For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_4182 (-)

annotation: arabinose-proton symporter
coordinates: 4258730 - 4260226
length: 498

NVIGITLLPRGRIMSHGPVSDDTPSIFGDDDQAASSGRTAVRIAAVAALGGLLFGYDSAVINGAVDSIQE
DFGIGNYALGLAVASALLGAAAGALSAGRIADRIGRIAVMKIAAVLFFISAFGTGFAPETVTLVVFRIVG
GIGVGVASVIAPAYIAETSPPGIRGRLGSLQQLAIVLGIFTSFVVNWLLQWAAGGPNEVLAMGLDAWRWM
FLAMAVPAVLYGALAFTIPESPRYLVATHKIPEARRVLSMLLGQKNLEITITRIRDTLEREDKPSWRDLK
KPTGGIYGIVWVGLGLSIFQQFVGINVIFYYSNVLWQAVGFSADQSAIYTVITSVVNVLTTLIAIALIDK
IGRKPLLLIGSSGMAVTLATMAVIFANATVKPDGTPDLPGASGLIALIAANLFVVAFGMSWGPVVWVLLG
EMFPNRFRAAALGLAAAGQWAANWLITVSFPELRNHLGLAYGFYALCAVLSFLFVSKWVEETRGKNLEDM
HAEALGH*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_4182--100% (498)arabinose-proton symporter
M. smegmatis MC2 155MSMEG_2001-3e-6357.00% (207) sugar transporter
M. smegmatis MC2 155MSMEG_2004-3e-5453.05% (213) arabinose-proton symporter

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3364sugI4e-5128.29% (463) sugar-transport integral membrane protein SugI
M. gilvum PYR-GCKMflv_3055-0.085.30% (483) sugar transporter
M. tuberculosis H37RvRv3331sugI3e-5028.08% (463) sugar-transport integral membrane protein SugI
M. leprae Br4923MLBr_01562-9e-1033.61% (122) putative transmembrane efflux protein
M. abscessus ATCC 19977MAB_0692c-0.070.50% (461) sugar transporter
M. marinum MMMAR_1191sugI2e-5028.04% (453) sugar-transport integral membrane protein SugI
M. avium 104MAV_4306-4e-5329.55% (467) transporter, major facilitator superfamily protein
M. thermoresistible (build 8)TH_2640-1e-13674.15% (325) PUTATIVE sugar transporter
M. ulcerans Agy99MUL_1444sugI7e-5128.04% (453) sugar-transport integral membrane protein SugI
M. vanbaalenii PYR-1Mvan_3472-0.087.06% (479) sugar transporter

CLUSTAL 2.0.9 multiple sequence alignment


Mb3364|M.bovis_AF2122/97            MTTLWQPHRNDYSPIPGRGVHARRGARRPRPRGGRAERPGTGQLTRSGRR
Rv3331|M.tuberculosis_H37Rv         MTTLWQPHRNDYSPIPGRGVHARRGARRPRPRGGRAERPGTGQLTRSGRR
MMAR_1191|M.marinum_M               -----------------------------------------------MQR
MUL_1444|M.ulcerans_Agy99           -----------------------------------------------MQR
MAV_4306|M.avium_104                -------------------------------------------MARGSRR
Mflv_3055|M.gilvum_PYR-GCK          -----------------------MAGQGGPAGESPELY-EKGQDFSSGKT
Mvan_3472|M.vanbaalenii_PYR-1       -----------------------MAGQGGPVGDGPEIF-EQGQEFSSGKT
MSMEG_4182|M.smegmatis_MC2_155      ----------MNVIGITLLPRGRIMSHGPVSDDTPSIFGDDDQAASSGRT
TH_2640|M.thermoresistible__bu      --------------------------------------------------
MAB_0692c|M.abscessus_ATCC_199      --------------------------------------MSEEDEFSSGHS
MLBr_01562|M.leprae_Br4923          MVTLYDHERAVHNWTAARSDRPAPSRLTQQVEPASERTSKYPTLLPSGRF
                                                                                      

Mb3364|M.bovis_AF2122/97            A----LLVGLTAASVGVLYGYDLSAIAGALLSLSEEFELTTREQELLTTT
Rv3331|M.tuberculosis_H37Rv         A----LLVGLTAASVGVLYGYDLSAIAGALLSLSEEFELTTREQELLTTT
MMAR_1191|M.marinum_M               G----ILVALTAASVGLIYGYDLSIIAGAQLFITEEFGLSTHQQELLTTM
MUL_1444|M.ulcerans_Agy99           G----ILVALTAASVGLIYGYDLSIIAGAQLFITEEFGLSTHQQELLTTM
MAV_4306|M.avium_104                G----LLVGLTAASVGVIYGYDLSIIAGAQLFVTEDFGLSTRQQELLTTM
Mflv_3055|M.gilvum_PYR-GCK          A----IRIASVAALGGLLFGYDSAVINGAVASIQEDFGIGNYALGLAVAS
Mvan_3472|M.vanbaalenii_PYR-1       A----VRIASVAALGGLLFGYDSAVINGAVDSIQEDFGIGNAELGFAVAS
MSMEG_4182|M.smegmatis_MC2_155      A----VRIAAVAALGGLLFGYDSAVINGAVDSIQEDFGIGNYALGLAVAS
TH_2640|M.thermoresistible__bu      --------------------------------------------------
MAB_0692c|M.abscessus_ATCC_199      A----LRIASVAALGGLLFGYDSAVINGAVQAIQDAFAIRDAELGFAVAS
MLBr_01562|M.leprae_Br4923          PSGRFIAAVIVIGGMQLLATMDSTVAIVALPKIQNELSLSDAGRSWGITA
                                                                                      

Mb3364|M.bovis_AF2122/97            AVLGQIAGALGGGILANAIGRKKSVVLIVAGYAVFALLGATSVSVPMLVV
Rv3331|M.tuberculosis_H37Rv         AVLGQIAGALGGGILANAIGRKKSVVLIVAGYAVFALLGATSVSVPMLVV
MMAR_1191|M.marinum_M               VVIGQIVGALGAGVLANAIGRKKSVVMLLVAYTMFAVLGSLSVSLPMLLA
MUL_1444|M.ulcerans_Agy99           VVIGQIVGALGAGVLANAIGRKKSVVMLLVAYTMFAVLGALSVSLPMLLA
MAV_4306|M.avium_104                AVIGQIGGALFAGVLANAIGRRRSVLLILSGYAVFALLAAFSVGLPMLLT
Mflv_3055|M.gilvum_PYR-GCK          ALLGAAVGALSAGRIADRIGRIAVMKIAAVLFLLSAFGTAFAPETITLVI
Mvan_3472|M.vanbaalenii_PYR-1       ALLGAAAGAMTAGRIADRIGRIAVMKIAAVLFLVSAFGTGFAHEVWAVVL
MSMEG_4182|M.smegmatis_MC2_155      ALLGAAAGALSAGRIADRIGRIAVMKIAAVLFFISAFGTGFAPETVTLVV
TH_2640|M.thermoresistible__bu      --------------------------------------------------
MAB_0692c|M.abscessus_ATCC_199      ALLGAAVGAMTAGRVADRIGRVAVMKIAAALFLLSAVGAGLAPNIELLVL
MLBr_01562|M.leprae_Br4923          YVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEVTLVI
                                                                                      

Mb3364|M.bovis_AF2122/97            ARLLLGVTIGLSVVVVPVYVAESAPAA-VRGSLVTAYQLATLSGIVVGYL
Rv3331|M.tuberculosis_H37Rv         ARLLLGVTIGLSVVVVPVYVAESAPAA-VRGSLVTAYQLATLSGIVVGYL
MMAR_1191|M.marinum_M               ARFLLGLAVGVSIVVVPVYVAESAPAA-VRGSLLTVYQLTTVSGLIVGYL
MUL_1444|M.ulcerans_Agy99           ARFLLGLAVGVSIVVVPVYVAESAPAA-VRGSLLTVYQLTTVSGLIVGYL
MAV_4306|M.avium_104                ARLLLGLTIGVTVVVVPVYVAESAPTA-VRGALLTAYQLAIVSGLIVGYL
Mflv_3055|M.gilvum_PYR-GCK          GRIVGGVGVGVASVIAPAYIAETSPPG-IRGRLGSLQQLAIVSGIFASFA
Mvan_3472|M.vanbaalenii_PYR-1       FRIVGGIGVGVASVIAPAYIAETSPPG-IRGRLGSLQQLAIVSGIFASFA
MSMEG_4182|M.smegmatis_MC2_155      FRIVGGIGVGVASVIAPAYIAETSPPG-IRGRLGSLQQLAIVLGIFTSFV
TH_2640|M.thermoresistible__bu      --------------------------------------LAIVSGIFLSLL
MAB_0692c|M.abscessus_ATCC_199      FRVIGGVGVGVASLIAPAYIAETSPSR-IRGRLGSLQQLAIVTGIFLSLT
MLBr_01562|M.leprae_Br4923          ARLLQGIGSAIASPTGLALVATTFSKGSARNTATAVFAAMTAIGSVMGLV
                                                                               * . .  

Mb3364|M.bovis_AF2122/97            VGYLLAGSHG------------WRAMFGLAAAPATLLLPLLWRMP-----
Rv3331|M.tuberculosis_H37Rv         VGYLLAGSHG------------WRAMFGLAAAPATLLLPLLWRMP-----
MMAR_1191|M.marinum_M               TGYLLAGTHS------------WRWMLGLATVPAMLLLPLLIRMP-----
MUL_1444|M.ulcerans_Agy99           TGYLLAGTHS------------WRWMLGLATVPAMLLLPLLIRMP-----
MAV_4306|M.avium_104                SGYLLAGTHS------------WRWMLGLACVPAVLLLPLVFRMP-----
Mflv_3055|M.gilvum_PYR-GCK          VNYLLQWLAGGPNEPLWLGMDAWRWMFLAMAVPAVVYGGLAFTIP-----
Mvan_3472|M.vanbaalenii_PYR-1       VNWLLQWAAGGPNEPLWFGLDAWRWMFLAMALPAVLYGVLAFTIP-----
MSMEG_4182|M.smegmatis_MC2_155      VNWLLQWAAGGPNEVLAMGLDAWRWMFLAMAVPAVLYGALAFTIP-----
TH_2640|M.thermoresistible__bu      IDGILAALAGGSREELWLNMEAWRWMFLMMAVPAVLYGALTFTIP-----
MAB_0692c|M.abscessus_ATCC_199      IDWLLAHLAGSSRDELWLGLPAWRWMFLAMALPALVYGTLAFTIP-----
MLBr_01562|M.leprae_Br4923          VGGALTEVSWRLAFLVNVPIGLVMIYLARTALHETHKERMKLDAAGAILA
                                     .  *                     :            :    .     

Mb3364|M.bovis_AF2122/97            -DTARWYLLKGRIADARSALRRIQPEADIDAELADMAAAVDERGG----G
Rv3331|M.tuberculosis_H37Rv         -DTARWYLLKGRIADARSALRRIQPEADIDAELADMAAAVDERGG----G
MMAR_1191|M.marinum_M               -DTPRWYVMKGRIQEARAALLRVDPAADVEEELAEIGTALSEGSG----G
MUL_1444|M.ulcerans_Agy99           -DTPRWYVMKGRIQEARAALLRVDPAADVEEELAEIGTALSEGSG----G
MAV_4306|M.avium_104                -DTARWYLLKGRVDDARRALLRVEPAARVDDELAEIGRAVSEEAASLPAM
Mflv_3055|M.gilvum_PYR-GCK          -ESPRYLVATHKIPEARRVLSMLLGQKNLEITITRIRETLEREDRP---S
Mvan_3472|M.vanbaalenii_PYR-1       -ESPRYLVASHKIPEARRVLSMLLGKKNLEITITRIRETLEREDKP---S
MSMEG_4182|M.smegmatis_MC2_155      -ESPRYLVATHKIPEARRVLSMLLGQKNLEITITRIRDTLEREDKP---S
TH_2640|M.thermoresistible__bu      -ESPRYLVATHRVPEARRVLSRLLGAKNLEITINRIERSLRAEKPP---S
MAB_0692c|M.abscessus_ATCC_199      -ESPRYLVATHRIPEARTVLATLLGEKNLDITIGRIQETLDQSTAP---S
MLBr_01562|M.leprae_Br4923          TLACTAAVFAFSMGPEKGWISLTTIGSGLVALVAAIAFAVVERTAENPVV
                                      :    :    :   :  :        :   :  :  ::          

Mb3364|M.bovis_AF2122/97            IGEMVRRP--YLRATLFVIALGFLVQITG-----INAIIYYSPRLFAAMG
Rv3331|M.tuberculosis_H37Rv         IGEMVRRP--YLRATLFVIALGFLVQITG-----INAIIYYSPRLFAAMG
MMAR_1191|M.marinum_M               VSEMLRPP--FLRATIFVITLGFLIQITG-----INAIIYYSPRIFEAMG
MUL_1444|M.ulcerans_Agy99           VSEMLRPP--FLRATIFVITLGFLIQITG-----INAIIYYSPRIFEAMG
MAV_4306|M.avium_104                LAEMVRSP--YRRATVFVVVLGFLIQITG-----INAIIYYSPRIFEAMG
Mflv_3055|M.gilvum_PYR-GCK          WRDLKKPTGGIYGIVWVGLGLSIFQQFVG-----INVIFYYSNVLWQAVG
Mvan_3472|M.vanbaalenii_PYR-1       WRDMRKPTGGLYGIVWVGLGLSIFQQFVG-----INVIFYYSNVLWQAVG
MSMEG_4182|M.smegmatis_MC2_155      WRDLKKPTGGIYGIVWVGLGLSIFQQFVG-----INVIFYYSNVLWQAVG
TH_2640|M.thermoresistible__bu      WSDLRKPTGGMYGIVWVGLGLSIFQQFVG-----INVIFYYSNVLWEAVG
MAB_0692c|M.abscessus_ATCC_199      WRDLRKPTGGLHAIVWIGVALAVFQQLVG-----INVIFYYSNVLWQAVG
MLBr_01562|M.leprae_Br4923          PFDLFRDRNRLVTFIAIFLAGGVIFSLTVSIGLYIQDILGYS-ALRAGIG
                                      :: :          . :  ..: .:.      *: *: **  :  .:*

Mb3364|M.bovis_AF2122/97            FAGYFAMLALPAMVQVAGLAAVCASLFLVDR-LGRRPILLSGIATMITAD
Rv3331|M.tuberculosis_H37Rv         FAGYFAMLALPAMVQVAGLAAVCASLFLVDR-LGRRPILLSGIATMITAD
MMAR_1191|M.marinum_M               FTGDFALLGLPALVQIAGVAAVITSLLLVDR-VGRRPILLSGIAIMIVAD
MUL_1444|M.ulcerans_Agy99           FTGDFALLGLPALVQIAGVAAVITSLLLVDR-VGRRPILLSGIAIMIVAD
MAV_4306|M.avium_104                FTGNFALLALPALVQVAGLVAVGTALLLVDR-VGRRPILLCGTAMMIVAD
Mflv_3055|M.gilvum_PYR-GCK          FS-ADESAVYTVITSVVNVLTTLIAIALIDK-IGRKPLLLIGSVGMAVTL
Mvan_3472|M.vanbaalenii_PYR-1       FS-ADESAVYTVITSVINVLTTLIAIALIDK-IGRKPLLLIGSSGMAVTL
MSMEG_4182|M.smegmatis_MC2_155      FS-ADQSAIYTVITSVVNVLTTLIAIALIDK-IGRKPLLLIGSSGMAVTL
TH_2640|M.thermoresistible__bu      FD-ESQSFLITVITSVTNIVTTLIAIALIDK-IGRKPLLLIGSTGMAGTL
MAB_0692c|M.abscessus_ATCC_199      FG-ESSSFTITVITSITNIATTLVAIALIDR-VGRKPLLLIGSAGMAATL
MLBr_01562|M.leprae_Br4923          FIPFVIAMGIGLGVSSQLVSRFSPRVLTIGGGWLLMVAMLYGWAFMNRGV
                                    *            ..   :      :  :.        :* *   *    

Mb3364|M.bovis_AF2122/97            AVLITVFANDSD------------GGTGLVLGFAGVLLFIIGFN-FGFGS
Rv3331|M.tuberculosis_H37Rv         AVLITVFANDSD------------GGTGLVLGFAGVLLFIIGFN-FGFGS
MMAR_1191|M.marinum_M               VALMAVFAR---------------GQGAAILGFAGILLFIIGYT-MGFGS
MUL_1444|M.ulcerans_Agy99           VALMAVFAR---------------GQGAAILGFAGILLFIIGYT-MGFGS
MAV_4306|M.avium_104                VVLVAVFGR---------------GPGGVIAGFAGVLLFIFGYT-MGFGS
Mflv_3055|M.gilvum_PYR-GCK          STMAFIFANAELIENEAGEMVPSLPGASGVIALIAANLFVVAFG-MSWGP
Mvan_3472|M.vanbaalenii_PYR-1       ITMAVIFANATVGADGN----PSLPGASGVIALIAANLFVVAFG-MSWGP
MSMEG_4182|M.smegmatis_MC2_155      ATMAVIFANATVKPDGT----PDLPGASGLIALIAANLFVVAFG-MSWGP
TH_2640|M.thermoresistible__bu      GVMAVIFGTAPVIDGQ-----PQLGDVAGPVALVAANLFVVSFG-MSWGP
MAB_0692c|M.abscessus_ATCC_199      GTMAVIFGSATMVDGK-----PHLGPVAGPVALVAANLFVVAFG-MSWGP
MLBr_01562|M.leprae_Br4923          PYFPNLLAPIVVGG---------IGIGMAVVPLTLSAIAGVGFDRIGPVS
                                      :  ::.                        :    :  ..:  :.  .

Mb3364|M.bovis_AF2122/97            LVWVYAAESFPSRLRSMGSSLMLTSTLTANAIVAAFSLTMLRVLGGAGVF
Rv3331|M.tuberculosis_H37Rv         LVWVYAAESFPSRLRSMGSSPMLTSTLTANAIVAAFSLTMLRVLGGAGVF
MMAR_1191|M.marinum_M               LGWVYASESFPTRLRSIGSSTMLTANLIANAIVAGVFLTMLHSLGGSGAF
MUL_1444|M.ulcerans_Agy99           LGWVYASESFPTRLRSIGSSTMLTANLIANAIVAAVFLTMLHSLGGSGAF
MAV_4306|M.avium_104                LGWVYASESFPSRLRSIGSSTMLTSNLVANAIVAAVFLTLLHSLGGAGTF
Mflv_3055|M.gilvum_PYR-GCK          VVWVLLGEMFPNRIRAAALGLAAAGQWTANWVITVSFPELRNFLG--AAY
Mvan_3472|M.vanbaalenii_PYR-1       VVWVLLGEMFPNRIRAAALGLAAAGQWAANWLITVTFPGLREHLG--LAY
MSMEG_4182|M.smegmatis_MC2_155      VVWVLLGEMFPNRFRAAALGLAAAGQWAANWLITVSFPELRNHLG--LAY
TH_2640|M.thermoresistible__bu      VVWVLLGEMFPNRIRAAALGLAAAGQWTANWVITVTFPGLREHLG--PAY
MAB_0692c|M.abscessus_ATCC_199      VVWVLLGEIFPNRIRAAAMGLATAGNWAANWAVTVTFPALRDALG--IAY
MLBr_01562|M.leprae_Br4923          AIALMLQSLGGPLVLAVIQAVITSRTLYLGGTTGPVKFMNDAQLRALDHG
                                       :   .     . :   .   :     .             *      

Mb3364|M.bovis_AF2122/97            AVFGTFAVVAFVVVYRFAPETKGRKLEEIRHFWENGGRWPAERSPAADEP
Rv3331|M.tuberculosis_H37Rv         AVFGTFAVVAFVVVYRFAPETKGRKLEEIRHFWENGGRWPAERSPAADEP
MMAR_1191|M.marinum_M               AVFGVLALVAFGVVYRYAPETKGRQLEEIRHFWENGGRWPEKLTEAP---
MUL_1444|M.ulcerans_Agy99           AVFGVLALVAFGVVYRYAPETKGRQLEEIRHFWENGGRWPEKLTEAP---
MAV_4306|M.avium_104                AVFAVLAVVAFAFVHRYAPETKGRQLEDIRHFWENGGRWD----------
Mflv_3055|M.gilvum_PYR-GCK          GFYALCAVLSGLFVWKWVRETKGVSLEDMHGEILHGDKSATG--------
Mvan_3472|M.vanbaalenii_PYR-1       GFYGLCAVLSGLFVWRWVMETKGVSLEDMHGEILHADKTATG--------
MSMEG_4182|M.smegmatis_MC2_155      GFYALCAVLSFLFVSKWVEETRGKNLEDMHAEALGH--------------
TH_2640|M.thermoresistible__bu      GFYALCAVLSLLFVWRWVAETKGRTLEDMQPDVPGHDRASAPG-------
MAB_0692c|M.abscessus_ATCC_199      GCYALCAVLSLLFVARWVEETKGRALEDMDSAIS----------------
MLBr_01562|M.leprae_Br4923          YTYGLLWVAGAVVIVGVAALFIGYTPEQVAYAQEVKEAVDAGEL------
                                      :.   : .  .:   .    *   *::