For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSDTAVVIVDMLNTYEHEDAELLAPNVEKIIDPLVKLIGEARDREDVDLIYVNDNYGDFTAQFSDIVADA LDGKRPDLVRPILPYDGCRLLTKVRHSVFYATALDYLLGRLGAKRVILAGQVTEQCILYSALDAYVRHFE LVVPSDAVAHIDAELGDAALEMMRRNMSADVIPAVDCLS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4618 | - | - | 100% (179) | isochorismatase family protein |
M. smegmatis MC2 155 | MSMEG_4126 | - | 4e-05 | 32.88% (73) | hydrolase, isochorismatase family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4511 | - | 3e-61 | 63.16% (171) | isochorismatase hydrolase |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2557c | - | 6e-58 | 57.87% (178) | putative isochorismatase hydrolase EntB |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_1736 | - | 1e-65 | 68.39% (174) | isochorismatase family protein |
M. thermoresistible (build 8) | TH_2198 | - | 6e-80 | 79.78% (178) | isochorismatase family protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1859 | - | 2e-68 | 64.61% (178) | isochorismatase hydrolase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4511|M.gilvum_PYR-GCK --------MDISSAMSETALLVIDMFNTYDHPDAEPLADNVAAIVDPLTE Mvan_1859|M.vanbaalenii_PYR-1 --------------MSETALLVIDMFNTYTHPDAEQLADNVVEVVDPIAE MAB_2557c|M.abscessus_ATCC_199 MDLVATAAQRVPQGMSETALLVIDMFNTYRHPDADQLAANVATIVEPLAG MSMEG_4618|M.smegmatis_MC2_155 --------------MSDTAVVIVDMLNTYEHEDAELLAPNVEKIIDPLVK TH_2198|M.thermoresistible__bu --------------MSDTAVVVVDMFNTYDHEDAELLTPNVESILDPLAK MAV_1736|M.avium_104 -------------------MLVVDMMNSYQHPDAENLIPNVEKIIEPLTG ::::**:*:* * **: * ** :::*:. Mflv_4511|M.gilvum_PYR-GCK LIRRSNERDDVAVVYVNDNYGDFAAEPSDIVEAAVNGARPELVRPLVPGP Mvan_1859|M.vanbaalenii_PYR-1 LVARAAERDDVDLVYVNDNYGDFTATHSDVVRAALEGARPELVRPLVPAS MAB_2557c|M.abscessus_ATCC_199 LVSRAQAHTDMDLIYVNDNHGDFAAGPSAIVGAALHGAHPELVRPLVPEG MSMEG_4618|M.smegmatis_MC2_155 LIGEARDREDVDLIYVNDNYGDFTAQFSDIVADALDGKRPDLVRPILPYD TH_2198|M.thermoresistible__bu LIAEARHRDDVDLIYVNDNHGDFTAEFSDVVRTALDGARPDLVRPIVPDD MAV_1736|M.avium_104 LVRRARESAGVDLVYVNDNYGDFTAQFSDLVRSALDGARPDLVKPIAPVS *: .: .: ::*****:***:* * :* *:.* :*:**:*: * Mflv_4511|M.gilvum_PYR-GCK E-ARFLTKVRHSAFYATSLDYLLTRLDTRRIILTGQVTEQCVLYTALDGY Mvan_1859|M.vanbaalenii_PYR-1 G-SRFLTKVRHSAFYATPLDYLLSRLGVRRIVLTGQVTEQCILYTALDGY MAB_2557c|M.abscessus_ATCC_199 E-FQFVTKVRHSIFYASPLEYLLGRLRTRQLILCGQVTEQCVLYSALDAY MSMEG_4618|M.smegmatis_MC2_155 G-CRLLTKVRHSVFYATALDYLLGRLGAKRVILAGQVTEQCILYSALDAY TH_2198|M.thermoresistible__bu G-CRALLKVRHSVFYATALEYLLTRLSARRVILTGQVTEQCILYSALDAY MAV_1736|M.avium_104 GEAASLTKVRHSAFYSTALAYLLSRLGTKRLIITGQVTEQCILYTALDAY : ***** **::.* *** ** .::::: *******:**:***.* Mflv_4511|M.gilvum_PYR-GCK VRHYDVVVPPDTVAHIDDKLGTAALEMMERNMKAELPESTASLP Mvan_1859|M.vanbaalenii_PYR-1 VRHYDVVVPPDAVAHIDSQLGEAALEMMRRNMKAELSKSTECLP MAB_2557c|M.abscessus_ATCC_199 VRHFDVVIPTDAVAPIDPSLGESAVEMMRRNMRAELCTSTRCIH MSMEG_4618|M.smegmatis_MC2_155 VRHFELVVPSDAVAHIDAELGDAALEMMRRNMSADVIPAVDCLS TH_2198|M.thermoresistible__bu VRHFEVVVPPDAVAHIDAGLGEAALQMMARNMSAELPPSADCLP MAV_1736|M.avium_104 VRHFPVVIPTDAVAHIDPELGAAACKMMEQNMSAELTTAADCLG ***: :*:*.*:** ** ** :* :** :** *:: :. .: