For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSIRTRRRIAILAGTLTVTALFAVGCQSSTEQEPSPPSTTTTTTTTTTTPAPTTTPAPPAPTEKGLSPTG GNLFTPEVKAPPAPTEPPGVHRHKN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3965 | - | - | 100% (95) | hypothetical protein MSMEG_3965 |
M. smegmatis MC2 155 | MSMEG_4413 | - | 1e-19 | 56.25% (80) | hypothetical protein MSMEG_4413 |
M. smegmatis MC2 155 | MSMEG_1618 | - | 7e-19 | 51.16% (86) | hypothetical protein MSMEG_1618 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0018c | ppp | 2e-07 | 33.33% (93) | serine/threonine phosphatase |
M. gilvum PYR-GCK | Mflv_0276 | - | 1e-07 | 42.11% (57) | hypothetical protein Mflv_0276 |
M. tuberculosis H37Rv | Rv0018c | ppp | 2e-07 | 33.33% (93) | serine/threonine phosphatase |
M. leprae Br4923 | MLBr_01099 | - | 2e-05 | 34.21% (76) | putative lipoprotein |
M. abscessus ATCC 19977 | MAB_3220 | - | 6e-08 | 37.63% (93) | hypothetical protein MAB_3220 |
M. marinum M | MMAR_0619 | - | 1e-08 | 40.48% (84) | hypothetical protein MMAR_0619 |
M. avium 104 | MAV_4004 | - | 1e-06 | 36.36% (77) | hypothetical protein MAV_4004 |
M. thermoresistible (build 8) | TH_2661 | - | 5e-08 | 41.98% (81) | PUTATIVE - |
M. ulcerans Agy99 | MUL_0584 | - | 3e-08 | 39.29% (84) | hypothetical protein MUL_0584 |
M. vanbaalenii PYR-1 | Mvan_0621 | - | 1e-08 | 35.16% (91) | hypothetical protein Mvan_0621 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0018c|M.bovis_AF2122/97 MALVTLVLRYAARSDRGLVRANNEDSVYAGARLLALADGMGGHAAGEVAS Rv0018c|M.tuberculosis_H37Rv MARVTLVLRYAARSDRGLVRANNEDSVYAGARLLALADGMGGHAAGEVAS MAV_4004|M.avium_104 -------------------------------------------------- TH_2661|M.thermoresistible__bu -------------------------------------------------- Mflv_0276|M.gilvum_PYR-GCK ---MTEPLGLSIGTTNLVAARVGRPPVTRRAILTLVAGQAPQVGTPEENA Mvan_0621|M.vanbaalenii_PYR-1 ---MTEPLGLSIGMTNLVAARVGRPPVTRRSILNLYTDRAPEVGAPSEIP MMAR_0619|M.marinum_M -------------------------------------------------- MUL_0584|M.ulcerans_Agy99 -------------------------------------------------- MSMEG_3965|M.smegmatis_MC2_155 -------------------------------------------------- MAB_3220|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01099|M.leprae_Br4923 -------------------------------------------------- Mb0018c|M.bovis_AF2122/97 QLVIAALAHLDDDEPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTT Rv0018c|M.tuberculosis_H37Rv QLVIAALAHLDDDEPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTT MAV_4004|M.avium_104 -------------------------------------------------- TH_2661|M.thermoresistible__bu -------------------------------------------------- Mflv_0276|M.gilvum_PYR-GCK GNNPSGVVLTGFVDRVGDPVPLIAEDGSAHRGEQVLAAALDAMARLVDGG Mvan_0621|M.vanbaalenii_PYR-1 GFSQPRLVLSGFVERVGDPVPLVAADGSAHRGEQTLAQALDAMAGLVDGG MMAR_0619|M.marinum_M -------------------------------------------------- MUL_0584|M.ulcerans_Agy99 -------------------------------------------------- MSMEG_3965|M.smegmatis_MC2_155 -------------------------------------------------- MAB_3220|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01099|M.leprae_Br4923 -------------------------------------------------- Mb0018c|M.bovis_AF2122/97 LTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITP Rv0018c|M.tuberculosis_H37Rv LTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITP MAV_4004|M.avium_104 -------------------------------------------------- TH_2661|M.thermoresistible__bu -------------------------------------------------- Mflv_0276|M.gilvum_PYR-GCK SPVAIAVPSHWGPGTVGALRGALRTVPSLSPGGVPATLIPDSTAALASLR Mvan_0621|M.vanbaalenii_PYR-1 APVAIAVPAHWGPGTVGALRGALRAAPRLSPNGIPPALIPDATAALAALR MMAR_0619|M.marinum_M -------------------------------------------------- MUL_0584|M.ulcerans_Agy99 -------------------------------------------------- MSMEG_3965|M.smegmatis_MC2_155 -------------------------------------------------- MAB_3220|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01099|M.leprae_Br4923 -------------------------------------------------- Mb0018c|M.bovis_AF2122/97 EEAHSHPQRSLIMRALTGHEVEPTLTMREARAG-----DRYLLCSDGLSD Rv0018c|M.tuberculosis_H37Rv EEAHSHPQRSLIMRALTGHEVEPTLTMREARAG-----DRYLLCSDGLSD MAV_4004|M.avium_104 -------------------------------------------------- TH_2661|M.thermoresistible__bu -------------------------------------------------- Mflv_0276|M.gilvum_PYR-GCK VSPGLPGSGVVVLVDLGGSGSSVTLADAGANLVVVGQTVRYPEFSGDGID Mvan_0621|M.vanbaalenii_PYR-1 VTPGLPSQGVVVLVDLGGSGSSITLADAGSGAATIGQTVRYPDFSGEAID MMAR_0619|M.marinum_M -------------------------------------------------- MUL_0584|M.ulcerans_Agy99 -------------------------------------------------- MSMEG_3965|M.smegmatis_MC2_155 -------------------------------------------------- MAB_3220|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01099|M.leprae_Br4923 -------------------------------------------------- Mb0018c|M.bovis_AF2122/97 PVSDETILEALQIPEVAESAHRLIELALRGGGPDNVTVVVADVVDYDYGQ Rv0018c|M.tuberculosis_H37Rv PVSDETILEALQIPEVAESAHRLIELALRGGGPDNVTVVVADVVDYDYGQ MAV_4004|M.avium_104 -------------------------------------------------- TH_2661|M.thermoresistible__bu -------------------------------------------------- Mflv_0276|M.gilvum_PYR-GCK RALLDHVLAGVSDTGQAD---TAGTAAVGPLMRLREECRAAKERLSSETA Mvan_0621|M.vanbaalenii_PYR-1 QALLGHVLTGIADADTADPAGTAGTAAVGPLSRLRDECRAAKERLSGETA MMAR_0619|M.marinum_M -------------------------------------------------- MUL_0584|M.ulcerans_Agy99 -------------------------------------------------- MSMEG_3965|M.smegmatis_MC2_155 -------------------------------------------------- MAB_3220|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01099|M.leprae_Br4923 -------------------------------------------------- Mb0018c|M.bovis_AF2122/97 TQPILAGAVSGDDDQLTLPN----TAAGRASAISQRKEIVKRVPPQADTF Rv0018c|M.tuberculosis_H37Rv TQPILAGAVSGDDDQLTLPN----TAAGRASAISQRKEIVKRVPPQADTF MAV_4004|M.avium_104 --------------------------------MKFTLNILEKRGNDDDTE TH_2661|M.thermoresistible__bu --------------------------------------MPDRR------- Mflv_0276|M.gilvum_PYR-GCK TAVPVDLPGFRSEVRVTRPELEQMIAGPLDGLLSLIDDTLTRNGVATENI Mvan_0621|M.vanbaalenii_PYR-1 TAVPVELPGFSSDVRVTRPELEQLISEPLTGLLSAIDDVLQRNGIAAGDV MMAR_0619|M.marinum_M ---------------------------------------MARYGPPDDFH MUL_0584|M.ulcerans_Agy99 ---------------------------------------MARYGPPDDFH MSMEG_3965|M.smegmatis_MC2_155 -------------------------------------------------- MAB_3220|M.abscessus_ATCC_1997 -----------------------------------MQDSRQRKKQDQRSP MLBr_01099|M.leprae_Br4923 --------------MRDVWSLPCRKSLLGVAAVVLVSGTLTGCSSGDSTV Mb0018c|M.bovis_AF2122/97 SRPRWSGRR---LAFVVALVTVLMTAGLLIGRAIIRSNYYVADYAGSVSI Rv0018c|M.tuberculosis_H37Rv SRPRWSGRR---LAFVVALVTVLMTAGLLIGRAIIRSNYYVADYAGSVSI MAV_4004|M.avium_104 AEHRWPQY---------VFGGRMRTSTFVLIVAFLLVWWVYDTYRPEPAP TH_2661|M.thermoresistible__bu --LRIPGR---------LFGGRIRTSTVALIAAFIGLVWLDQVYEPPPPP Mflv_0276|M.gilvum_PYR-GCK SAIATVGGGAAIPLVTQRLSERLRAPVVTTPQALLNIGAGAALIANQTLD Mvan_0621|M.vanbaalenii_PYR-1 SAVATVGGGAAIPLVTQRLSERLRAPVVTTPEPALNVAAGAALVANQSLA MMAR_0619|M.marinum_M SQPTQYGG----------YPAGGRPPAGPPPSRPAGPQSGPPPQAPPGPD MUL_0584|M.ulcerans_Agy99 SQPTQYGG----------YPAGGRPPAGAPPSRPAGPQSGPPPQAPPGPD MSMEG_3965|M.smegmatis_MC2_155 ------------------MSIRTRRRIAILAGTLTVTALFAVGCQSSTEQ MAB_3220|M.abscessus_ATCC_1997 THLTREHP----------MKTRTVKPAKVFAGCAIALGAALAGCGTNNDG MLBr_01099|M.leprae_Br4923 AKTPVPPS-----------TTTGTISTIISSAPSPPFATAAPPTSNTPPD Mb0018c|M.bovis_AF2122/97 MRGIQGSLLG---------------------------------------- Rv0018c|M.tuberculosis_H37Rv MRGIQGSLLG---------------------------------------- MAV_4004|M.avium_104 KPP----------------------------------------------- TH_2661|M.thermoresistible__bu EP------------------------------------------------ Mflv_0276|M.gilvum_PYR-GCK ADAPTGMAPTGMAAAADVPTAMGPAVDAPTALGPAAPPVAGG-------- Mvan_0621|M.vanbaalenii_PYR-1 TDAPTGMAP-----AADAPTAMGHAAWAAGAAGLAATESAGDGASSATFR MMAR_0619|M.marinum_M SLSPS--------------------------------------------- MUL_0584|M.ulcerans_Agy99 SPNPS--------------------------------------------- MSMEG_3965|M.smegmatis_MC2_155 EP------------------------------------------------ MAB_3220|M.abscessus_ATCC_1997 GP------------------------------------------------ MLBr_01099|M.leprae_Br4923 DPCAVN-------------------------------------------- Mb0018c|M.bovis_AF2122/97 -----------MSLHQPYLMGCLSPRNELSQISYGQSGGPLDCHLMKLED Rv0018c|M.tuberculosis_H37Rv -----------MSLHQPYLMGCLSPRNELSQISYGQSGGPLDCHLMKLED MAV_4004|M.avium_104 -------------------AQQVVPPGFVPDPNYTW-------------- TH_2661|M.thermoresistible__bu -------------------VQQWVPPGFVPNPDYTW-------------- Mflv_0276|M.gilvum_PYR-GCK ALAWSQDDDGVQDPLPYTGADYTSPAGYGDAATGARPPVAFAPGDDGYSD Mvan_0621|M.vanbaalenii_PYR-1 ALAWSQDDDAAGDPLPYTGEDYTVAGGYADPGTAARPSVDFAGQDDTYTD MMAR_0619|M.marinum_M -------------------EQFASAEGYDQEKPESE-------------- MUL_0584|M.ulcerans_Agy99 -------------------VQFASAEGYDQEKPEAE-------------- MSMEG_3965|M.smegmatis_MC2_155 -------------------------------------------------- MAB_3220|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01099|M.leprae_Br4923 ------------------LASPTIARVVSELPRDPR-------------- Mb0018c|M.bovis_AF2122/97 LRPPERAQVRAGLPAGTLDDAIGQLR------------------------ Rv0018c|M.tuberculosis_H37Rv LRPPERAQVRAGLPAGTLDDAIGQLR------------------------ MAV_4004|M.avium_104 --VPRSRLQQPPAT------------------------------------ TH_2661|M.thermoresistible__bu --VPRTAVRRPPTTE----------------------------------- Mflv_0276|M.gilvum_PYR-GCK DLPPLPWYKRPPVLFGLAAAAALLAVGGLAVTLTSSEG-STTVTETASTT Mvan_0621|M.vanbaalenii_PYR-1 ELAPLPWYKRPPVLFGVAAAAALLAAGGLAVTLTGSQGDSGTVTETAS-- MMAR_0619|M.marinum_M ---PKPWYRNPVTLTGWALLVMILIA------------------------ MUL_0584|M.ulcerans_Agy99 ---PKPWYRNPVTLTGWALLVMILIA------------------------ MSMEG_3965|M.smegmatis_MC2_155 ---------SPPS------------------------------------- MAB_3220|M.abscessus_ATCC_1997 ----TSTSTTTTTT------------------------------------ MLBr_01099|M.leprae_Br4923 --SAQPWNPEPLAG------------------------------------ . Mb0018c|M.bovis_AF2122/97 -----------------ELAANSLLPPCPAPRATSPPGRPAPPTTSETTE Rv0018c|M.tuberculosis_H37Rv -----------------ELAANSLLPPCPAPRATSPPGRPAPPTTSETTE MAV_4004|M.avium_104 ----------------------VTYTPTPTSTPPPPPP---PPPVTTT-- TH_2661|M.thermoresistible__bu --------------------SEPTTTTTTTTTPPADTPTTTPPAVTTPEE Mflv_0276|M.gilvum_PYR-GCK APSDTTPVELPPPVTTVTIGPDGVATTTVSQPPPPPPSSTSSTTTTTPSS Mvan_0621|M.vanbaalenii_PYR-1 VPTETPPAELPPPVTTVTVGADGIATTTVSQPPPPPPSSSTTTPTTASTT MMAR_0619|M.marinum_M ------------------LIVYGIIELISDRQGTGNPSTTTPSTTTSTTT MUL_0584|M.ulcerans_Agy99 ------------------LIVYGIIELISDRQGTGNPSTTTPSTTTSTTT MSMEG_3965|M.smegmatis_MC2_155 ----------------------TTTTTTTTTTTPAPTTTPAPPAPTEKG- MAB_3220|M.abscessus_ATCC_1997 ----------------------TTTTTTITPAPSGAPEGTPAPGPTGGGG MLBr_01099|M.leprae_Br4923 ----------------------NYNECAQLSAVIIKANTNAVNPTTRAVL . : Mb0018c|M.bovis_AF2122/97 PNVTSSPAAPSPTTSASAPTG------TTPAIPTSASPAAPASPPTPWPV Rv0018c|M.tuberculosis_H37Rv PNVTSSPASPSPTTSAPAPTG------TTPAIPTSASPAAPASPPTPWPV MAV_4004|M.avium_104 -TTTTTTP--PFQLP---------------KLP--CILPAPFCPP--STT TH_2661|M.thermoresistible__bu PTTTVIDPDGPGLLPPTT--------VTETDRPDLGAPPTPWGPP--TTT Mflv_0276|M.gilvum_PYR-GCK STTTTTTTTTTTTTTTTNTAPTTTTTRTTTAPPTTTPPPTTTQAPPPPTT Mvan_0621|M.vanbaalenii_PYR-1 SPTTTTTTTTTTTTTTT-----TTTTRTTTTQPTTTAPPTTTQPPPPTTT MMAR_0619|M.marinum_M AETTTTTPPTTTTTTVAP----------ATTPRVQPPPQQPTHPPTHRFP MUL_0584|M.ulcerans_Agy99 AETATTTPPTTTTTTVAP----------ATTPRVQPPPQQPTHPPTHRFP MSMEG_3965|M.smegmatis_MC2_155 -----LSPTGGNLFT-----------------PEVKAPPAPTEPPGVHRH MAB_3220|M.abscessus_ATCC_1997 PDGGSGAIPGGPTGGGGP----------EGGSGSIPGGPTGGGGPEGGGG MLBr_01099|M.leprae_Br4923 FHLGRFIPQGVPDTYGFN----------GIDPAQTTGDTVALTYPSSIDG * Mb0018c|M.bovis_AF2122/97 TSSPTMAALPPPPPQPGIDCRAAA---- Rv0018c|M.tuberculosis_H37Rv TSSPTMAALPPPPPQPGIDCRAAA---- MAV_4004|M.avium_104 PSTPAPEQPQPGPGPTPTSPPPAS---- TH_2661|M.thermoresistible__bu TAPAFGPGQQPQNQPPGAARPPGG---- Mflv_0276|M.gilvum_PYR-GCK EEPPP-TVDPPDPIVTT-VIPDGGA--- Mvan_0621|M.vanbaalenii_PYR-1 AAPPPTTVDPPDPVTTTVIIPEDGA--- MMAR_0619|M.marinum_M HLPPLPSVITIPGVPTTITLPPHLP--- MUL_0584|M.ulcerans_Agy99 HLPPLPSVITIPGVPTTITLPPHLP--- MSMEG_3965|M.smegmatis_MC2_155 KN-------------------------- MAB_3220|M.abscessus_ATCC_1997 HIPGVGGGHGGPGGGGGCVDNVGCVSIP MLBr_01099|M.leprae_Br4923 LATAVRFHWNGNAVELISNIAGG-----