For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RFTTGEGDPVAGVSFIEGGARFEEVAEKFGTARPDETWEGGSAPRAYDRRVDLQEKHVAILRDADRQIGF VMSREADELREVRRILDGLHEQLTAFGEYSKWVGVGQIGKLAQAAIEFEAVRQAVTEASKKMWDMHEYAN NNAAVVTEALELYRKVSAEATSQDSIGDFDPPR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5710 | - | - | 100% (174) | hypothetical protein MSMEG_5710 |
M. smegmatis MC2 155 | MSMEG_0055 | - | 3e-15 | 30.64% (173) | hypothetical protein MSMEG_0055 |
M. smegmatis MC2 155 | MSMEG_0723 | - | 6e-13 | 32.30% (161) | hypothetical protein MSMEG_0723 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3894 | - | 2e-07 | 26.40% (125) | hypothetical protein Mb3894 |
M. gilvum PYR-GCK | Mflv_0157 | - | 1e-07 | 27.33% (161) | hypothetical protein Mflv_0157 |
M. tuberculosis H37Rv | Rv3864 | - | 2e-07 | 26.40% (125) | hypothetical protein Rv3864 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_5431 | - | 3e-08 | 34.15% (82) | hypothetical protein MMAR_5431 |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_2666 | - | 4e-09 | 27.78% (162) | PUTATIVE putative hypothetical protein MSMEG_0078 |
M. ulcerans Agy99 | MUL_5045 | - | 1e-05 | 28.24% (85) | hypothetical protein MUL_5045 |
M. vanbaalenii PYR-1 | Mvan_0656 | - | 1e-09 | 27.67% (159) | hypothetical protein Mvan_0656 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0157|M.gilvum_PYR-GCK -----------MALGKLWVDANYFYGVADHANMMSSDPALGSAAIATDAA TH_2666|M.thermoresistible__bu -------------MLDAYSTLNWGKSVVEHPMSAKDHTGWGIAGTGADFV Mb3894|M.bovis_AF2122/97 -------------------------------------------------- Rv3864|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_5431|M.marinum_M -----MY---LSQLQRLVQQISRWVRGDGNLQN------------FQDIQ MUL_5045|M.ulcerans_Agy99 -----MHPDEAATHNRSFEDLLAYLEPDAGLFEPDGFESDAWETQFDGFE Mvan_0656|M.vanbaalenii_PYR-1 MGLFDFYSDLMQHVGESMQRVDPFGPMGAAGEAVTSLFAVGNIVGDHGTD MSMEG_5710|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0157|M.gilvum_PYR-GCK ILM-QSLAAVGGSTMGATGLATSVATPIINAGLMTLTAASNTLG-FGRPE TH_2666|M.thermoresistible__bu TLM-QGMTEAG-SGLDQGRLAKAAATPIIRAALLAMMVMSNTCG-VGTPE Mb3894|M.bovis_AF2122/97 ---------------------MASGSGLCKTTSNFIWGQLLLLG-EGIPD Rv3864|M.tuberculosis_H37Rv ---------------------MASGSGLCKTTSNFIWGQLLLLG-EGIPD MMAR_5431|M.marinum_M EGG-GNPP-PAQEGAPDNSPWARRGSVVCGVTEGILGLLLALLG-EAVPS MUL_5045|M.ulcerans_Agy99 SDV-GEIEREAEAGAADNPHELCPGTVVCGATLTILGVMWGWLG-DESPE Mvan_0656|M.vanbaalenii_PYR-1 AMWNLAGDAGDVASVAQSMLPFAKQTLIIEGGLKMISVMEEQSGGANVPS MSMEG_5710|M.smegmatis_MC2_155 --------------------------------------MRFTTG-EGDPV * * Mflv_0157|M.gilvum_PYR-GCK DGERFTDGARQFSEANDELQQAVPPPDWQG-DASDAYGLRNTEQQQRAGS TH_2666|M.thermoresistible__bu KGDRFEEGAQAFEAAGEALGATKSPESWQG-KASNTYTDRNDEQRARAER Mb3894|M.bovis_AF2122/97 PGDIFNTGSSLFKQISDKMGLAIPGTNWIG-QAAEAYLNQNIAQQLRAQV Rv3864|M.tuberculosis_H37Rv PGDIFNTGSSLFKQISDKMGLAIPGTNWIG-QAAEAYLNQNIAQQLRAQV MMAR_5431|M.marinum_M RGESLDRSGSMFDGVSTQIATLDPDGGWRG-NAARAYGAKNLAQSQHTTL MUL_5045|M.ulcerans_Agy99 QGDRLASSGSLFDDVGAQVAALGPDGGWRG-NAAQAYWVQNLAQSRHATL Mvan_0656|M.vanbaalenii_PYR-1 EGESYSDSAHRFNQVGDTLASAMPDDRWRG-TAADAYTLANEQQYARAGK MSMEG_5710|M.smegmatis_MC2_155 AGVSFIEGGARFEEVAEKFGTARPDETWEGGSAPRAYDRRVDLQEKHVAI * .. *. . . * * *. :* * :. Mflv_0157|M.gilvum_PYR-GCK MATFDGQIQEVLAEEAGQVQDTRDFVSTRQVMLAAAIPAAITAKLIPPGG TH_2666|M.thermoresistible__bu MAAIDRTVKEILDAEAHQVDVARKMLDRCQTVLSLSIPAAIAAKAIPFKG Mb3894|M.bovis_AF2122/97 MGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLG Rv3864|M.tuberculosis_H37Rv MGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLG MMAR_5431|M.marinum_M IADLDRLTGELVSSQADAVKRARDLLSAEIWIVLVLLVVCIGLELHGPEG MUL_5045|M.ulcerans_Agy99 MADLDRLTAGLVSSQADAVKQARERLSVLIAVVLGVLVVCAGLELGGPEG Mvan_0656|M.vanbaalenii_PYR-1 LADADLKVRMALSAEAGEVRTARRMFNQAATVLGNAIVPALAARALGKHG MSMEG_5710|M.smegmatis_MC2_155 LRDADRQIGFVMSREADELREVRRILDGLHEQLT-AFGEYSKWVGVGQIG : * : :* : .* . : * Mflv_0157|M.gilvum_PYR-GCK AAAAMAIELAAVAATVPFAMQRVTEMVSHSADNADRIRQIGSHYGVVDES TH_2666|M.thermoresistible__bu PAISTAIEVAAVAGTAPLASLRYNELTRAVIRNAARMTQAAGEYSSVASA Mb3894|M.bovis_AF2122/97 HLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTT Rv3864|M.tuberculosis_H37Rv HLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTT MMAR_5431|M.marinum_M QILSFHIAIPICTMAVFTAATALGVLAATTSQNASAVQAATQRLTAMAAA MUL_5045|M.ulcerans_Agy99 QLPSFHIAVAACGVVQVAAAATLIGLANKTSSNASSLRAATQRATEMLAA Mvan_0656|M.vanbaalenii_PYR-1 KAISYGIETGAVASSMPICIWHMTQLAGHSARAAETLKDAVALYEQVANE MSMEG_5710|M.smegmatis_MC2_155 KLAQAAIEFEAVRQAVTEASKKMWDMHEYANNNAAVVTEALELYRKVSAE : : * : : Mflv_0157|M.gilvum_PYR-GCK AQ-----------------------------MPGGLSGAQSGTPAPLRVS TH_2666|M.thermoresistible__bu AN-----------------------------PS----------------- Mb3894|M.bovis_AF2122/97 LPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGS Rv3864|M.tuberculosis_H37Rv LPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTPGS MMAR_5431|M.marinum_M LT----------------------------TGADTVPSSPKMTFPPIHSL MUL_5045|M.ulcerans_Agy99 RS----------------------------AGSDAIPGSAGMTAPDVG-- Mvan_0656|M.vanbaalenii_PYR-1 GY------------------------------SVRM-------------- MSMEG_5710|M.smegmatis_MC2_155 AT-----------------------------SQDSIGDFDPPR------- Mflv_0157|M.gilvum_PYR-GCK ------------------------------------ESIRGTAGIQQNVA TH_2666|M.thermoresistible__bu -------------------------------------------------- Mb3894|M.bovis_AF2122/97 PLFPDLPSFPGFPGFPSLPGFPGLPGFPEFPAIPGFPALPGLPSIPNLFP Rv3864|M.tuberculosis_H37Rv PLFPDLPSFPGFP------------GFPEFPAIPGFPALPGLPSIPNLFP MMAR_5431|M.marinum_M SEFDLTEAT--------------------------GPTPPQLPDLQSTLA MUL_5045|M.ulcerans_Agy99 -------------------------------------TPP---------- Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5710|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0157|M.gilvum_PYR-GCK ATIDSARSAPDGSAGDVFKTHGVVCT------------------------ TH_2666|M.thermoresistible__bu -------------------------------------------------- Mb3894|M.bovis_AF2122/97 GLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLG--FGNLLSF Rv3864|M.tuberculosis_H37Rv GLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLG--FGNLLSF MMAR_5431|M.marinum_M ELPGAPEFHLATRAGAGFPDFGAPQLPITELTGLPTLPDPTNLTDPTSML MUL_5045|M.ulcerans_Agy99 -------------SGA------RPRL------------------------ Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5710|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0157|M.gilvum_PYR-GCK -----------------STAAALKSAELARRSAAEKMHLISTDLSAKLGS TH_2666|M.thermoresistible__bu -------------------------------------------------- Mb3894|M.bovis_AF2122/97 ASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQ Rv3864|M.tuberculosis_H37Rv ASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGGQQ MMAR_5431|M.marinum_M ADLPTIAQLSTTLSQLTNLAGPTSATTQPAQQHTTPADHRTQDDATNTPD MUL_5045|M.ulcerans_Agy99 -----------------DVAGDTARIRR-------------------TPD Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5710|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0157|M.gilvum_PYR-GCK SATEYSHTE-----------QQNADAVDRQMPPR--------- TH_2666|M.thermoresistible__bu ------------------------------------------- Mb3894|M.bovis_AF2122/97 HATLVSDKKEDEEGAAAGVAEAERAPIDAGTAASQRGQEGTVL Rv3864|M.tuberculosis_H37Rv HATLVSDKKEDEE----GVAEAERAPIDAGTAASQRGQEGTVL MMAR_5431|M.marinum_M TATATAATS-----------SSERAPLDTQTHPHRQRLLT--- MUL_5045|M.ulcerans_Agy99 RGAAYAELL-----------DRS-------------------- Mvan_0656|M.vanbaalenii_PYR-1 ------------------------------------------- MSMEG_5710|M.smegmatis_MC2_155 -------------------------------------------