGWYT-GRDSPQTRQLVVEHGGFSYDSDSYAD
Mflv_0796|M.gilvum_PYR-GCK DALDRGLAALADVAGVRPAGYRAPMWDLSWRTPALLAERGFLYDSSLMDA
Mvan_0047|M.vanbaalenii_PYR-1 DALDRGLAALADVAGVRPVGYRAPMWDLSWRTPALLAERDFLYDSSLMDA
MSMEG_4373|M.smegmatis_MC2_155 KILTRGIEALEEVAGVHPVGYRAPMWEMNWHTPKLLAEFGFLYDSTLMDS
: ..: :::* * *: : :: . .* ***
MMAR_1211|M.marinum_M DLPYWVRV----GASDHLVVPYTLDTNDMRFASPAGFSNGDEFFAHLRDA
MUL_2681|M.ulcerans_Agy99 DLPYWVRV----GASDHLVVPYTLDTNDMRFASPAGFSNGDEFFAHLRDA
MAB_2935c|M.abscessus_ATCC_199 DLPYWVRVPAPGGVADHLVVPYTLDTNDMRFSSPAGFPSGEQFFTHLRDA
Mflv_0796|M.gilvum_PYR-GCK DHPYELAV-TPGAAQSLVEIPIQWALDDWEQYCFLPDISGSGLIESPRKA
Mvan_0047|M.vanbaalenii_PYR-1 DHPYELAI-TPGAQESLVEIPIQWALDDWEQYCFLPDISGSGLIETPRKA
MSMEG_4373|M.smegmatis_MC2_155 DHPYELAV-GDG---SLVELPVSWALDDWQQYCFVPDFSGTGLIETPAKA
* ** : : . : :* :* . . .* :: .*
MMAR_1211|M.marinum_M FDVLYAEGRAGSPK--MLSVGLHCRLVGRPARTAALQRFLDHVRSHDRVW
MUL_2681|M.ulcerans_Agy99 FDVLYAEGRAGSPK--MLSVGLHCRLVGRPARTAALQRFLDHVRSHDRVW
MAB_2935c|M.abscessus_ATCC_199 FDCLYAEGEAGSPK--MLSVGLHCRLVGRPARTVALERFVDHVQAHDGVW
Mflv_0796|M.gilvum_PYR-GCK RELWQLEFDALRRVGGCWVLTNHPFLTGRPSRAAELGELMRYVLDHDDVW
Mvan_0047|M.vanbaalenii_PYR-1 RELWQSEFDALRKVGGCWVLTNHPFLTGRPSRAAELGELMRYVLDHDDVW
MSMEG_4373|M.smegmatis_MC2_155 IELWRAELNAMRDIGGAWVLTNHPFLSGRPGRAAALREFIAEVCAMDDVW
: * * : * * ***.*:. * .:: * * **
MMAR_1211|M.marinum_M LARRVEIAEHWREVHPAPTG-----------
MUL_2681|M.ulcerans_Agy99 LARRVEIAEHWREVHPAPTG-----------
MAB_2935c|M.abscessus_ATCC_199 ITKRIDIAEHWRRVHPAGTEPNESSSPA---
Mflv_0796|M.gilvum_PYR-GCK VVSQA--------------------------
Mvan_0047|M.vanbaalenii_PYR-1 VSSLGAVAEHVRSLNLSPRSITPPDVPR---
MSMEG_4373|M.smegmatis_MC2_155 VAGMSQIAEHVRAQKLTPRTLTRPELTPVAE
: