For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TETAVSTGTQESVEDFAARARAWLAGNMPRIDPDNPPFSVRADQESWDRAKELQKRLYQGGFAGICFPRE YGGLGLDHAYQRAFNAEARCYEMPLILNTPSFTICAATILDMGSEQQKRDRIGAAIRGEEILVQLLSEPS GGSDLAGVITRADRVGDKWVINGAKTWSTSAFAGDYGLMLARTNWDVPKHEGLTMFLVPLKAPGITMRRI KEVNGNEEFCEEFFDNLELGDDAVVGKVDDGWTVASRQLFHERRAVGGGSEFASGTGAENANEMPPDHVG LAEALGRADDPFVQDLAGRALVRRAVKTQLIDHVTQAIAAGALPPTAGTLIRLFHAETTELEVDTALAIA GTAGVVDEGGDFDGMLDIGVRYLSRQTGSLGGGSSEMARNVIGERVLGFPREHAADRGVPFREVKRNKG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_2992 | - | - | 100% (420) | putative acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_1904 | - | 2e-52 | 31.68% (404) | acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_6584 | - | 2e-48 | 33.60% (369) | acyl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3590c | fadE30 | 2e-46 | 32.41% (395) | acyl-CoA dehydrogenase FADE30 |
M. gilvum PYR-GCK | Mflv_3794 | - | 0.0 | 83.10% (426) | acyl-CoA dehydrogenase domain-containing protein |
M. tuberculosis H37Rv | Rv3560c | fadE30 | 2e-46 | 32.41% (395) | acyl-CoA dehydrogenase FADE30 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 2e-13 | 26.32% (209) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_3122 | - | 9e-45 | 31.30% (377) | putative acyl-CoA dehydrogenase |
M. marinum M | MMAR_3992 | - | 1e-162 | 68.23% (406) | acyl-CoA dehydrogenase |
M. avium 104 | MAV_1620 | - | 1e-171 | 71.22% (410) | acyl-CoA dehydrogenase middle domain-containing protein |
M. thermoresistible (build 8) | TH_4121 | - | 1e-175 | 70.59% (425) | PUTATIVE acyl-CoA dehydrogenase domain protein |
M. ulcerans Agy99 | MUL_3854 | - | 1e-159 | 67.49% (406) | acyl-CoA dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_2600 | - | 0.0 | 83.22% (423) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb3590c|M.bovis_AF2122/97 ---------------MQDVEEFRAQVRGWLADNLAG----EFAALKGLGG Rv3560c|M.tuberculosis_H37Rv ---------------MQDVEEFRAQVRGWLADNLAG----EFAALKGLGG MAB_3122|M.abscessus_ATCC_1997 ----------------MPVTSSEPSSAGSNALHTSGSSQRDRVAAAAHEV Mflv_3794|M.gilvum_PYR-GCK --MTETMTSTESTGTVETVEQFAARARTWLAENMPSID-----PDNPPFS Mvan_2600|M.vanbaalenii_PYR-1 --MTDTMTSTETT---ESVADFAARARTWLAENMPSID-----PDDPPFS MSMEG_2992|M.smegmatis_MC2_155 --MTETAVSTGTQ---ESVEDFAARARAWLAGNMPRID-----PDNPPFS MMAR_3992|M.marinum_M ------------MTAVESVAEFATRARKWLAANMSQID-----PLSPPEA MUL_3854|M.ulcerans_Agy99 ------------MTAVESVAEFATRARKWLAANMSQID-----PLSPPEA MAV_1620|M.avium_104 -------------MTTESVAQFAARARAWLADNMPAID-----RESPPPA TH_4121|M.thermoresistible__bu MTETTTTSQGRPAEITETVEEFAARARAWLAESMPRID-----PDNPPNA MLBr_00737|M.leprae_Br4923 -------MVGWSGNPLFDLFKLPEEHNELRATIRALAE-----KEIAPHA : . * . Mb3590c|M.bovis_AF2122/97 PGREHEAFEERRAWNQRLAAAGLTCLGWPEEHGGRGLSTAHRVAFYEEYA Rv3560c|M.tuberculosis_H37Rv PGREHEAFEERRAWNQRLAAAGLTCLGWPEEHGGRGLSTAHRVAFYEEYA MAB_3122|M.abscessus_ATCC_1997 LAKHPPATTPVTDLLGAVYDAGLAWVHFPVGLGGLDAPPALQAVSDTILR Mflv_3794|M.gilvum_PYR-GCK VRADQESWDRAKELQKRLYEGGFAGICFPREYGGLGLDYAYQRAFNAECR Mvan_2600|M.vanbaalenii_PYR-1 VRAEQSSWDRAMELQKRLYEGGFAGICFPREYGGLGLDHAYQKAFNAECR MSMEG_2992|M.smegmatis_MC2_155 VRADQESWDRAKELQKRLYQGGFAGICFPREYGGLGLDHAYQRAFNAEAR MMAR_3992|M.marinum_M PRDDEASWQRARQLQRRLHDGGFAGICFPREYGGQGLAYEYQRAFDEESL MUL_3854|M.ulcerans_Agy99 PRDDEASWQRARQLQRRPNDGGFAGICFPREYGGQGLAYEYQRAFDEESL MAV_1620|M.avium_104 PRDDERAWRRARELQKRLYDGGFAGICFPREYGGLGLDYEYQKAFDAESL TH_4121|M.thermoresistible__bu DRGEEEPWLRARELQKRLYEGGFAGICFPREYGGLGLPYEYQKAFDAETA MLBr_00737|M.leprae_Br4923 ADVDQRARFP-EEALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVA . . .*: : * ** . Mb3590c|M.bovis_AF2122/97 RADAPD--KVNHFGEELLGPTLIAFGTPQQQRRFLPRIRDVTELWCQGYS Rv3560c|M.tuberculosis_H37Rv RADAPD--KVNHFGEELLGPTLIAFGTPQQQRRFLPRIRDVTELWCQGYS MAB_3122|M.abscessus_ATCC_1997 AAGVPDPLFVNVIGYGMAAPTVLAHGQPELIRRILRPLFTGEELWCQLFS Mflv_3794|M.gilvum_PYR-GCK SYEMPL--ILNVPTFTICAATILDMGTEDQKRDRISAAVRGDEILCQLLS Mvan_2600|M.vanbaalenii_PYR-1 CYEMPL--ILNVPTFTICAATILDMGSEAQKRDRISAAIRGDEILCQLLS MSMEG_2992|M.smegmatis_MC2_155 CYEMPL--ILNTPSFTICAATILDMGSEQQKRDRIGAAIRGEEILVQLLS MMAR_3992|M.marinum_M HYEMPL--ILNVPTFTICCATLLDTGSESQKKRHIAAALRGEEVLVQLLS MUL_3854|M.ulcerans_Agy99 HYEMPL--ILNVPTFTICCATLLDTGSENQKKRHIAAALRGEEVLVQLLS MAV_1620|M.avium_104 DYEMPL--ILNTPTFTICCATLLDTGSEQQKKQHIAAALRGEEILVQLLS TH_4121|M.thermoresistible__bu EYELPL--ILNTPTFTICCATILDTGSEQQKRKHISAAIRGDEVLVQLLS MLBr_00737|M.leprae_Br4923 RVDASAS--LIPAVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALS . : : :: * : : : * Mb3590c|M.bovis_AF2122/97 EPGAGSDLASVATTAELDGDQWVINGQKVWTSLAHLSQWCFVLARTEKGS Rv3560c|M.tuberculosis_H37Rv EPGAGSDLASVATTAELDGDQWVINGQKVWTSLAHLSQWCFVLARTEKGS MAB_3122|M.abscessus_ATCC_1997 EPGAGSDLAGLATRAVRDGDEWVINGQKVWTSGAHQARWALLVARSNPDV Mflv_3794|M.gilvum_PYR-GCK EPSGGSDLAGVITRADKQGDTWIINGAKTWSTSAFAADYGLLLARTDWTV Mvan_2600|M.vanbaalenii_PYR-1 EPSGGSDLAGVITRAERNGDKWIINGAKTWSTSAFAADYGLLLARTDWTV MSMEG_2992|M.smegmatis_MC2_155 EPSGGSDLAGVITRADRVGDKWVINGAKTWSTSAFAGDYGLMLARTNWDV MMAR_3992|M.marinum_M EPSGGSDLAGVLTRAERQGDRWVINGAKTWSTSAFAADYGLCLARTNWDV MUL_3854|M.ulcerans_Agy99 EHSGGSDLAGVLTRAERQGDRWVINGAKTWSTSAFAADYGLCLARTNWDV MAV_1620|M.avium_104 EPSGGSDLAGVLTRAERRGDRWIINGAKTWSTSAFAADYGLCLARTNWDV TH_4121|M.thermoresistible__bu EPSGGSDLAGVITRADRRGDKWVINGAKTWSTSAFAADYGLLLARTNWDV MLBr_00737|M.leprae_Br4923 EREAGSDAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPD- * .*** *.: * * ** *::** * * : . . : :* :: Mb3590c|M.bovis_AF2122/97 QRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTDADLVV Rv3560c|M.tuberculosis_H37Rv QRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTDADLVV MAB_3122|M.abscessus_ATCC_1997 AKHRGLTYFVVDMTDPGVEVRPLRQMTGD--AEFNEVYLTDVRIPDAHRL Mflv_3794|M.gilvum_PYR-GCK PKHEGLTMFLVPLDSPGITMRRIKEVNGN--EEFCEEFFDGLELGADAVV Mvan_2600|M.vanbaalenii_PYR-1 PKHEGLTMFLVPLNAPGITMRRIKEVNGN--EEFCEEFFDGLELGDDAVV MSMEG_2992|M.smegmatis_MC2_155 PKHEGLTMFLVPLKAPGITMRRIKEVNGN--EEFCEEFFDNLELGDDAVV MMAR_3992|M.marinum_M PKHDGLTMFLVPINHPGITLRRITQVNGS--TEFCEEFLDGVDVGDDAVV MUL_3854|M.ulcerans_Agy99 PKHDGLTMFLVPINHPGITLRRITQVNGS--TEFCEEFLDSVDVGDDAVV MAV_1620|M.avium_104 PKHEGLTMFLVPINHPGITLRRITMLSGS--TEFCEEFLDGVDVGDDAVV TH_4121|M.thermoresistible__bu PKHEGLTMFLVPLDAPGITMRRIKQVDGG--NEFCEEFFDNVEVGDDAVV MLBr_00737|M.leprae_Br4923 KGANGISAFIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRII *:: ::* *. : * * :: : Mb3590c|M.bovis_AF2122/97 GAPGDGWRVAMATLTFERGVSTLGQQIVYAR-------ELSNLVELARRT Rv3560c|M.tuberculosis_H37Rv GAPGDGWRVAMATLTFERGVSTLGQQIVYAR-------ELSNLVELARRT MAB_3122|M.abscessus_ATCC_1997 GNEGDGWRVSMTTLMNER--SALGGAFDHGRGG----GSIGNALNLWKQR Mflv_3794|M.gilvum_PYR-GCK GEVNKGWEVATRQLHHERRAVGGGSEFASGTAAENASEMPPDHVGLAEAT Mvan_2600|M.vanbaalenii_PYR-1 GEVNKGWEVATRQLHHERRAVGGGSEFASGTAAENASEMPPDHVGLARAT MSMEG_2992|M.smegmatis_MC2_155 GKVDDGWTVASRQLFHERRAVGGGSEFASGTGAENANEMPPDHVGLAEAL MMAR_3992|M.marinum_M GEVNNGWTVASRQLYHERRAVGMGSEFASGAGSEGGHATPVDYVALAETT MUL_3854|M.ulcerans_Agy99 GEVNNGWTVASRQLYHERRAVGIGSEFASGAGSEGGHATPVDYVALAETT MAV_1620|M.avium_104 GEVNGGWAVASRQLYHERRAVGQGSEFASGGGSEGGHTIPVDYVSLAEKT TH_4121|M.thermoresistible__bu GEVDKGWEVASRQLYHERRAVGGGSEFASGIGAEGSTDQPVDYVALLAAT MLBr_00737|M.leprae_Br4923 GEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESI * . *: .: * * : : Mb3590c|M.bovis_AF2122/97 AAADDPLIRERLTRAWTGLRAMRSYALATMEGPAVEQPGQD--NVSKLLW Rv3560c|M.tuberculosis_H37Rv AAADDPLIRERLTRAWTGLRAMRSYALATMEGPAVEQPGQD--NVSKLLW MAB_3122|M.abscessus_ATCC_1997 PDLHTPELRAKLTNLFVRSEGNRYGTQMRIAAQGDAPMGPEG-SIGKLMG Mflv_3794|M.gilvum_PYR-GCK GQSDNPLVQDLAGRALVRRIVKEQLIDHVFRSITDGSLPPNAGTLIRLFH Mvan_2600|M.vanbaalenii_PYR-1 GQDGDPRVQDLAGRALVRRIVKEQLIDHVFRSIGNGSLPPNAGTLIRLFH MSMEG_2992|M.smegmatis_MC2_155 GRADDPFVQDLAGRALVRRAVKTQLIDHVTQAIAAGALPPTAGTLIRLFH MMAR_3992|M.marinum_M GQAHSDRVREMAGRALVHRAVCEQLIDHVYRSVRDGTLPPAAGTLIRLFH MUL_3854|M.ulcerans_Agy99 GQAHSDRVREMAGRALVHRAVCEQLIDHVYRSVRDGTLPPAAGTLIRLFH MAV_1620|M.avium_104 GQADDPRVQEMAGRVLVHRAVAEQLIGHVYRSVRDGALPPAAGTLIRLFH TH_4121|M.thermoresistible__bu GQSDSLRAQELAGRALVHRAVQDQLVEHVYHAVNDGTLPPAGGSIIRVTH MLBr_00737|M.leprae_Br4923 STFQSIQFMLADMAMKVEAARLIVYAAAARAERGEPDLGFIS-AASKCFA . : Mb3590c|M.bovis_AF2122/97 ANWHRNLGELAMDVIGKPGMTMP---------DGEFDEWQRLYLFTRADT Rv3560c|M.tuberculosis_H37Rv ANWHRNLGELAMDVIGKPGMTMP---------DGEFDEWQRLYLFTRADT MAB_3122|M.abscessus_ATCC_1997 AELNQQIYDFCVELLGIEATLYASYDMRRVVEDDRRADTMWAFLRSKANT Mflv_3794|M.gilvum_PYR-GCK AETTELEVDTALAIAGTAGVIDEGSDD--APELSGLLEIGVRYLSRQTGS Mvan_2600|M.vanbaalenii_PYR-1 AETTELEVDTALAIAGTAGVVDEGSDD--APGLTGLMDVGVRYLSRQTGS MSMEG_2992|M.smegmatis_MC2_155 AETTELEVDTALAIAGTAGVVDEGGD------FDGMLDIGVRYLSRQTGS MMAR_3992|M.marinum_M AETVMCEMDTSLAIAGSGGVVGQPGE---------GLQTGLRYLARQSVA MUL_3854|M.ulcerans_Agy99 AETVMCEMDTSLAIAGSGGVVGQPGE---------GLQTGLRYLARQSVA MAV_1620|M.avium_104 SETVTTDVDTALAIAGSAGVVGEPGA---------GLETGLRYLSRQTVA TH_4121|M.thermoresistible__bu AEHIQVEVDTALALAGSGGVVDDSRD---------LFRFGERYLSRQAAA MLBr_00737|M.leprae_Br4923 SDIAMEVTTDAVQLFGGAGYTSD-------------FPVERFMRDAKITQ :: .: : * . : Mb3590c|M.bovis_AF2122/97 IYGGSNEIQRNIIAERVLGLPREAKG------------------ Rv3560c|M.tuberculosis_H37Rv IYGGSNEIQRNIIAERVLGLPREAKG------------------ MAB_3122|M.abscessus_ATCC_1997 IEGGTSDVMRNIIGERVLGLPGDIRVDTDKAWKDVPRG------ Mflv_3794|M.gilvum_PYR-GCK LGGGSSEMARNVIGERILGFPRELAADKGIPFNEVKRN----KS Mvan_2600|M.vanbaalenii_PYR-1 LGGGSSEMARNVISERILGFPRELAADKGIPFNQVKRN----KS MSMEG_2992|M.smegmatis_MC2_155 LGGGSSEMARNVIGERVLGFPREHAADRGVPFREVKRN----KG MMAR_3992|M.marinum_M IGGGTTEMARNVIGERMLNFPREFAADRGVPFNQVRRG--PPR- MUL_3854|M.ulcerans_Agy99 IGGGPTEMARNVIGERMLNFPREFAADRGVSFNQVRRG--SPR- MAV_1620|M.avium_104 IGGGTTEMARNVIGERVLGFPREYAADRGVPFNQVRHGQRSDRS TH_4121|M.thermoresistible__bu LGGGTTEIARNIIAERILGFPREPAADRGMPFKDVKRN----RG MLBr_00737|M.leprae_Br4923 IYEGTNQIQRVVMSRALLR------------------------- : *..:: * ::.. :*