For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVAEPNPVPPAATARSAPRHIRLTSHHGAEGALAIRWGAPTAAERGPLIGTTTTRAHRNVIGTHSGSYSV YRALAVASGALSPEHRADLTNTAPTDVIGPYAQWSDPSAIVSLDPWGAMVAEAFTTELAAGFDIRPTIAI TKAHVILPEIADAIAKGRLQPDGRILLPNGAALVTKAAIEPVWYLPGVAARFGCSETTLRRVLFEETGGM YPELVTRSDLEVFLPPIGGQTLYIFGNARDLADSSVELTARVHDECNGSDVFGSDICTCRPYLTHAIEEC IRGAQRGGVGLVAYSRKEGRALGEVTKFLVYNARKRQAGGDTADQYFARTECVAGVQDMRFQELMPDVLH WLGIRKIHRLVSMSNMKYDAIVGSGIEVGERINIPEELIPADARVEIDAKMAAGYFTPGPVPDAEELKIA KGRELA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3471 | - | - | 100% (426) | hypothetical protein MSMEG_3471 |
M. smegmatis MC2 155 | MSMEG_3072 | - | 5e-09 | 33.57% (140) | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1450 | ribA2 | 2e-09 | 32.86% (140) | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate |
M. gilvum PYR-GCK | Mflv_3257 | - | 0.0 | 84.48% (406) | hypothetical protein Mflv_3257 |
M. tuberculosis H37Rv | Rv1415 | ribA2 | 2e-09 | 32.86% (140) | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate |
M. leprae Br4923 | MLBr_00559 | ribA | 2e-09 | 32.14% (140) | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate |
M. abscessus ATCC 19977 | MAB_2796c | - | 2e-09 | 32.86% (140) | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP |
M. marinum M | MMAR_2222 | ribA2 | 5e-09 | 32.86% (140) | riboflavin biosynthesis protein RibA2 |
M. avium 104 | MAV_3365 | - | 3e-09 | 32.86% (140) | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP |
M. thermoresistible (build 8) | TH_0344 | ribA2 | 1e-09 | 27.04% (233) | PROBABLE RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA2 : GTP |
M. ulcerans Agy99 | MUL_1809 | ribA2 | 3e-08 | 32.14% (140) | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate |
M. vanbaalenii PYR-1 | Mvan_2974 | - | 0.0 | 82.54% (418) | hypothetical protein Mvan_2974 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2222|M.marinum_M -------------------------------------------------- MUL_1809|M.ulcerans_Agy99 -------------------------------------------------- MAV_3365|M.avium_104 -------------------------------------------------- Mb1450|M.bovis_AF2122/97 -------------------------------------------------- Rv1415|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00559|M.leprae_Br4923 -----------------------------------------------MGP MAB_2796c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_3257|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2974|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_3471|M.smegmatis_MC2_155 -------------------------------------------------- TH_0344|M.thermoresistible__bu VATAHGSGVVAGGLARPGDDDYWRRCAAGGAAMVIAGGTVVSPDSANRTG MMAR_2222|M.marinum_M -------MTRLDSVERAVADIGAGKAVIVID--DEDRENEGDLIFAAEKA MUL_1809|M.ulcerans_Agy99 -------MTRLDSVERAVADIGAGKAVIVID--DEDRENEGDLIFAAEKA MAV_3365|M.avium_104 -------MTRLDSVERAVADIAAGKAVIVID--DEDRENEGDLIFAAEKA Mb1450|M.bovis_AF2122/97 -------MTRLDSVERAVADIAAGKAVIVID--DEDRENEGDLIFAAEKA Rv1415|M.tuberculosis_H37Rv -------MTRLDSVERAVADIAAGKAVIVID--DEDRENEGDLIFAAEKA MLBr_00559|M.leprae_Br4923 FDSKVAKMTRLDSVERAVADIAAGKAVVVID--DEDRENEGDLIFAAEKA MAB_2796c|M.abscessus_ATCC_199 -------MTRLDSIERAVADIAAGKAVVVVD--DEDRENEGDLIFAAEKA Mflv_3257|M.gilvum_PYR-GCK -------------------MPGG--HIRLTS--HSGGADAPALQWGAATA Mvan_2974|M.vanbaalenii_PYR-1 --------MSTDAVPPPAKPPGG--HIRLTS--HSAGSDAPALRWGAPTA MSMEG_3471|M.smegmatis_MC2_155 ------MVAEPNPVPPAATARSAPRHIRLTS--HHGAEGALAIRWGAPTA TH_0344|M.thermoresistible__bu NITEAWRPEAVDGLRRRASAIAREGAVPVCQLVHLGRETLGAEIWEHPVA . : : . . : * MMAR_2222|M.marinum_M TP------------------------ELVAFMVRYTSGYLCVP-LDGAVC MUL_1809|M.ulcerans_Agy99 TP------------------------ELVAFMVRYTSGYLCVP-LDGAVC MAV_3365|M.avium_104 TP------------------------EMVAFMVRYTSGYLCVP-LDGAIC Mb1450|M.bovis_AF2122/97 TP------------------------EMVAFMVRYTSGYLCVP-LDGAIC Rv1415|M.tuberculosis_H37Rv TP------------------------EMVAFMVRYTSGYLCVP-LDGAIC MLBr_00559|M.leprae_Br4923 TL------------------------EMVAFMVRYTSGYLCAP-LDGAIC MAB_2796c|M.abscessus_ATCC_199 TP------------------------ELVAFMVRYTSGYLCVP-LAGEDC Mflv_3257|M.gilvum_PYR-GCK AE------------------------RGPVVGTTTTRGHRNVIGTHSGAY Mvan_2974|M.vanbaalenii_PYR-1 AE------------------------RGPLVGTTTKRAHRNVIGTHSGAY MSMEG_3471|M.smegmatis_MC2_155 AE------------------------RGPLIGTTTTRAHRNVIGTHSGSY TH_0344|M.thermoresistible__bu PSPVRSPREPVRARTMSESDIDRVIDDFVVSSRHAAEAGFRAVELHAAHG . . . . MMAR_2222|M.marinum_M DRLGLLPMYAVNQDKHGT-------------AYTVTVDAKNGVGTGISAS MUL_1809|M.ulcerans_Agy99 DRLGLLPMYAVNQDKHGT-------------AYTVTVDAKNGVGTGISAS MAV_3365|M.avium_104 DRLGLLPMYAVNQDKHGT-------------AYTVTVDARNGVGTGISAS Mb1450|M.bovis_AF2122/97 DRLGLLPMYAVNQDKHGT-------------AYTVTVDARNGIGTGISAS Rv1415|M.tuberculosis_H37Rv DRLGLLPMYAVNQDKHGT-------------AYTVTVDARNGIGTGISAS MLBr_00559|M.leprae_Br4923 DRLGLLPMFAVNQDKHGT-------------AYTVTVDARNGVGTGISAS MAB_2796c|M.abscessus_ATCC_199 DRLGLLPQYAVNQDKHGT-------------AYTVTVDAKNGIGTGISAS Mflv_3257|M.gilvum_PYR-GCK GVYRALAVAAGALSREHR-------------ADLTNTSPTDVIGPYPQWA Mvan_2974|M.vanbaalenii_PYR-1 GVYRALAVAAGKLSREHR-------------ADLTNTAPTDIIGPHPQWA MSMEG_3471|M.smegmatis_MC2_155 SVYRALAVASGALSPEHR-------------ADLTNTAPTDVIGPYAQWS TH_0344|M.thermoresistible__bu YLLGQFLSPAINRRPDAQNTAGRVRILHRLRSAIVEACPDLVVGVRVSVE : : . : . . . :* . MMAR_2222|M.marinum_M DRA---------------------TTMRLLADPASVAEDFTRPGHVVPLR MUL_1809|M.ulcerans_Agy99 DRA---------------------TTMRLLADPASVAEDFTRPGHVVPLR MAV_3365|M.avium_104 DRA---------------------TTMRLLADPTSIAEDFTRPGHVVPLR Mb1450|M.bovis_AF2122/97 DRA---------------------TTMRLLADPTSVADDFTRPGHVVPLR Rv1415|M.tuberculosis_H37Rv DRA---------------------TTMRLLADPTSVADDFTRPGHVVPLR MLBr_00559|M.leprae_Br4923 DRA---------------------TTMRLLADPASVADDFTRPGHVVPLR MAB_2796c|M.abscessus_ATCC_199 DRA---------------------ATMRLLADAASTADDFTKPGHVVPLR Mflv_3257|M.gilvum_PYR-GCK DPE---------------------TIVSLDPWGAMVADAFRG-------- Mvan_2974|M.vanbaalenii_PYR-1 DPE---------------------TIVSLDPWGAMVADVFAR-------- MSMEG_3471|M.smegmatis_MC2_155 DPS---------------------AIVSLDPWGAMVAEAFTT-------- TH_0344|M.thermoresistible__bu DADEGDLGLDRVCEILPLLEPFDYLNVTVGVRTTYVRDMATAAPPLLPHI * : : : : MMAR_2222|M.marinum_M AKDGGVLRRPGHTEAAVDLARMAG-------------------------- MUL_1809|M.ulcerans_Agy99 AKDGGVLRRPGHTEAAVDLARMAG-------------------------- MAV_3365|M.avium_104 AKDGGVLRRPGHTEAAVDLARMAG-------------------------- Mb1450|M.bovis_AF2122/97 AKDGGVLRRPGHTEAAVDLARMAG-------------------------- Rv1415|M.tuberculosis_H37Rv AKDGGVLRRPGHTEAAVDLARMAG-------------------------- MLBr_00559|M.leprae_Br4923 AKDGGVLRRPGHTEAAVDLARLAG-------------------------- MAB_2796c|M.abscessus_ATCC_199 AKDGGVLRRPGHTEASVDLAKLAG-------------------------- Mflv_3257|M.gilvum_PYR-GCK QIADGVDIRP---TIAVTKAQVIL-------------------------- Mvan_2974|M.vanbaalenii_PYR-1 EIADGVDIRP---TIAVTKAQVIL-------------------------- MSMEG_3471|M.smegmatis_MC2_155 ELAAGFDIRP---TIAITKAHVIL-------------------------- TH_0344|M.thermoresistible__bu ERLRGATSKPLLVSQAFRSRDDIESALHRGADLIGLARPLIADPELPRKL * :* :. MMAR_2222|M.marinum_M --------------------------------LQPAGAICEIVSQKDEGS MUL_1809|M.ulcerans_Agy99 --------------------------------LQPAGAICEIVSRKDEGS MAV_3365|M.avium_104 --------------------------------LQPAGAICEIVSQKDEGS Mb1450|M.bovis_AF2122/97 --------------------------------LQPAGAICEIVSQKDEGS Rv1415|M.tuberculosis_H37Rv --------------------------------LQPAGAICEIVSQKDEGS MLBr_00559|M.leprae_Br4923 --------------------------------LQPAGAICEIVSQKDEGS MAB_2796c|M.abscessus_ATCC_199 --------------------------------LRPAAVICEIVSQKDEGA Mflv_3257|M.gilvum_PYR-GCK --------------------------------PEVHDALARGRLTPD-GR Mvan_2974|M.vanbaalenii_PYR-1 --------------------------------PEVHDAIGKARLIPD-GR MSMEG_3471|M.smegmatis_MC2_155 --------------------------------PEIADAIAKGRLQPD-GR TH_0344|M.thermoresistible__bu ISGADSRIRPCVSCNEDCRSFTPVLLCTVNPTLAPPGQSARPATPLRFGT . * MMAR_2222|M.marinum_M MAQTDELRVFADEHGLALITIADLIEWRRKHEKH-IERVAEARIPTRHGE MUL_1809|M.ulcerans_Agy99 MAQTDELRVFADEHGLALITIADLIEWRRKHEKH-IERVAEARIPTRRGE MAV_3365|M.avium_104 MAQTDELRVFADEHDLAMITIADLIEWRRKHEKH-IERIAEARIPTRHGE Mb1450|M.bovis_AF2122/97 MAHTDELRVFADEHGLALITIADLIEWRRKHEKH-IERVAEARIPTRHGE Rv1415|M.tuberculosis_H37Rv MAHTDELRVFADEHGLALITIADLIEWRRKHEKH-IERVAEARIPTRHGE MLBr_00559|M.leprae_Br4923 MAQTDELRVFADEHDLALITIADLIAWRRKHEKH-IERVAEARIPTRHGE MAB_2796c|M.abscessus_ATCC_199 MAQTEELRVFADEHNLALVSIADLIEWRRKHEKH-VQRIAEARIPTQHGE Mflv_3257|M.gilvum_PYR-GCK VLLSTGAAQVTKAAIEPVWHLPGVARRFGCSESD-LRRVLFEETGGMYPE Mvan_2974|M.vanbaalenii_PYR-1 VLLGNGAAQVTKAAIEPVWYLPGVARRFGCSETD-LRRALFEETGGMYPE MSMEG_3471|M.smegmatis_MC2_155 ILLPNGAALVTKAAIEPVWYLPGVAARFGCSETT-LRRVLFEETGGMYPE TH_0344|M.thermoresistible__bu APGTPARVAVVGAGPAGLEXXXGAPGLVGAAQPGGVRRTGIAEIPTRHGS .. : . : :.* . . MMAR_2222|M.marinum_M FRAIGYTSIYED--VEHVALVRGEIAGPNSDGDDVLVRVHSECLTGDVFG MUL_1809|M.ulcerans_Agy99 FRAIGYTSIYEN--VEHVALVRGEIAGPNSDGDDVLVRVHSECLTGDVFG MAV_3365|M.avium_104 FRAIGYTSIYEE--VEHVALVRGEIAGPNSDGDDVLVRVHSECLTGDVFG Mb1450|M.bovis_AF2122/97 FRAIGYTSIYED--VEHVALVRGEIAGPNADGDDVLVRVHSECLTGDVFG Rv1415|M.tuberculosis_H37Rv FRAIGYTSIYED--VEHVALVRGEIAGPNADGDDVLVRVHSECLTGDVFG MLBr_00559|M.leprae_Br4923 FRAIGYTSIYDD--VKHVALVRGEIAGSSGDGDDILVRVHSECLTGDVFG MAB_2796c|M.abscessus_ATCC_199 FRAVGYTSIYDD--VEHVALVLGDISGPDGDGNDVLVRVHSECLTGDVFG Mflv_3257|M.gilvum_PYR-GCK LVTRSDLEVFLPPIGGQTIYIFGDPRDLADPSVELTARVHDECNGSDVFG Mvan_2974|M.vanbaalenii_PYR-1 LVTRSDLDVFLPPIGGQTIYVFGDPRALADPGVELTARVHDECNGSDVFG MSMEG_3471|M.smegmatis_MC2_155 LVTRSDLEVFLPPIGGQTLYIFGNARDLADSSVELTARVHDECNGSDVFG TH_0344|M.thermoresistible__bu FQAIAYQSETGEH--EHLALVRGDLEQLHDLPEGVLTRIHSECLTGDVVG : : . . : : *: : .*:*.** .**.* MMAR_2222|M.marinum_M SRRCDCGPQLDAAMAMVAR----EGRGVVLYMRGHEGRGIGLLHKLQAY- MUL_1809|M.ulcerans_Agy99 SRRCDCGSQLDAAMAMVAR----EGRGVVLYMRGHEGRGIGLLHKLQTY- MAV_3365|M.avium_104 SRRCDCGPQLDAAMAMVAR----EGRGIVLYMRGHEGRGIGLMHKLQAY- Mb1450|M.bovis_AF2122/97 SRRCDCGPQLDAALAMVAR----EGRGVVLYMRGHEGRGIGLMHKLQAY- Rv1415|M.tuberculosis_H37Rv SRRCDCGPQLDAALAMVAR----EGRGVVLYMRGHEGRGIGLMHKLQAY- MLBr_00559|M.leprae_Br4923 SRRCDCGTQLDAAMAMVAR----EGRGVVLYMRGHEGRGIGLMHKLQAY- MAB_2796c|M.abscessus_ATCC_199 SRRCDCGPQLDAAMEMVAK----EGRGIVLYMRGHEGRGIGLMHKLQAY- Mflv_3257|M.gilvum_PYR-GCK SDICTCRPYLTHAIEECIQGAQRGGVGLIAYSR-KEGRALGEVTKFLVYN Mvan_2974|M.vanbaalenii_PYR-1 SDICTCRPYLTHAIEECIQGAQRGGVGLVAYFR-KEGRALGEVTKFLVYN MSMEG_3471|M.smegmatis_MC2_155 SDICTCRPYLTHAIEECIRGAQRGGVGLVAYSR-KEGRALGEVTKFLVYN TH_0344|M.thermoresistible__bu SLRCDCGAQLDAAIAALAA----EPAGVLIYLRGQEGRGIGLGPKLCAY- * * * . * *: *:: * * :***.:* *: .* MMAR_2222|M.marinum_M -QLQDAGDDTVDANLK----LGLPADARDYGIGAQILVDLGVRSMR-LLT MUL_1809|M.ulcerans_Agy99 -QLQDAGDDTVDANLK----LGLPADARDYGIGAQILVDLGVRSMR-LLT MAV_3365|M.avium_104 -QLQDAGEDTVDANLK----LGFPADARDYGIGAQILVDLGVRSMR-LLT Mb1450|M.bovis_AF2122/97 -QLQDAGADTVDANLK----LGLPADARDYGIGAQILVDLGVRSMR-LLT Rv1415|M.tuberculosis_H37Rv -QLQDAGADTVDANLK----LGLPADARDYGIGAQILVDLGVRSMR-LLT MLBr_00559|M.leprae_Br4923 -QLQDAGADTVDANIK----LGFPSDARDYGIGAQILVDLGVRSMR-LLT MAB_2796c|M.abscessus_ATCC_199 -QLQDAGEDTVDANLK----LGLPADARDYGLGAQILVDLGVKSMR-LLT Mflv_3257|M.gilvum_PYR-GCK ARKRQVGGDTADQYFARTECVAGVQDMRFQELMPDVLHWLGIRTIHRLVS Mvan_2974|M.vanbaalenii_PYR-1 ARKRQAGGDTADQYFARTECVAGVQDMRFQELMPDVLHWLGIRKIHRFVS MSMEG_3471|M.smegmatis_MC2_155 ARKRQAGGDTADQYFARTECVAGVQDMRFQELMPDVLHWLGIRKIHRLVS TH_0344|M.thermoresistible__bu -ALQEAGLDTVDANRA----LGLPVDCRDYGVAAAILHHLGIRRVR-LIT ::.* **.* :. * * : . :* **:: :: ::: MMAR_2222|M.marinum_M NNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDRMGHDLTGLDD MUL_1809|M.ulcerans_Agy99 NNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDRMGHDLTGLDD MAV_3365|M.avium_104 NNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDKMGHDLAGLDD Mb1450|M.bovis_AF2122/97 NNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDKLGHDLAGLDD Rv1415|M.tuberculosis_H37Rv NNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDKLGHDLAGLDD MLBr_00559|M.leprae_Br4923 NNPAKRVGLDGYGLQIIERVPLPVRANADNIRYLMTKRDKMGHDLGGLDD MAB_2796c|M.abscessus_ATCC_199 NNPAKRVGLDGYGLHIIERVPLPVRANSENIRYLRTKRDRMGHDLADLDD Mflv_3257|M.gilvum_PYR-GCK MSNMKYDAITGSGIEVGERVSIPDELIPADAQVEIDAKTAAGYYTAGVVP Mvan_2974|M.vanbaalenii_PYR-1 MSNMKYDAITGSGIEIGERVSIPDDLIPADAQVEIDAKMAAGYYTPGQVP MSMEG_3471|M.smegmatis_MC2_155 MSNMKYDAIVGSGIEVGERINIPEELIPADARVEIDAKMAAGYFTPGPVP TH_0344|M.thermoresistible__bu NNGAKSAALSRHGVEVSSTVHHPPHVTADNVSYLQTKRDRMGHLLPATLP . * .: *:.: . : * . : : *: MMAR_2222|M.marinum_M FHESVHLPGEFGGAL----------------- MUL_1809|M.ulcerans_Agy99 FHESVHLPGEFGGAL----------------- MAV_3365|M.avium_104 FHESVHLPGEFGGAL----------------- Mb1450|M.bovis_AF2122/97 FHESVHLPGEFGGAL----------------- Rv1415|M.tuberculosis_H37Rv FHESVHLPGEFGGAL----------------- MLBr_00559|M.leprae_Br4923 FHESNYFPGEFGGAL----------------- MAB_2796c|M.abscessus_ATCC_199 HPEAD-------GA------------------ Mflv_3257|M.gilvum_PYR-GCK DTDELKKAKGRGLQP----------------- Mvan_2974|M.vanbaalenii_PYR-1 GADELKKPKGRGLHG----------------- MSMEG_3471|M.smegmatis_MC2_155 DAEELKIAKGRELA------------------ TH_0344|M.thermoresistible__bu VPAEPDPIRLTPSNPSTSDDKPLINTVRKVAP