For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_3250 (-)

annotation: ABC transporter, ATP-binding protein
coordinates: 3333243 - 3334097
length: 284

MTEPPQVAEEVIEDLAGVHREINAAEGEILLQTHDLTVKFGGLVALDSVNFGIRRGEILGLIGPNGAGKT
TCFNAITGVYRPSSGSVTFDGAPLGRIKRHQITRRGIARTFQNIRLFGEMTALENVMVGTDARHRTSVPG
ALIRSPRHFREERSAVERSAALLHFVGIAHRGEEKAKNLSYGDQRRLEIARALATEPKLLCLDEPAAGFN
PSEKAALIDLIRKIRDDGYTVLLIEHDMRLVMGVTDRIVVLEFGRKIADGLPSQIREDPKVIAAYLGVPD
DEIR
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_3250--100% (284)ABC transporter, ATP-binding protein
M. smegmatis MC2 155MSMEG_1218-8e-4437.15% (253) ABC-type transport system ATP-binding protein II
M. smegmatis MC2 155MSMEG_6877-3e-3934.66% (251) branched-chain amino acid transport system ATP-binding protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2419ccysA13e-2932.11% (246) sulfate-transport ATP-binding protein ABC transporter CysA1
M. gilvum PYR-GCKMflv_3571-1e-14389.40% (283) ABC transporter related
M. tuberculosis H37RvRv2397ccysA14e-2932.11% (246) sulfate-transport ATP-binding protein ABC transporter CysA1
M. leprae Br4923MLBr_02352-6e-2629.96% (227) putative antibiotic resistance efflux protein
M. abscessus ATCC 19977MAB_2623c-1e-11276.25% (261) branched chain amino acid ABC transporter
M. marinum MMMAR_3715cysA17e-2932.52% (246) sulfate-transport ATP-binding protein ABC transporter CysA1
M. avium 104MAV_1785-2e-2931.89% (254) sulfate/thiosulfate import ATP-binding protein CysA
M. thermoresistible (build 8)TH_3313-1e-13789.71% (272) PUTATIVE ABC transporter related
M. ulcerans Agy99MUL_3658cysA16e-2932.52% (246) sulfate-transport ATP-binding protein ABC transporter CysA1
M. vanbaalenii PYR-1Mvan_2844-1e-14290.91% (275) ABC transporter-related protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb2419c|M.bovis_AF2122/97           -------------------------MT---------------YAIVVADA
Rv2397c|M.tuberculosis_H37Rv        -------------------------MT---------------YAIVVADA
MMAR_3715|M.marinum_M               -------------------MKKETSLTGPGT---------GGHAIVVRDA
MUL_3658|M.ulcerans_Agy99           -------------------------MTGPGT---------GGHAIVVRDA
MAV_1785|M.avium_104                -------------------------MTDAGTD-------RGDIAITVRDA
Mflv_3571|M.gilvum_PYR-GCK          MTEP------------EAFEDAVAEIAGVHR---EIRADEGEVLLQTNEL
Mvan_2844|M.vanbaalenii_PYR-1       MTAPDNDAT--AETALENFEDSVADIAGVHR---EIQAEEGEVLLQTTDL
MSMEG_3250|M.smegmatis_MC2_155      MTEPP-----------QVAEEVIEDLAGVHR---EINAAEGEILLQTHDL
TH_3313|M.thermoresistible__bu      --------------------MSIEELAGVHR---DIRAAEGEILLETVDL
MAB_2623c|M.abscessus_ATCC_199      MTKHRDSSLDDEQDSVEMLQAEIEEGSDEGESGVPVDPGEAEVLLEVKDL
MLBr_02352|M.leprae_Br4923          -------------------------MRNNDK----------AVMVRGVRK
                                                                                :     

Mb2419c|M.bovis_AF2122/97           TKRYGDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGT
Rv2397c|M.tuberculosis_H37Rv        TKRYGDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGT
MMAR_3715|M.marinum_M               FKQYGDFVALDHVDFVVPAGSLTALLGPSGSGKSTLLRTIAGLDQPDSGN
MUL_3658|M.ulcerans_Agy99           FKQYGDFVALDHVDFVVPAGSLTALLGPSGSGKSTLLRTIAGLDQPDSGN
MAV_1785|M.avium_104                YKRYGDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGT
Mflv_3571|M.gilvum_PYR-GCK          TVKFGGLTALDAVTFNIRRGEILGLIGPNGAGKTTCFNAITGVYRPTSGS
Mvan_2844|M.vanbaalenii_PYR-1       TVKFGGLTALDAVTFNIRRGEILGLIGPNGAGKTTCFNAITGVYRPTSGI
MSMEG_3250|M.smegmatis_MC2_155      TVKFGGLVALDSVNFGIRRGEILGLIGPNGAGKTTCFNAITGVYRPSSGS
TH_3313|M.thermoresistible__bu      TVKFGGLVALDSVSFNIRRGEILGLIGPNGAGKTTCFNAITGVYRPASGA
MAB_2623c|M.abscessus_ATCC_199      TLKFGGLQALDGVSFDIRRGEILGLVGPNGAGKTTCFNAITGVYKPTSGS
MLBr_02352|M.leprae_Br4923          TYGKGKIIALDDVSFDVDRGEVIGLLGPNGAGKTTMVDILSTLTRPDRGL
                                        * : *** * * :  *.: .*:**.*:**:* .  :: : :*  * 

Mb2419c|M.bovis_AF2122/97           ITING---RDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAFGLKIRK--
Rv2397c|M.tuberculosis_H37Rv        ITING---RDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAFGLKIRK--
MMAR_3715|M.marinum_M               ITING---RDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAYGLKIRK--
MUL_3658|M.ulcerans_Agy99           ITING---RDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAYGLKIRK--
MAV_1785|M.avium_104                VTIYG---RDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAYGLKVRK--
Mflv_3571|M.gilvum_PYR-GCK          VTFDGSTIGRIKRHQITRLGIARTFQNIRLFGEMTALENVMVGTDARHHT
Mvan_2844|M.vanbaalenii_PYR-1       VTFDGAPIGRIKRHQITRLGIARTFQNIRLFGEMTALENVMVGTDARHHT
MSMEG_3250|M.smegmatis_MC2_155      VTFDGAPLGRIKRHQITRRGIARTFQNIRLFGEMTALENVMVGTDARHRT
TH_3313|M.thermoresistible__bu      VIFDGQKLGRIKRHQITRLGIARTFQNIRLWGEMTALENVVVGTDARHKT
MAB_2623c|M.abscessus_ATCC_199      IVFNGKPLRRLRRHQITRRGIARTFQNIRLFGEMTALENVAVGTDARHKT
MLBr_02352|M.leprae_Br4923          ATVAG--YDVVSEPAGVRRSIMVTGQQVAVDDQLSGEQNLILFGRLYG--
                                      . *     : .    * .*  . *:     .::  :*:          

Mb2419c|M.bovis_AF2122/97           ----------RPKAEIKAKVDN---LLQVVGLSGFQSRYPNQLSGGQRQR
Rv2397c|M.tuberculosis_H37Rv        ----------RPKAEIKAKVDN---LLQVVGLSGFQSRYPNQLSGGQRQR
MMAR_3715|M.marinum_M               ----------RPKAEIRDKVDN---LLEVVGLSGFHGRYPNQLSGGQRQR
MUL_3658|M.ulcerans_Agy99           ----------RPKAEIRDKVDN---LLEVVGLSGFHGRYPDQLSGGQRQR
MAV_1785|M.avium_104                ----------RPKAEIKAKVDN---LLEVVGLSGFQGRYPNQLSGGQRQR
Mflv_3571|M.gilvum_PYR-GCK          SVPGALIRSPRHRREERSAIERSAALLHFVGIAHRGEEKAKNLSYGDQRR
Mvan_2844|M.vanbaalenii_PYR-1       SVPGALIRSPRHRREERSAIERSAALLHFVGIAHRGEEKAKNLSYGDQRR
MSMEG_3250|M.smegmatis_MC2_155      SVPGALIRSPRHFREERSAVERSAALLHFVGIAHRGEEKAKNLSYGDQRR
TH_3313|M.thermoresistible__bu      SVPGALFRSPRHRREERSAIERATALLHFVGIAHRAEEKAKNLPYGDQRR
MAB_2623c|M.abscessus_ATCC_199      SVLGALLRTPRHRREEHYAVDVGMGLLDFVGIADDADVKAKNLPYGSQRR
MLBr_02352|M.leprae_Br4923          ----------LSKSVARVRTQE---LLEQFDLLHAGKRRVGTYSGGMRRR
                                                    :   :    **. ..:           . * ::*

Mb2419c|M.bovis_AF2122/97           MALARALAVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEVHVTTVLVT
Rv2397c|M.tuberculosis_H37Rv        MALARALAVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEVHVTTVLVT
MMAR_3715|M.marinum_M               MALARALAVDPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVT
MUL_3658|M.ulcerans_Agy99           MALARALAVDPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVT
MAV_1785|M.avium_104                MALARALAVDPQVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVT
Mflv_3571|M.gilvum_PYR-GCK          LEIARALATEPKLLCLDEPAAGFNPSEKSALIDLIRKIRDDG-YTVLLIE
Mvan_2844|M.vanbaalenii_PYR-1       LEIARALATEPKLLCLDEPAAGFNPSEKSALIELIRKIRDDG-YTVLLIE
MSMEG_3250|M.smegmatis_MC2_155      LEIARALATEPKLLCLDEPAAGFNPSEKAALIDLIRKIRDDG-YTVLLIE
TH_3313|M.thermoresistible__bu      LEIARALATEPKLLCLDEPAAGFNPSEKAALIDLIRKIRDDG-YTVLLIE
MAB_2623c|M.abscessus_ATCC_199      LEIARALATEPKLLCLDEPAAGFTPSEKDSLIELIQRIRDYG-YTVLLIE
MLBr_02352|M.leprae_Br4923          IDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVASFKQIG-IATLLTT
                                    : :* .*..:*::  ****  .: .  :  :   :  :::    :.:*  

Mb2419c|M.bovis_AF2122/97           HDQAEALDVADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLGAVSTLN
Rv2397c|M.tuberculosis_H37Rv        HDQAEALDVADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLGAVSTLN
MMAR_3715|M.marinum_M               HDQAEALDVADRIAVLNSGRIEQVGSPTEVYDAPANAFVMSFLGAVSALN
MUL_3658|M.ulcerans_Agy99           HDQAEALDVADRIAVLNSGRIEQVGSPTEVYDAPTNAFVMSFLGAVSALN
MAV_1785|M.avium_104                HDQAEALDVADRIAVLNQGRIEQIGSPTEVYDAPTNAFVMSFLGAVSTLN
Mflv_3571|M.gilvum_PYR-GCK          HDMRLVMGVTDRIVVLEFGRKIADGLPSEIREDPK--VIAAYLGVPDDEL
Mvan_2844|M.vanbaalenii_PYR-1       HDMRLVMGVTDRIVVLEFGRKIADGLPAEIREDPK--VIAAYLGVPDDEL
MSMEG_3250|M.smegmatis_MC2_155      HDMRLVMGVTDRIVVLEFGRKIADGLPSQIREDPK--VIAAYLGVPDDEI
TH_3313|M.thermoresistible__bu      HDMKLVMGVTDRIVVLEFGRKIADGPPAAIREDPA--VIAAYLGVPDDEI
MAB_2623c|M.abscessus_ATCC_199      HDMKLVMGVTDRIVVLEFGRKIADGLPAEVRNDPA--VIEAYLGVADEDF
MLBr_02352|M.leprae_Br4923          QYLEEADELSDRIILIDHGTVIAEGTASELKHRVGETFCEIVPRDLKDLG
                                    :    .  ::*** ::. *     * .: : .     .        .   

Mb2419c|M.bovis_AF2122/97           GSLVRPHDIRVGRTPNMAVAAADGTAGSTGVLRAVVDRVVVLGFEVRVEL
Rv2397c|M.tuberculosis_H37Rv        GSLVRPHDIRVGRTPNMAVAAADGTAGSTGVLRAVVDRVVVLGFEVRVEL
MMAR_3715|M.marinum_M               GALVRPHDIRVGRTPEMAVAAADGTGESTGVTRAVVDRIVVLGFEVRVEL
MUL_3658|M.ulcerans_Agy99           GALVRPHDIRVGRTPEMAVAAADGTGESTGVTRAVVDRIVVLGFEVRVEL
MAV_1785|M.avium_104                GTLVRPHDIRVGRTPEMAVAAEDGTAESTGVARAIVDRVVKLGFEVRVEL
Mflv_3571|M.gilvum_PYR-GCK          A-------------------------------------------------
Mvan_2844|M.vanbaalenii_PYR-1       T-------------------------------------------------
MSMEG_3250|M.smegmatis_MC2_155      R-------------------------------------------------
TH_3313|M.thermoresistible__bu      G-------------------------------------------------
MAB_2623c|M.abscessus_ATCC_199      HGPGWLDSAPPDSESER---------------------------------
MLBr_02352|M.leprae_Br4923          TVVAALGSLLPERSRAMLTPTSDRITMPAPDGTQTLIEAARRIDEVSVEL
                                                                                      

Mb2419c|M.bovis_AF2122/97           TSAATGGAFTAQITRGDAEALALREGDTVYVRATRVPPIAG---GVSGVD
Rv2397c|M.tuberculosis_H37Rv        TSAATGGAFTAQITRGDAEALALREGDTVYVRATRVPPIAG---GVSGVD
MMAR_3715|M.marinum_M               TSAATGGAFTAQITRGDAEALALQEGDTVYVRATRVPPIAG---AAPAVP
MUL_3658|M.ulcerans_Agy99           TSAATGGAFTAQITRGDAEALALQEGDTVYVRATRVPPIAG---AAPAVP
MAV_1785|M.avium_104                TSAATGGPFTAQITRGDAEALALREGDTVYVRATRVPPITAGATTVPAVS
Mflv_3571|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_2844|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_3250|M.smegmatis_MC2_155      --------------------------------------------------
TH_3313|M.thermoresistible__bu      --------------------------------------------------
MAB_2623c|M.abscessus_ATCC_199      --------------------------------------------------
MLBr_02352|M.leprae_Br4923          ADIALR----------------RPSLDDVFLSMTTDPSESLSHLAAGAMR
                                                                                      

Mb2419c|M.bovis_AF2122/97           DAGVERVKVTST------
Rv2397c|M.tuberculosis_H37Rv        DAGVERVKVTST------
MMAR_3715|M.marinum_M               DDGAGSTPSAAQIGVGGQ
MUL_3658|M.ulcerans_Agy99           DDGAGSTPRAAQIGVGGQ
MAV_1785|M.avium_104                RDGADEATLTSA------
Mflv_3571|M.gilvum_PYR-GCK          ------------------
Mvan_2844|M.vanbaalenii_PYR-1       ------------------
MSMEG_3250|M.smegmatis_MC2_155      ------------------
TH_3313|M.thermoresistible__bu      ------------------
MAB_2623c|M.abscessus_ATCC_199      ------------------
MLBr_02352|M.leprae_Br4923          ------------------